LOCUS AEE78369.1 1067 aa PRT PLN 23-MAR-2023
DEFINITION Arabidopsis thaliana glycine-tRNA ligase protein.
ACCESSION CP002686-6592
PROTEIN_ID AEE78369.1
SOURCE Arabidopsis thaliana (thale cress)
ORGANISM Arabidopsis thaliana
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
Pentapetalae; rosids; malvids; Brassicales; Brassicaceae;
Camelineae; Arabidopsis.
REFERENCE 1 (bases 1 to 23459830)
AUTHORS Salanoubat,M., Lemcke,K., Rieger,M., Ansorge,W., Unseld,M.,
Fartmann,B., Valle,G., Blocker,H., Perez-Alonso,M., Obermaier,B.,
Delseny,M., Boutry,M., Grivell,L.A., Mache,R., Puigdomenech,P., De
Simone,V., Choisne,N., Artiguenave,F., Robert,C., Brottier,P.,
Wincker,P., Cattolico,L., Weissenbach,J., Saurin,W., Quetier,F.,
Schafer,M., Muller-Auer,S., Gabel,C., Fuchs,M., Benes,V.,
Wurmbach,E., Drzonek,H., Erfle,H., Jordan,N., Bangert,S.,
Wiedelmann,R., Kranz,H., Voss,H., Holland,R., Brandt,P.,
Nyakatura,G., Vezzi,A., D'Angelo,M., Pallavicini,A., Toppo,S.,
Simionati,B., Conrad,A., Hornischer,K., Kauer,G., Lohnert,T.H.,
Nordsiek,G., Reichelt,J., Scharfe,M., Schon,O., Bargues,M.,
Terol,J., Climent,J., Navarro,P., Collado,C., Perez-Perez,A.,
Ottenwalder,B., Duchemin,D., Cooke,R., Laudie,M., Berger-Llauro,C.,
Purnelle,B., Masuy,D., de Haan,M., Maarse,A.C., Alcaraz,J.P.,
Cottet,A., Casacuberta,E., Monfort,A., Argiriou,A., flores,M.,
Liguori,R., Vitale,D., Mannhaupt,G., Haase,D., Schoof,H., Rudd,S.,
Zaccaria,P., Mewes,H.W., Mayer,K.F., Kaul,S., Town,C.D., Koo,H.L.,
Tallon,L.J., Jenkins,J., Rooney,T., Rizzo,M., Walts,A.,
Utterback,T., Fujii,C.Y., Shea,T.P., Creasy,T.H., Haas,B.,
Maiti,R., Wu,D., Peterson,J., Van Aken,S., Pai,G., Militscher,J.,
Sellers,P., Gill,J.E., Feldblyum,T.V., Preuss,D., Lin,X.,
Nierman,W.C., Salzberg,S.L., White,O., Venter,J.C., Fraser,C.M.,
Kaneko,T., Nakamura,Y., Sato,S., Kato,T., Asamizu,E., Sasamoto,S.,
Kimura,T., Idesawa,K., Kawashima,K., Kishida,Y., Kiyokawa,C.,
Kohara,M., Matsumoto,M., Matsuno,A., Muraki,A., Nakayama,S.,
Nakazaki,N., Shinpo,S., Takeuchi,C., Wada,T., Watanabe,A.,
Yamada,M., Yasuda,M. and Tabata,S.
CONSRTM European Union Chromosome 3 Arabidopsis Sequencing Consortium;
Institute for Genomic Research; Kazusa DNA Research Institute
TITLE Sequence and analysis of chromosome 3 of the plant Arabidopsis
thaliana
JOURNAL Nature 408 (6814), 820-822 (2000)
PUBMED 11130713
REFERENCE 2 (bases 1 to 23459830)
AUTHORS Swarbreck,D., Lamesch,P., Wilks,C. and Huala,E.
CONSRTM TAIR
TITLE Direct Submission
JOURNAL Submitted (18-FEB-2011) Department of Plant Biology, Carnegie
Institution, 260 Panama Street, Stanford, CA, USA
REFERENCE 3 (bases 1 to 23459830)
AUTHORS Krishnakumar,V., Cheng,C.-Y., Chan,A.P., Schobel,S., Kim,M.,
Ferlanti,E.S., Belyaeva,I., Rosen,B.D., Micklem,G., Miller,J.R.,
Vaughn,M. and Town,C.D.
TITLE Direct Submission
JOURNAL Submitted (17-MAY-2016) Plant Genomics, J. Craig Venter Institute,
9704 Medical Center Dr, Rockville, MD 20850, USA
REMARK Protein update by submitter
FEATURES Qualifiers
source /organism="Arabidopsis thaliana"
/mol_type="genomic DNA"
/db_xref="taxon:3702"
/chromosome="3"
/ecotype="Columbia"
protein /gene="EDD1"
/locus_tag="AT3G48110"
/gene_synonym="EDD"
/gene_synonym="EMBRYO-DEFECTIVE-DEVELOPMENT 1"
/gene_synonym="GLYCYL-TRNA SYNTHETASE"
/inference="Similar to RNA sequence,
EST:INSD:AV524028.1,INSD:BP811441.1,INSD:ES067244.1,
INSD:AV529831.1,INSD:EL207967.1,INSD:ES166053.1,
INSD:AV548408.1,INSD:EH834780.1,INSD:DR367109.1,
INSD:EH958014.1,INSD:EH921022.1,INSD:CB261655.1,
INSD:EH971471.1,INSD:EL076208.1,INSD:DR367108.1,
INSD:EL276241.1,INSD:AV815905.1,INSD:EL015166.1,
INSD:EL183994.1,INSD:EH945199.1,INSD:EH828009.1,
INSD:AV534293.1"
/inference="Similar to RNA sequence,
mRNA:INSD:BX823632.1,INSD:BT012191.1,INSD:AY136413.1"
/note="EMBRYO-DEFECTIVE-DEVELOPMENT 1 (EDD1); FUNCTIONS
IN: glycine-tRNA ligase activity; INVOLVED IN: regulation
of embryonic development, glycyl-tRNA aminoacylation,
embryo development ending in seed dormancy; LOCATED IN:
mitochondrion, chloroplast stroma, chloroplast; EXPRESSED
IN: 23 plant structures; EXPRESSED DURING: 13 growth
stages; CONTAINS InterPro DOMAIN/s: Glycyl-tRNA
synthetase, class IIc, beta subunit, N-terminal
(InterPro:IPR002311), Glycyl-tRNA synthetase, class II,
heterodimeric (InterPro:IPR006194), Glycyl-tRNA
synthetase, class IIc, beta subunit (InterPro:IPR015944),
Glycyl-tRNA synthetase, class IIc, alpha subunit
(InterPro:IPR002310); Has 11308 Blast hits to 11293
proteins in 1754 species: Archae - 4; Bacteria - 6864;
Metazoa - 4; Fungi - 1; Plants - 40; Viruses - 0; Other
Eukaryotes - 4395 (source: NCBI BLink)."
/db_xref="TAIR:AT3G48110"
/db_xref="Araport:AT3G48110"
intron_pos 82:0 (1/32)
intron_pos 170:1 (2/32)
intron_pos 189:0 (3/32)
intron_pos 215:0 (4/32)
intron_pos 240:0 (5/32)
intron_pos 263:2 (6/32)
intron_pos 302:2 (7/32)
intron_pos 336:2 (8/32)
intron_pos 379:0 (9/32)
intron_pos 407:0 (10/32)
intron_pos 436:0 (11/32)
intron_pos 470:0 (12/32)
intron_pos 491:1 (13/32)
intron_pos 510:0 (14/32)
intron_pos 534:0 (15/32)
intron_pos 561:2 (16/32)
intron_pos 578:0 (17/32)
intron_pos 599:0 (18/32)
intron_pos 629:0 (19/32)
intron_pos 658:0 (20/32)
intron_pos 682:0 (21/32)
intron_pos 701:2 (22/32)
intron_pos 733:0 (23/32)
intron_pos 806:0 (24/32)
intron_pos 837:2 (25/32)
intron_pos 868:0 (26/32)
intron_pos 903:0 (27/32)
intron_pos 916:0 (28/32)
intron_pos 946:0 (29/32)
intron_pos 980:0 (30/32)
intron_pos 1007:1 (31/32)
intron_pos 1036:0 (32/32)
BEGIN
1 MAILHFSLPL IVSFLRPHAS PRFFLLPRSL SQSPFLSRRR FHRTSAVSSA AVHHQSYRNP
61 DDDVTRAVSV PTFQQAIQRL QEYWASVGCA VMQPSNTEVG AGTMNPCTFL RVLGPEPWNV
121 AYVEPSIRPD DSRYGENPNR LQRHTQFQVI LKPDPGNSQQ LFINSLSALG IDVTAHDIRF
181 VEDNWESPVL GAWGLGWEIW MDGMEITQFT YFQQAGSLPL SPVSVEITYG LERIIMLLQE
241 VDHFKKILYA DGITYGELFL ENEKEMSSYY LEHASVDRLQ KHFDYFDEEA RSLLALGLPI
301 PAYDQLLKTS HAFNILDARG FIGVTERARY FGRMRSLARQ CAQLWLATRE SLGHPLGVAS
361 EPVPPVCHRA ALEKVAEKVS EDPRSFIIEI GTEEMPPQDV INASEQLRVL VLELLENQRL
421 RHGAVKAFGT PRRLVVLVDA MSSKQLEEEV EVRGPPASKA FDDEGNPTKA AEGFSRRYGV
481 PLEKLYRKVS GKTEYVHARV TEPARLALEV LSEDLPGILA KISFPKSMRW NSSVMFSRPI
541 RWVMALHGDL VVPFSFAGIS SGNVSCGLRN TASASLLVQN AESYEDTMRN SGINIEIEER
601 KKIILEKSNA LAKSVSGRLV VPQNLLNEVA NLVEAPVPLI GKFKESFLEL PEELLTIVMQ
661 KHQKYFSIID ESGQLLPYFI AVANGAINED VVKKGNEAVL RARYEDAKFF YEVDTRKRFS
721 EFRDQLQGIL FHEKLGTMLD KMNRLKKMVS KLCLALKIDE DLLPVVEDAA SLAMSDLATA
781 VVTEFTALSG IMARHYALRD GYSEQIAEAL LEITLPRFSG DVIPKTDAGM VLAIGDRLDS
841 LVGLFAAGCQ PSSTNDPFGL RRISYGLVQI LVEKDKNVNF KRVLELAASV QPTKVEANTV
901 EDVYQFVTRR LEQLLVDNGV SPEVVRSVLA ERGNNPCLAA RTAYKTEKLS KGEMFPKIVE
961 AYSRPTRIVR GKDVGVGVEV DENAFETPQE RTLWSTYTSI KDRIHTGIEI EDFTEISMQL
1021 VEPLEDFFNN VFVMVEEERV RKNRLALLNN IANLPKGVID LSFLPGF
//