LOCUS       AEE78358.1               349 aa    PRT              PLN 23-MAR-2023
DEFINITION  Arabidopsis thaliana hypoxia-responsive family protein
            / zinc finger (C3HC4-type RING finger) family protein
            protein.
ACCESSION   CP002686-6576
PROTEIN_ID  AEE78358.1
SOURCE      Arabidopsis thaliana (thale cress)
  ORGANISM  Arabidopsis thaliana
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Brassicales; Brassicaceae;
            Camelineae; Arabidopsis.
REFERENCE   1  (bases 1 to 23459830)
  AUTHORS   Salanoubat,M., Lemcke,K., Rieger,M., Ansorge,W., Unseld,M.,
            Fartmann,B., Valle,G., Blocker,H., Perez-Alonso,M., Obermaier,B.,
            Delseny,M., Boutry,M., Grivell,L.A., Mache,R., Puigdomenech,P., De
            Simone,V., Choisne,N., Artiguenave,F., Robert,C., Brottier,P.,
            Wincker,P., Cattolico,L., Weissenbach,J., Saurin,W., Quetier,F.,
            Schafer,M., Muller-Auer,S., Gabel,C., Fuchs,M., Benes,V.,
            Wurmbach,E., Drzonek,H., Erfle,H., Jordan,N., Bangert,S.,
            Wiedelmann,R., Kranz,H., Voss,H., Holland,R., Brandt,P.,
            Nyakatura,G., Vezzi,A., D'Angelo,M., Pallavicini,A., Toppo,S.,
            Simionati,B., Conrad,A., Hornischer,K., Kauer,G., Lohnert,T.H.,
            Nordsiek,G., Reichelt,J., Scharfe,M., Schon,O., Bargues,M.,
            Terol,J., Climent,J., Navarro,P., Collado,C., Perez-Perez,A.,
            Ottenwalder,B., Duchemin,D., Cooke,R., Laudie,M., Berger-Llauro,C.,
            Purnelle,B., Masuy,D., de Haan,M., Maarse,A.C., Alcaraz,J.P.,
            Cottet,A., Casacuberta,E., Monfort,A., Argiriou,A., flores,M.,
            Liguori,R., Vitale,D., Mannhaupt,G., Haase,D., Schoof,H., Rudd,S.,
            Zaccaria,P., Mewes,H.W., Mayer,K.F., Kaul,S., Town,C.D., Koo,H.L.,
            Tallon,L.J., Jenkins,J., Rooney,T., Rizzo,M., Walts,A.,
            Utterback,T., Fujii,C.Y., Shea,T.P., Creasy,T.H., Haas,B.,
            Maiti,R., Wu,D., Peterson,J., Van Aken,S., Pai,G., Militscher,J.,
            Sellers,P., Gill,J.E., Feldblyum,T.V., Preuss,D., Lin,X.,
            Nierman,W.C., Salzberg,S.L., White,O., Venter,J.C., Fraser,C.M.,
            Kaneko,T., Nakamura,Y., Sato,S., Kato,T., Asamizu,E., Sasamoto,S.,
            Kimura,T., Idesawa,K., Kawashima,K., Kishida,Y., Kiyokawa,C.,
            Kohara,M., Matsumoto,M., Matsuno,A., Muraki,A., Nakayama,S.,
            Nakazaki,N., Shinpo,S., Takeuchi,C., Wada,T., Watanabe,A.,
            Yamada,M., Yasuda,M. and Tabata,S.
  CONSRTM   European Union Chromosome 3 Arabidopsis Sequencing Consortium;
            Institute for Genomic Research; Kazusa DNA Research Institute
  TITLE     Sequence and analysis of chromosome 3 of the plant Arabidopsis
            thaliana
  JOURNAL   Nature 408 (6814), 820-822 (2000)
   PUBMED   11130713
REFERENCE   2  (bases 1 to 23459830)
  AUTHORS   Swarbreck,D., Lamesch,P., Wilks,C. and Huala,E.
  CONSRTM   TAIR
  TITLE     Direct Submission
  JOURNAL   Submitted (18-FEB-2011) Department of Plant Biology, Carnegie
            Institution, 260 Panama Street, Stanford, CA, USA
REFERENCE   3  (bases 1 to 23459830)
  AUTHORS   Krishnakumar,V., Cheng,C.-Y., Chan,A.P., Schobel,S., Kim,M.,
            Ferlanti,E.S., Belyaeva,I., Rosen,B.D., Micklem,G., Miller,J.R.,
            Vaughn,M. and Town,C.D.
  TITLE     Direct Submission
  JOURNAL   Submitted (17-MAY-2016) Plant Genomics, J. Craig Venter Institute,
            9704 Medical Center Dr, Rockville, MD 20850, USA
  REMARK    Protein update by submitter
FEATURES             Qualifiers
     source          /organism="Arabidopsis thaliana"
                     /mol_type="genomic DNA"
                     /db_xref="taxon:3702"
                     /chromosome="3"
                     /ecotype="Columbia"
     protein         /locus_tag="AT3G48030"
                     /inference="Similar to RNA sequence,
                     EST:INSD:EL042901.1,INSD:ES114408.1,INSD:ES041771.1,
                     INSD:EL129603.1,INSD:EL315444.1,INSD:ES182568.1,
                     INSD:EL240966.1,INSD:ES127406.1,INSD:EL292257.1,
                     INSD:EL339103.1,INSD:EL186161.1,INSD:EL221308.1,
                     INSD:EH926094.1,INSD:EL223401.1,INSD:EL170385.1"
                     /inference="Similar to RNA sequence, mRNA:INSD:AB099346.1"
                     /note="hypoxia-responsive family protein / zinc finger
                     (C3HC4-type RING finger) family protein; FUNCTIONS IN:
                     zinc ion binding; INVOLVED IN: response to hypoxia;
                     EXPRESSED IN: hypocotyl, root; CONTAINS InterPro DOMAIN/s:
                     Zinc finger, RING-type (InterPro:IPR001841), Zinc finger,
                     C3HC4 RING-type (InterPro:IPR018957), Hypoxia induced
                     protein, conserved region (InterPro:IPR007667); BEST
                     Arabidopsis thaliana protein match is: RING/U-box
                     superfamily protein (TAIR:AT1G23980.1); Has 9958 Blast
                     hits to 9934 proteins in 295 species: Archae - 0; Bacteria
                     - 6; Metazoa - 2435; Fungi - 930; Plants - 5148; Viruses -
                     46; Other Eukaryotes - 1393 (source: NCBI BLink)."
                     /db_xref="TAIR:AT3G48030"
                     /db_xref="Araport:AT3G48030"
     intron_pos      26:1 (1/2)
     intron_pos      81:2 (2/2)
BEGIN
        1 MSSVEPDMED LFQEKKRVRN PLVPLGALMT AGVLTAGLIS FRRGNSQLGQ VLMRARVVVQ
       61 GATVALMVGT GYYYGDNPWK KLLLSEIHET EALSPKSSSA ATLTLMNQKD PSSSSIVSVL
      121 CLVISGLALI IVFLGVLYLI FKFLRKSSTL FPIPHFNYNP DLFSFSSPQL QHLFFLHDSG
      181 LDQTAIDALP VFLYGNVTIS LEQPFDCAVC LNEFSDTDKL RLLPVCSHAF HLHCIDTWLL
      241 SNSTCPLCRR SLSTSNVCYN HSETLVAPLS GHQQVDDGKA SLAKRVFSVR LGRFKSTNES
      301 QSQRHDVKDE IGVRMPRRCY SMGTQQYLVC DQDFVVALSS SPREGNIGR
//