LOCUS AEE78353.1 252 aa PRT PLN 23-MAR-2023
DEFINITION Arabidopsis thaliana Integral membrane HPP family protein protein.
ACCESSION CP002686-6567
PROTEIN_ID AEE78353.1
SOURCE Arabidopsis thaliana (thale cress)
ORGANISM Arabidopsis thaliana
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
Pentapetalae; rosids; malvids; Brassicales; Brassicaceae;
Camelineae; Arabidopsis.
REFERENCE 1 (bases 1 to 23459830)
AUTHORS Salanoubat,M., Lemcke,K., Rieger,M., Ansorge,W., Unseld,M.,
Fartmann,B., Valle,G., Blocker,H., Perez-Alonso,M., Obermaier,B.,
Delseny,M., Boutry,M., Grivell,L.A., Mache,R., Puigdomenech,P., De
Simone,V., Choisne,N., Artiguenave,F., Robert,C., Brottier,P.,
Wincker,P., Cattolico,L., Weissenbach,J., Saurin,W., Quetier,F.,
Schafer,M., Muller-Auer,S., Gabel,C., Fuchs,M., Benes,V.,
Wurmbach,E., Drzonek,H., Erfle,H., Jordan,N., Bangert,S.,
Wiedelmann,R., Kranz,H., Voss,H., Holland,R., Brandt,P.,
Nyakatura,G., Vezzi,A., D'Angelo,M., Pallavicini,A., Toppo,S.,
Simionati,B., Conrad,A., Hornischer,K., Kauer,G., Lohnert,T.H.,
Nordsiek,G., Reichelt,J., Scharfe,M., Schon,O., Bargues,M.,
Terol,J., Climent,J., Navarro,P., Collado,C., Perez-Perez,A.,
Ottenwalder,B., Duchemin,D., Cooke,R., Laudie,M., Berger-Llauro,C.,
Purnelle,B., Masuy,D., de Haan,M., Maarse,A.C., Alcaraz,J.P.,
Cottet,A., Casacuberta,E., Monfort,A., Argiriou,A., flores,M.,
Liguori,R., Vitale,D., Mannhaupt,G., Haase,D., Schoof,H., Rudd,S.,
Zaccaria,P., Mewes,H.W., Mayer,K.F., Kaul,S., Town,C.D., Koo,H.L.,
Tallon,L.J., Jenkins,J., Rooney,T., Rizzo,M., Walts,A.,
Utterback,T., Fujii,C.Y., Shea,T.P., Creasy,T.H., Haas,B.,
Maiti,R., Wu,D., Peterson,J., Van Aken,S., Pai,G., Militscher,J.,
Sellers,P., Gill,J.E., Feldblyum,T.V., Preuss,D., Lin,X.,
Nierman,W.C., Salzberg,S.L., White,O., Venter,J.C., Fraser,C.M.,
Kaneko,T., Nakamura,Y., Sato,S., Kato,T., Asamizu,E., Sasamoto,S.,
Kimura,T., Idesawa,K., Kawashima,K., Kishida,Y., Kiyokawa,C.,
Kohara,M., Matsumoto,M., Matsuno,A., Muraki,A., Nakayama,S.,
Nakazaki,N., Shinpo,S., Takeuchi,C., Wada,T., Watanabe,A.,
Yamada,M., Yasuda,M. and Tabata,S.
CONSRTM European Union Chromosome 3 Arabidopsis Sequencing Consortium;
Institute for Genomic Research; Kazusa DNA Research Institute
TITLE Sequence and analysis of chromosome 3 of the plant Arabidopsis
thaliana
JOURNAL Nature 408 (6814), 820-822 (2000)
PUBMED 11130713
REFERENCE 2 (bases 1 to 23459830)
AUTHORS Swarbreck,D., Lamesch,P., Wilks,C. and Huala,E.
CONSRTM TAIR
TITLE Direct Submission
JOURNAL Submitted (18-FEB-2011) Department of Plant Biology, Carnegie
Institution, 260 Panama Street, Stanford, CA, USA
REFERENCE 3 (bases 1 to 23459830)
AUTHORS Krishnakumar,V., Cheng,C.-Y., Chan,A.P., Schobel,S., Kim,M.,
Ferlanti,E.S., Belyaeva,I., Rosen,B.D., Micklem,G., Miller,J.R.,
Vaughn,M. and Town,C.D.
TITLE Direct Submission
JOURNAL Submitted (17-MAY-2016) Plant Genomics, J. Craig Venter Institute,
9704 Medical Center Dr, Rockville, MD 20850, USA
REMARK Protein update by submitter
FEATURES Qualifiers
source /organism="Arabidopsis thaliana"
/mol_type="genomic DNA"
/db_xref="taxon:3702"
/chromosome="3"
/ecotype="Columbia"
protein /locus_tag="AT3G47980"
/inference="Similar to RNA sequence,
EST:INSD:BP582645.1,INSD:BP562629.2,INSD:BP663780.1,
INSD:BP565301.1,INSD:EH832167.1,INSD:BP800246.1,
INSD:CF653081.1,INSD:EL189793.1,INSD:BP582936.1,
INSD:AV818843.1"
/inference="Similar to RNA sequence,
mRNA:INSD:AK176249.1,INSD:AK227238.1,INSD:AK176602.1,
INSD:BT006407.1"
/note="Integral membrane HPP family protein; FUNCTIONS IN:
molecular_function unknown; INVOLVED IN:
biological_process unknown; LOCATED IN: integral to
membrane, chloroplast; EXPRESSED IN: root; CONTAINS
InterPro DOMAIN/s: HPP (InterPro:IPR007065); BEST
Arabidopsis thaliana protein match is: Integral membrane
HPP family protein (TAIR:AT5G62720.1); Has 1433 Blast hits
to 1433 proteins in 460 species: Archae - 0; Bacteria -
811; Metazoa - 0; Fungi - 64; Plants - 57; Viruses - 0;
Other Eukaryotes - 501 (source: NCBI BLink)."
/db_xref="TAIR:AT3G47980"
/db_xref="Araport:AT3G47980"
intron_pos 110:1 (1/4)
intron_pos 155:0 (2/4)
intron_pos 204:1 (3/4)
intron_pos 240:0 (4/4)
BEGIN
1 MASLPVKPLP SGHLQLHSRN LIIPPSMVTV GFKRHHFLGV SSYGLCIDES VRHMRSLRSS
61 SNRRRVSKSA GVSMPVASSD DFPAVSWESW KPEKTTVAPS LSDVIWPAAG AFAAMAIMGR
121 IDQMLNPKGI SMSVAPLGAV SAILFTTPSA PAARKYNMFT AQIGCAAIGV LAFSAFGPSW
181 LARSTALAAS IAFMVITRAN HPPAASLPLL FIDGAKLHKL NFWYALFPGA AACILLCFLQ
241 AIVGYLKENL KF
//