LOCUS AEE78356.1 705 aa PRT PLN 23-MAR-2023
DEFINITION Arabidopsis thaliana cyclic nucleotide-gated channel 16 protein.
ACCESSION CP002686-6574
PROTEIN_ID AEE78356.1
SOURCE Arabidopsis thaliana (thale cress)
ORGANISM Arabidopsis thaliana
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
Pentapetalae; rosids; malvids; Brassicales; Brassicaceae;
Camelineae; Arabidopsis.
REFERENCE 1 (bases 1 to 23459830)
AUTHORS Salanoubat,M., Lemcke,K., Rieger,M., Ansorge,W., Unseld,M.,
Fartmann,B., Valle,G., Blocker,H., Perez-Alonso,M., Obermaier,B.,
Delseny,M., Boutry,M., Grivell,L.A., Mache,R., Puigdomenech,P., De
Simone,V., Choisne,N., Artiguenave,F., Robert,C., Brottier,P.,
Wincker,P., Cattolico,L., Weissenbach,J., Saurin,W., Quetier,F.,
Schafer,M., Muller-Auer,S., Gabel,C., Fuchs,M., Benes,V.,
Wurmbach,E., Drzonek,H., Erfle,H., Jordan,N., Bangert,S.,
Wiedelmann,R., Kranz,H., Voss,H., Holland,R., Brandt,P.,
Nyakatura,G., Vezzi,A., D'Angelo,M., Pallavicini,A., Toppo,S.,
Simionati,B., Conrad,A., Hornischer,K., Kauer,G., Lohnert,T.H.,
Nordsiek,G., Reichelt,J., Scharfe,M., Schon,O., Bargues,M.,
Terol,J., Climent,J., Navarro,P., Collado,C., Perez-Perez,A.,
Ottenwalder,B., Duchemin,D., Cooke,R., Laudie,M., Berger-Llauro,C.,
Purnelle,B., Masuy,D., de Haan,M., Maarse,A.C., Alcaraz,J.P.,
Cottet,A., Casacuberta,E., Monfort,A., Argiriou,A., flores,M.,
Liguori,R., Vitale,D., Mannhaupt,G., Haase,D., Schoof,H., Rudd,S.,
Zaccaria,P., Mewes,H.W., Mayer,K.F., Kaul,S., Town,C.D., Koo,H.L.,
Tallon,L.J., Jenkins,J., Rooney,T., Rizzo,M., Walts,A.,
Utterback,T., Fujii,C.Y., Shea,T.P., Creasy,T.H., Haas,B.,
Maiti,R., Wu,D., Peterson,J., Van Aken,S., Pai,G., Militscher,J.,
Sellers,P., Gill,J.E., Feldblyum,T.V., Preuss,D., Lin,X.,
Nierman,W.C., Salzberg,S.L., White,O., Venter,J.C., Fraser,C.M.,
Kaneko,T., Nakamura,Y., Sato,S., Kato,T., Asamizu,E., Sasamoto,S.,
Kimura,T., Idesawa,K., Kawashima,K., Kishida,Y., Kiyokawa,C.,
Kohara,M., Matsumoto,M., Matsuno,A., Muraki,A., Nakayama,S.,
Nakazaki,N., Shinpo,S., Takeuchi,C., Wada,T., Watanabe,A.,
Yamada,M., Yasuda,M. and Tabata,S.
CONSRTM European Union Chromosome 3 Arabidopsis Sequencing Consortium;
Institute for Genomic Research; Kazusa DNA Research Institute
TITLE Sequence and analysis of chromosome 3 of the plant Arabidopsis
thaliana
JOURNAL Nature 408 (6814), 820-822 (2000)
PUBMED 11130713
REFERENCE 2 (bases 1 to 23459830)
AUTHORS Swarbreck,D., Lamesch,P., Wilks,C. and Huala,E.
CONSRTM TAIR
TITLE Direct Submission
JOURNAL Submitted (18-FEB-2011) Department of Plant Biology, Carnegie
Institution, 260 Panama Street, Stanford, CA, USA
REFERENCE 3 (bases 1 to 23459830)
AUTHORS Krishnakumar,V., Cheng,C.-Y., Chan,A.P., Schobel,S., Kim,M.,
Ferlanti,E.S., Belyaeva,I., Rosen,B.D., Micklem,G., Miller,J.R.,
Vaughn,M. and Town,C.D.
TITLE Direct Submission
JOURNAL Submitted (17-MAY-2016) Plant Genomics, J. Craig Venter Institute,
9704 Medical Center Dr, Rockville, MD 20850, USA
REMARK Protein update by submitter
FEATURES Qualifiers
source /organism="Arabidopsis thaliana"
/mol_type="genomic DNA"
/db_xref="taxon:3702"
/chromosome="3"
/ecotype="Columbia"
protein /gene="CNGC16"
/locus_tag="AT3G48010"
/gene_synonym="ATCNGC16"
/gene_synonym="cyclic nucleotide-gated channel 16"
/gene_synonym="CYCLIC NUCLEOTIDE-GATED CHANNEL 16"
/inference="Similar to RNA sequence, mRNA:INSD:DQ446744.1"
/note="cyclic nucleotide-gated channel 16 (CNGC16);
FUNCTIONS IN: ion channel activity, cyclic nucleotide
binding, calmodulin binding; INVOLVED IN: ion transport,
transmembrane transport; LOCATED IN: membrane; EXPRESSED
IN: male gametophyte, flower, pollen tube; EXPRESSED
DURING: L mature pollen stage, M germinated pollen stage,
4 anthesis; CONTAINS InterPro DOMAIN/s: Cyclic
nucleotide-binding (InterPro:IPR000595), Ion transport
(InterPro:IPR005821), Cyclic nucleotide-binding-like
(InterPro:IPR018490), RmlC-like jelly roll fold
(InterPro:IPR014710); BEST Arabidopsis thaliana protein
match is: cyclic nucleotide-gated channel 18
(TAIR:AT5G14870.1); Has 3330 Blast hits to 3084 proteins
in 251 species: Archae - 0; Bacteria - 33; Metazoa - 1612;
Fungi - 37; Plants - 1021; Viruses - 0; Other Eukaryotes -
627 (source: NCBI BLink)."
/db_xref="TAIR:AT3G48010"
/db_xref="Araport:AT3G48010"
intron_pos 161:0 (1/6)
intron_pos 233:0 (2/6)
intron_pos 338:2 (3/6)
intron_pos 376:0 (4/6)
intron_pos 455:0 (5/6)
intron_pos 586:2 (6/6)
BEGIN
1 MSNLHLYTSA RFRNFPTTFS LRHHHNDPNN QRRRSIFSKL RDKTLDPGGD LITRWNHIFL
61 ITCLLALFLD PLYFYLPIVQ AGTACMSIDV RFGIFVTCFR NLADLSFLIH ILLKFKTAFV
121 SKSSRVFGRG ELVMDRREIA IRYLKSEFVI DLAATLPLPQ IMIWFVIPNA GEFRYAAHQN
181 HTLSLIVLIQ YVPRFLVMLP LNRRIIKATG VAAKTAWSGA AYNLILYLLV SHVLGSVWYV
241 LSIQRQHECW RRECIKEMNA THSPSCSLLF LDCGSLHDPG RQAWMRITRV LSNCDARNDD
301 DQHFQFGMFG DAFTNDVTSS PFFDKYFYCL WWGLRNLSSY GQSLAASTLS SETIFSCFIC
361 VAGLVFFSHL IGNVQNYLQS TTARLDEWRV RRRDTEEWMR HRQLPDELQE RVRRFVQYKW
421 LTTRGVDEEA ILRALPLDLR RQIQRHLCLA LVRRVPFFAQ MDDQLLDAIC ERLVPSLNTK
481 DTYVIREGDP VNEMLFIIRG QMESSTTDGG RSGFFNSITL RPGDFCGEEL LTWALVPNIN
541 HNLPLSTRTV RTLSEVEAFA LRAEDLKFVA NQFRRLHSKK LQHAFRYYSH QWRAWGTCFI
601 QAAWRRYMKR KLAMELARQE EEDDYFYDDD GDYQFEEDMP ESNNNNGDEN SSNNQNLSAT
661 ILASKFAANT KRGVLGNQRG STRIDPDHPT LKMPKMFKPE DPGFF
//