LOCUS AEE78360.1 1613 aa PRT PLN 23-MAR-2023
DEFINITION Arabidopsis thaliana protein SUO protein.
ACCESSION CP002686-6580
PROTEIN_ID AEE78360.1
SOURCE Arabidopsis thaliana (thale cress)
ORGANISM Arabidopsis thaliana
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
Pentapetalae; rosids; malvids; Brassicales; Brassicaceae;
Camelineae; Arabidopsis.
REFERENCE 1 (bases 1 to 23459830)
AUTHORS Salanoubat,M., Lemcke,K., Rieger,M., Ansorge,W., Unseld,M.,
Fartmann,B., Valle,G., Blocker,H., Perez-Alonso,M., Obermaier,B.,
Delseny,M., Boutry,M., Grivell,L.A., Mache,R., Puigdomenech,P., De
Simone,V., Choisne,N., Artiguenave,F., Robert,C., Brottier,P.,
Wincker,P., Cattolico,L., Weissenbach,J., Saurin,W., Quetier,F.,
Schafer,M., Muller-Auer,S., Gabel,C., Fuchs,M., Benes,V.,
Wurmbach,E., Drzonek,H., Erfle,H., Jordan,N., Bangert,S.,
Wiedelmann,R., Kranz,H., Voss,H., Holland,R., Brandt,P.,
Nyakatura,G., Vezzi,A., D'Angelo,M., Pallavicini,A., Toppo,S.,
Simionati,B., Conrad,A., Hornischer,K., Kauer,G., Lohnert,T.H.,
Nordsiek,G., Reichelt,J., Scharfe,M., Schon,O., Bargues,M.,
Terol,J., Climent,J., Navarro,P., Collado,C., Perez-Perez,A.,
Ottenwalder,B., Duchemin,D., Cooke,R., Laudie,M., Berger-Llauro,C.,
Purnelle,B., Masuy,D., de Haan,M., Maarse,A.C., Alcaraz,J.P.,
Cottet,A., Casacuberta,E., Monfort,A., Argiriou,A., flores,M.,
Liguori,R., Vitale,D., Mannhaupt,G., Haase,D., Schoof,H., Rudd,S.,
Zaccaria,P., Mewes,H.W., Mayer,K.F., Kaul,S., Town,C.D., Koo,H.L.,
Tallon,L.J., Jenkins,J., Rooney,T., Rizzo,M., Walts,A.,
Utterback,T., Fujii,C.Y., Shea,T.P., Creasy,T.H., Haas,B.,
Maiti,R., Wu,D., Peterson,J., Van Aken,S., Pai,G., Militscher,J.,
Sellers,P., Gill,J.E., Feldblyum,T.V., Preuss,D., Lin,X.,
Nierman,W.C., Salzberg,S.L., White,O., Venter,J.C., Fraser,C.M.,
Kaneko,T., Nakamura,Y., Sato,S., Kato,T., Asamizu,E., Sasamoto,S.,
Kimura,T., Idesawa,K., Kawashima,K., Kishida,Y., Kiyokawa,C.,
Kohara,M., Matsumoto,M., Matsuno,A., Muraki,A., Nakayama,S.,
Nakazaki,N., Shinpo,S., Takeuchi,C., Wada,T., Watanabe,A.,
Yamada,M., Yasuda,M. and Tabata,S.
CONSRTM European Union Chromosome 3 Arabidopsis Sequencing Consortium;
Institute for Genomic Research; Kazusa DNA Research Institute
TITLE Sequence and analysis of chromosome 3 of the plant Arabidopsis
thaliana
JOURNAL Nature 408 (6814), 820-822 (2000)
PUBMED 11130713
REFERENCE 2 (bases 1 to 23459830)
AUTHORS Swarbreck,D., Lamesch,P., Wilks,C. and Huala,E.
CONSRTM TAIR
TITLE Direct Submission
JOURNAL Submitted (18-FEB-2011) Department of Plant Biology, Carnegie
Institution, 260 Panama Street, Stanford, CA, USA
REFERENCE 3 (bases 1 to 23459830)
AUTHORS Krishnakumar,V., Cheng,C.-Y., Chan,A.P., Schobel,S., Kim,M.,
Ferlanti,E.S., Belyaeva,I., Rosen,B.D., Micklem,G., Miller,J.R.,
Vaughn,M. and Town,C.D.
TITLE Direct Submission
JOURNAL Submitted (17-MAY-2016) Plant Genomics, J. Craig Venter Institute,
9704 Medical Center Dr, Rockville, MD 20850, USA
REMARK Protein update by submitter
FEATURES Qualifiers
source /organism="Arabidopsis thaliana"
/mol_type="genomic DNA"
/db_xref="taxon:3702"
/chromosome="3"
/ecotype="Columbia"
protein /gene="SUO"
/locus_tag="AT3G48050"
/gene_synonym="'shuttle' in chinese"
/inference="Similar to RNA sequence,
EST:INSD:AV521962.1,INSD:EL146342.1,INSD:EG462455.1,
INSD:EL033828.1,INSD:AV522237.1,INSD:EH853585.1,
INSD:EL149267.1,INSD:EL179445.1,INSD:EL088658.1,
INSD:AV442485.1,INSD:AV567711.1,INSD:BE526111.1,
INSD:EH942496.1,INSD:EH925139.1,INSD:EH884416.1,
INSD:EL250016.1,INSD:AV528681.1,INSD:AV441127.1,
INSD:EL137223.1,INSD:BE524409.1,INSD:AV543030.1,
INSD:BP783508.1,INSD:EL298184.1,INSD:EH891776.1,
INSD:EH841520.1,INSD:EL230551.1,INSD:EG476753.1,
INSD:EG476742.1,INSD:EL188052.1,INSD:EL338640.1,
INSD:AV546463.1,INSD:AV547844.1,INSD:EL168672.1,
INSD:ES078948.1,INSD:ES180480.1,INSD:ES216373.1,
INSD:BE527306.1"
/note="BAH domain; TFIIS helical bundle-like domain;
FUNCTIONS IN: transcription regulator activity, DNA
binding; INVOLVED IN: transcription; LOCATED IN: nucleus;
EXPRESSED IN: male gametophyte, cultured cell, pollen
tube; EXPRESSED DURING: L mature pollen stage, M
germinated pollen stage; CONTAINS InterPro DOMAIN/s:
Transcription factor IIS, N-terminal (InterPro:IPR017923),
Transcription elongation factor, TFIIS/CRSP70, N-terminal,
sub-type (InterPro:IPR003617), Bromo adjacent homology
(BAH) domain (InterPro:IPR001025), Transcription
elongation factor, TFIIS/elongin A/CRSP70, N-terminal
(InterPro:IPR010990); BEST Arabidopsis thaliana protein
match is: BAH domain; TFIIS helical bundle-like domain
(TAIR:AT3G48060.1); Has 30201 Blast hits to 17322 proteins
in 780 species: Archae - 12; Bacteria - 1396; Metazoa -
17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other
Eukaryotes - 2996 (source: NCBI BLink)."
/db_xref="TAIR:AT3G48050"
/db_xref="Araport:AT3G48050"
intron_pos 47:0 (1/2)
intron_pos 171:0 (2/2)
BEGIN
1 MHGRVCERRH KSRRRHMLIS SSRVIATVEG GGSSCLSLSS STSFSKDGRK ISVGDCALFK
61 PPQDCPPFIG IIRLIIAEEE DKLKLGVNWL YRPTELKLGK GILLEAEPNE LFYSFHEDNI
121 PAASLLHPCK VAFLPRGVEL PSGISSFVCR RVYDVTNERL WWLTDQDYID DRQLEVDKLL
181 CKTRSEMHTT LQQGGRSPKS MNSPTTSQPK DGIQNSNSFL SQGKGRKRER MDHGSESVKR
241 ERSSRVDDSG SGPLRTESGL KSEILKFTEK GGLVDSEGVE KLVQLMLPER NEKKIDLVGR
301 AILAGVVAAT DKFDCLSRFV QLRGLPVFDE WLQEVHKGKV GDGGSPKDSD RLVDDFLLVL
361 LRALDKLPVN LNALQTCNIG KSVNHLRSHK NSEIGKKARS LVDTWKKRVE AEMDAKSGSN
421 QGVSWPGRLS HGGRHSGGSA EANKTSSSHL HASKSVSVKQ QVENNLKCVA TSPGSTRSAP
481 SPGSGGNVSK DGQQRNAGAG GVSEVLAAVK DEKSSSSSQS HNNSQSCSSE HAKTGNLCGK
541 EDARSSTAGS TLKKCSGGSS RHRKSNNVFQ GSSSSASPRG AGLSRSFSSH RNVPSEKISQ
601 SSLTSEKTLE VPLTEGSGNK LIVKLPNRGR SPAQSVSGGS LEDPAPVNSR VSSPVHAVKQ
661 ELCDNNGREK NHSYRPNVSS VLNAESWQSN ELKDILTGSQ EAAGSPLVAG DERGGDLKDS
721 DKASGNVKGT SSLGNEFKSG ERHGGTLSSM NALIESCVRY SETNASLAGS DDVGMNLLAS
781 VAADEMSKSP VASPSVSQPP NSVMNENSTV GNNTKLMASD GLPHEQHQAV CTSVSTEQGE
841 QHVSSSGTQL ESEIKNESKT GDRDKSSNSD TEDLQRLVDQ CLESNDNSDG VVASPALPTK
901 AVKEKILNDS DSGELKDIKT DVKSEADCTS DSTKRVASSM LTECRDVSKK VDSVAVEQTP
961 LEGVDDDKKE EKPPTALSSE LVKKVEEDVP VSSGISRDMD AVSIGRPITE MVNNVAFNHM
1021 DQKDVKKIKQ DCDTSVGAIK DTSAGLDSSV TKGKVEPVEG NLENSEVKER YSGLRATPGL
1081 SPKEAEDLER PNGPKTSDAD GDEAGECTSA ARDASSVSAA ASAGSEMDAR VEFDLNEGFD
1141 GDDAKHGDSN NFSGSVFLTP TPLQPVKTLP FPVAPVSSGT RASITVAAAA KGPFVPPEDL
1201 LRNKGAVGWR GSAATSAFRP AEPRKPQDVL LSINNTSTSD ASTSAGKQTR TFLDFDLNVP
1261 DERVLEDLAS QRSGNPTNCT SDITNSFDQV RSGVMGSALD HSSGGLDLDL NKVDDSTDMI
1321 SYTMNSSHRL DSSFQQVKLP STGGRRDFDL NDGPVGDDAA VEPSMVLNQH SRSGLPSQPS
1381 LSGIRVNGEN MASFSTWFPA ANAYSAVSMP PIMPERGDQP FPMIATRGPQ RMLGPTTGVS
1441 SFTPEGYRGP VLSSSPAMPF QSTTFQYPVF PFGNSFPVTS ANFPGASTAH MDSSSSGRAC
1501 FPGVNSQILG PGVPVPSNYP RPYIVGLPNG GSNGGVLDNG AKWFRSGLDL NSGPGGHETE
1561 GRDESTLVAR QLSSSASLPL KEDQARMYQM SGGVLKRKEP EGGWDGYRQS SWQ
//