LOCUS AEE78363.1 319 aa PRT PLN 23-MAR-2023
DEFINITION Arabidopsis thaliana RING/U-box superfamily protein protein.
ACCESSION CP002686-6586
PROTEIN_ID AEE78363.1
SOURCE Arabidopsis thaliana (thale cress)
ORGANISM Arabidopsis thaliana
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
Pentapetalae; rosids; malvids; Brassicales; Brassicaceae;
Camelineae; Arabidopsis.
REFERENCE 1 (bases 1 to 23459830)
AUTHORS Salanoubat,M., Lemcke,K., Rieger,M., Ansorge,W., Unseld,M.,
Fartmann,B., Valle,G., Blocker,H., Perez-Alonso,M., Obermaier,B.,
Delseny,M., Boutry,M., Grivell,L.A., Mache,R., Puigdomenech,P., De
Simone,V., Choisne,N., Artiguenave,F., Robert,C., Brottier,P.,
Wincker,P., Cattolico,L., Weissenbach,J., Saurin,W., Quetier,F.,
Schafer,M., Muller-Auer,S., Gabel,C., Fuchs,M., Benes,V.,
Wurmbach,E., Drzonek,H., Erfle,H., Jordan,N., Bangert,S.,
Wiedelmann,R., Kranz,H., Voss,H., Holland,R., Brandt,P.,
Nyakatura,G., Vezzi,A., D'Angelo,M., Pallavicini,A., Toppo,S.,
Simionati,B., Conrad,A., Hornischer,K., Kauer,G., Lohnert,T.H.,
Nordsiek,G., Reichelt,J., Scharfe,M., Schon,O., Bargues,M.,
Terol,J., Climent,J., Navarro,P., Collado,C., Perez-Perez,A.,
Ottenwalder,B., Duchemin,D., Cooke,R., Laudie,M., Berger-Llauro,C.,
Purnelle,B., Masuy,D., de Haan,M., Maarse,A.C., Alcaraz,J.P.,
Cottet,A., Casacuberta,E., Monfort,A., Argiriou,A., flores,M.,
Liguori,R., Vitale,D., Mannhaupt,G., Haase,D., Schoof,H., Rudd,S.,
Zaccaria,P., Mewes,H.W., Mayer,K.F., Kaul,S., Town,C.D., Koo,H.L.,
Tallon,L.J., Jenkins,J., Rooney,T., Rizzo,M., Walts,A.,
Utterback,T., Fujii,C.Y., Shea,T.P., Creasy,T.H., Haas,B.,
Maiti,R., Wu,D., Peterson,J., Van Aken,S., Pai,G., Militscher,J.,
Sellers,P., Gill,J.E., Feldblyum,T.V., Preuss,D., Lin,X.,
Nierman,W.C., Salzberg,S.L., White,O., Venter,J.C., Fraser,C.M.,
Kaneko,T., Nakamura,Y., Sato,S., Kato,T., Asamizu,E., Sasamoto,S.,
Kimura,T., Idesawa,K., Kawashima,K., Kishida,Y., Kiyokawa,C.,
Kohara,M., Matsumoto,M., Matsuno,A., Muraki,A., Nakayama,S.,
Nakazaki,N., Shinpo,S., Takeuchi,C., Wada,T., Watanabe,A.,
Yamada,M., Yasuda,M. and Tabata,S.
CONSRTM European Union Chromosome 3 Arabidopsis Sequencing Consortium;
Institute for Genomic Research; Kazusa DNA Research Institute
TITLE Sequence and analysis of chromosome 3 of the plant Arabidopsis
thaliana
JOURNAL Nature 408 (6814), 820-822 (2000)
PUBMED 11130713
REFERENCE 2 (bases 1 to 23459830)
AUTHORS Swarbreck,D., Lamesch,P., Wilks,C. and Huala,E.
CONSRTM TAIR
TITLE Direct Submission
JOURNAL Submitted (18-FEB-2011) Department of Plant Biology, Carnegie
Institution, 260 Panama Street, Stanford, CA, USA
REFERENCE 3 (bases 1 to 23459830)
AUTHORS Krishnakumar,V., Cheng,C.-Y., Chan,A.P., Schobel,S., Kim,M.,
Ferlanti,E.S., Belyaeva,I., Rosen,B.D., Micklem,G., Miller,J.R.,
Vaughn,M. and Town,C.D.
TITLE Direct Submission
JOURNAL Submitted (17-MAY-2016) Plant Genomics, J. Craig Venter Institute,
9704 Medical Center Dr, Rockville, MD 20850, USA
REMARK Protein update by submitter
FEATURES Qualifiers
source /organism="Arabidopsis thaliana"
/mol_type="genomic DNA"
/db_xref="taxon:3702"
/chromosome="3"
/ecotype="Columbia"
protein /locus_tag="AT3G48070"
/inference="Similar to RNA sequence,
EST:INSD:AI099827.1,INSD:EH871476.1,INSD:EL124651.1,
INSD:ES186317.1,INSD:EG458049.1,INSD:EL187261.1,
INSD:EL225318.1,INSD:EL249992.1,INSD:DR380328.1,
INSD:EL005071.1,INSD:EL309552.1,INSD:BX837842.1,
INSD:EL335052.1,INSD:AV556790.1,INSD:CK118418.1,
INSD:EL169998.1,INSD:Z47383.1,INSD:EL023362.1,
INSD:EL984516.1,INSD:EL154586.1,INSD:EG458050.1,
INSD:EH909974.1,INSD:T44881.1,INSD:EL266841.1,
INSD:ES198924.1,INSD:EH871971.1,INSD:EG480565.1,
INSD:EL133919.1,INSD:EL005050.1,INSD:AV555478.1,
INSD:ES092833.1,INSD:EL988000.1,INSD:EL015826.1,
INSD:BP864970.1,INSD:EL123934.1,INSD:EL133828.1,
INSD:EL154085.1,INSD:ES000854.1,INSD:DR349961.1,
INSD:EL183928.1,INSD:EL093480.1,INSD:Z47382.1,
INSD:ES215177.1,INSD:EL105205.1,INSD:T46343.1,
INSD:BE530764.1,INSD:EH981541.1,INSD:EL986629.1"
/inference="Similar to RNA sequence,
mRNA:INSD:BT026115.1,INSD:AK221778.1,INSD:BX826270.1,
INSD:AY084934.1,INSD:DQ059132.1"
/note="RING/U-box superfamily protein; FUNCTIONS IN: zinc
ion binding; LOCATED IN: chloroplast; EXPRESSED IN: 24
plant structures; EXPRESSED DURING: 15 growth stages;
CONTAINS InterPro DOMAIN/s: Zinc finger, RING-type
(InterPro:IPR001841); BEST Arabidopsis thaliana protein
match is: RING/U-box superfamily protein
(TAIR:AT5G62910.1); Has 516 Blast hits to 512 proteins in
181 species: Archae - 0; Bacteria - 1; Metazoa - 163;
Fungi - 134; Plants - 150; Viruses - 0; Other Eukaryotes -
68 (source: NCBI BLink)."
/db_xref="TAIR:AT3G48070"
/db_xref="Araport:AT3G48070"
intron_pos 26:0 (1/2)
intron_pos 48:1 (2/2)
BEGIN
1 MISDSITNAS ATSAPTARDF GKKKRTNRSA KLKQSKLGLR REQWLSQVAM INKGDKEEME
61 SNRRIGSEKP DQRDLPRPVE NLDEDNNGTH RHESFIESLS NSPNSILSGM NSIPNFSSSS
121 SSGSGGSCSG NITEEEDADD DGCLDDWEAI ADALAADDEK HEKENPPESC QEHEDIKQSA
181 LIGGADVVLR DAKADSQRRK QKSNQAWRPD DKLRPQGLPN LEKQRSFPVM NLHFSSVTVV
241 PSSCPICYED LDLTDSNFLP CPCGFRLCLF CHKTICDGDG RCPGCRKPYE RNTIKFEASV
301 QGGGLTIRLA RSSSMFCRS
//