LOCUS AEE78339.1 706 aa PRT PLN 23-MAR-2023
DEFINITION Arabidopsis thaliana Tetratricopeptide repeat (TPR)-like
superfamily protein protein.
ACCESSION CP002686-6551
PROTEIN_ID AEE78339.1
SOURCE Arabidopsis thaliana (thale cress)
ORGANISM Arabidopsis thaliana
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
Pentapetalae; rosids; malvids; Brassicales; Brassicaceae;
Camelineae; Arabidopsis.
REFERENCE 1 (bases 1 to 23459830)
AUTHORS Salanoubat,M., Lemcke,K., Rieger,M., Ansorge,W., Unseld,M.,
Fartmann,B., Valle,G., Blocker,H., Perez-Alonso,M., Obermaier,B.,
Delseny,M., Boutry,M., Grivell,L.A., Mache,R., Puigdomenech,P., De
Simone,V., Choisne,N., Artiguenave,F., Robert,C., Brottier,P.,
Wincker,P., Cattolico,L., Weissenbach,J., Saurin,W., Quetier,F.,
Schafer,M., Muller-Auer,S., Gabel,C., Fuchs,M., Benes,V.,
Wurmbach,E., Drzonek,H., Erfle,H., Jordan,N., Bangert,S.,
Wiedelmann,R., Kranz,H., Voss,H., Holland,R., Brandt,P.,
Nyakatura,G., Vezzi,A., D'Angelo,M., Pallavicini,A., Toppo,S.,
Simionati,B., Conrad,A., Hornischer,K., Kauer,G., Lohnert,T.H.,
Nordsiek,G., Reichelt,J., Scharfe,M., Schon,O., Bargues,M.,
Terol,J., Climent,J., Navarro,P., Collado,C., Perez-Perez,A.,
Ottenwalder,B., Duchemin,D., Cooke,R., Laudie,M., Berger-Llauro,C.,
Purnelle,B., Masuy,D., de Haan,M., Maarse,A.C., Alcaraz,J.P.,
Cottet,A., Casacuberta,E., Monfort,A., Argiriou,A., flores,M.,
Liguori,R., Vitale,D., Mannhaupt,G., Haase,D., Schoof,H., Rudd,S.,
Zaccaria,P., Mewes,H.W., Mayer,K.F., Kaul,S., Town,C.D., Koo,H.L.,
Tallon,L.J., Jenkins,J., Rooney,T., Rizzo,M., Walts,A.,
Utterback,T., Fujii,C.Y., Shea,T.P., Creasy,T.H., Haas,B.,
Maiti,R., Wu,D., Peterson,J., Van Aken,S., Pai,G., Militscher,J.,
Sellers,P., Gill,J.E., Feldblyum,T.V., Preuss,D., Lin,X.,
Nierman,W.C., Salzberg,S.L., White,O., Venter,J.C., Fraser,C.M.,
Kaneko,T., Nakamura,Y., Sato,S., Kato,T., Asamizu,E., Sasamoto,S.,
Kimura,T., Idesawa,K., Kawashima,K., Kishida,Y., Kiyokawa,C.,
Kohara,M., Matsumoto,M., Matsuno,A., Muraki,A., Nakayama,S.,
Nakazaki,N., Shinpo,S., Takeuchi,C., Wada,T., Watanabe,A.,
Yamada,M., Yasuda,M. and Tabata,S.
CONSRTM European Union Chromosome 3 Arabidopsis Sequencing Consortium;
Institute for Genomic Research; Kazusa DNA Research Institute
TITLE Sequence and analysis of chromosome 3 of the plant Arabidopsis
thaliana
JOURNAL Nature 408 (6814), 820-822 (2000)
PUBMED 11130713
REFERENCE 2 (bases 1 to 23459830)
AUTHORS Swarbreck,D., Lamesch,P., Wilks,C. and Huala,E.
CONSRTM TAIR
TITLE Direct Submission
JOURNAL Submitted (18-FEB-2011) Department of Plant Biology, Carnegie
Institution, 260 Panama Street, Stanford, CA, USA
REFERENCE 3 (bases 1 to 23459830)
AUTHORS Krishnakumar,V., Cheng,C.-Y., Chan,A.P., Schobel,S., Kim,M.,
Ferlanti,E.S., Belyaeva,I., Rosen,B.D., Micklem,G., Miller,J.R.,
Vaughn,M. and Town,C.D.
TITLE Direct Submission
JOURNAL Submitted (17-MAY-2016) Plant Genomics, J. Craig Venter Institute,
9704 Medical Center Dr, Rockville, MD 20850, USA
REMARK Protein update by submitter
FEATURES Qualifiers
source /organism="Arabidopsis thaliana"
/mol_type="genomic DNA"
/db_xref="taxon:3702"
/chromosome="3"
/ecotype="Columbia"
protein /locus_tag="AT3G47840"
/note="Tetratricopeptide repeat (TPR)-like superfamily
protein; FUNCTIONS IN: binding; INVOLVED IN:
biological_process unknown; EXPRESSED IN: sperm cell;
CONTAINS InterPro DOMAIN/s: Pentatricopeptide repeat
(InterPro:IPR002885), Tetratricopeptide-like helical
(InterPro:IPR011990); BEST Arabidopsis thaliana protein
match is: Tetratricopeptide repeat (TPR)-like superfamily
protein (TAIR:AT3G53360.1); Has 44773 Blast hits to 13700
proteins in 237 species: Archae - 0; Bacteria - 16;
Metazoa - 99; Fungi - 72; Plants - 44090; Viruses - 0;
Other Eukaryotes - 496 (source: NCBI BLink)."
/db_xref="TAIR:AT3G47840"
/db_xref="Araport:AT3G47840"
BEGIN
1 MISSVRNCGT IQRFCTTSIS LLQKPVEENI VRISNQVMVK FDPNSHLRSL INAGNLRAAR
61 QVFDKMPHGD IVSWTSIIKR YVTANNSDEA LILFSAMRVV DHAVSPDTSV LSVVLKACGQ
121 SSNIAYGESL HAYAVKTSLL SSVYVGSSLL DMYKRVGKID KSCRVFSEMP FRNAVTWTAI
181 ITGLVHAGRY KEGLTYFSEM SRSEELSDTY TFAIALKACA GLRQVKYGKA IHTHVIVRGF
241 VTTLCVANSL ATMYTECGEM QDGLCLFENM SERDVVSWTS LIVAYKRIGQ EVKAVETFIK
301 MRNSQVPPNE QTFASMFSAC ASLSRLVWGE QLHCNVLSLG LNDSLSVSNS MMKMYSTCGN
361 LVSASVLFQG MRCRDIISWS TIIGGYCQAG FGEEGFKYFS WMRQSGTKPT DFALASLLSV
421 SGNMAVIEGG RQVHALALCF GLEQNSTVRS SLINMYSKCG SIKEASMIFG ETDRDDIVSL
481 TAMINGYAEH GKSKEAIDLF EKSLKVGFRP DSVTFISVLT ACTHSGQLDL GFHYFNMMQE
541 TYNMRPAKEH YGCMVDLLCR AGRLSDAEKM INEMSWKKDD VVWTTLLIAC KAKGDIERGR
601 RAAERILELD PTCATALVTL ANIYSSTGNL EEAANVRKNM KAKGVIKEPG WSSIKIKDCV
661 SAFVSGDRFH PQSEDIYNIL ELAVSGAEAH RFDCTLKRAF GVNLYS
//