LOCUS AEE78315.1 954 aa PRT PLN 23-MAR-2023
DEFINITION Arabidopsis thaliana Regulator of chromosome condensation
(RCC1) family protein protein.
ACCESSION CP002686-6516
PROTEIN_ID AEE78315.1
SOURCE Arabidopsis thaliana (thale cress)
ORGANISM Arabidopsis thaliana
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
Pentapetalae; rosids; malvids; Brassicales; Brassicaceae;
Camelineae; Arabidopsis.
REFERENCE 1 (bases 1 to 23459830)
AUTHORS Salanoubat,M., Lemcke,K., Rieger,M., Ansorge,W., Unseld,M.,
Fartmann,B., Valle,G., Blocker,H., Perez-Alonso,M., Obermaier,B.,
Delseny,M., Boutry,M., Grivell,L.A., Mache,R., Puigdomenech,P., De
Simone,V., Choisne,N., Artiguenave,F., Robert,C., Brottier,P.,
Wincker,P., Cattolico,L., Weissenbach,J., Saurin,W., Quetier,F.,
Schafer,M., Muller-Auer,S., Gabel,C., Fuchs,M., Benes,V.,
Wurmbach,E., Drzonek,H., Erfle,H., Jordan,N., Bangert,S.,
Wiedelmann,R., Kranz,H., Voss,H., Holland,R., Brandt,P.,
Nyakatura,G., Vezzi,A., D'Angelo,M., Pallavicini,A., Toppo,S.,
Simionati,B., Conrad,A., Hornischer,K., Kauer,G., Lohnert,T.H.,
Nordsiek,G., Reichelt,J., Scharfe,M., Schon,O., Bargues,M.,
Terol,J., Climent,J., Navarro,P., Collado,C., Perez-Perez,A.,
Ottenwalder,B., Duchemin,D., Cooke,R., Laudie,M., Berger-Llauro,C.,
Purnelle,B., Masuy,D., de Haan,M., Maarse,A.C., Alcaraz,J.P.,
Cottet,A., Casacuberta,E., Monfort,A., Argiriou,A., flores,M.,
Liguori,R., Vitale,D., Mannhaupt,G., Haase,D., Schoof,H., Rudd,S.,
Zaccaria,P., Mewes,H.W., Mayer,K.F., Kaul,S., Town,C.D., Koo,H.L.,
Tallon,L.J., Jenkins,J., Rooney,T., Rizzo,M., Walts,A.,
Utterback,T., Fujii,C.Y., Shea,T.P., Creasy,T.H., Haas,B.,
Maiti,R., Wu,D., Peterson,J., Van Aken,S., Pai,G., Militscher,J.,
Sellers,P., Gill,J.E., Feldblyum,T.V., Preuss,D., Lin,X.,
Nierman,W.C., Salzberg,S.L., White,O., Venter,J.C., Fraser,C.M.,
Kaneko,T., Nakamura,Y., Sato,S., Kato,T., Asamizu,E., Sasamoto,S.,
Kimura,T., Idesawa,K., Kawashima,K., Kishida,Y., Kiyokawa,C.,
Kohara,M., Matsumoto,M., Matsuno,A., Muraki,A., Nakayama,S.,
Nakazaki,N., Shinpo,S., Takeuchi,C., Wada,T., Watanabe,A.,
Yamada,M., Yasuda,M. and Tabata,S.
CONSRTM European Union Chromosome 3 Arabidopsis Sequencing Consortium;
Institute for Genomic Research; Kazusa DNA Research Institute
TITLE Sequence and analysis of chromosome 3 of the plant Arabidopsis
thaliana
JOURNAL Nature 408 (6814), 820-822 (2000)
PUBMED 11130713
REFERENCE 2 (bases 1 to 23459830)
AUTHORS Swarbreck,D., Lamesch,P., Wilks,C. and Huala,E.
CONSRTM TAIR
TITLE Direct Submission
JOURNAL Submitted (18-FEB-2011) Department of Plant Biology, Carnegie
Institution, 260 Panama Street, Stanford, CA, USA
REFERENCE 3 (bases 1 to 23459830)
AUTHORS Krishnakumar,V., Cheng,C.-Y., Chan,A.P., Schobel,S., Kim,M.,
Ferlanti,E.S., Belyaeva,I., Rosen,B.D., Micklem,G., Miller,J.R.,
Vaughn,M. and Town,C.D.
TITLE Direct Submission
JOURNAL Submitted (17-MAY-2016) Plant Genomics, J. Craig Venter Institute,
9704 Medical Center Dr, Rockville, MD 20850, USA
REMARK Protein update by submitter
FEATURES Qualifiers
source /organism="Arabidopsis thaliana"
/mol_type="genomic DNA"
/db_xref="taxon:3702"
/chromosome="3"
/ecotype="Columbia"
protein /locus_tag="AT3G47660"
/inference="Similar to RNA sequence,
EST:INSD:AV783033.1,INSD:EG526425.1,INSD:EG526426.1,
INSD:BP602061.1,INSD:AV543248.1"
/note="Regulator of chromosome condensation (RCC1) family
protein; FUNCTIONS IN: chromatin binding, zinc ion
binding, Ran GTPase binding; EXPRESSED IN: leaf whorl,
male gametophyte, flower, pollen tube; EXPRESSED DURING: L
mature pollen stage, M germinated pollen stage, 4
anthesis; CONTAINS InterPro DOMAIN/s: Zinc finger,
FYVE-type (InterPro:IPR000306), Regulator of chromosome
condensation/beta-lactamase-inhibitor protein II
(InterPro:IPR009091), Zinc finger, FYVE-related
(InterPro:IPR017455), Regulator of chromosome
condensation, RCC1 (InterPro:IPR000408), Pleckstrin
homology-type (InterPro:IPR011993), Zinc finger,
FYVE/PHD-type (InterPro:IPR011011); BEST Arabidopsis
thaliana protein match is: Regulator of chromosome
condensation (RCC1) family with FYVE zinc finger domain
(TAIR:AT5G19420.1); Has 18978 Blast hits to 7605 proteins
in 414 species: Archae - 65; Bacteria - 1839; Metazoa -
7882; Fungi - 907; Plants - 2582; Viruses - 3; Other
Eukaryotes - 5700 (source: NCBI BLink)."
/db_xref="TAIR:AT3G47660"
/db_xref="Araport:AT3G47660"
intron_pos 9:2 (1/8)
intron_pos 20:0 (2/8)
intron_pos 49:0 (3/8)
intron_pos 79:0 (4/8)
intron_pos 106:0 (5/8)
intron_pos 167:0 (6/8)
intron_pos 887:0 (7/8)
intron_pos 936:0 (8/8)
BEGIN
1 MRFSIRKLRS VPTDRENEQA IAILKKGAYL LKYGRRGKPK FYPFRLSSDE IYLLWYCGKK
61 EKRLKLSSVT RIIPGQRTAV FRRYPQPTKE YQSFSLIYGE RSLDLDKDEA EFWLTTLRAL
121 LSRNNSSALV LHSRSRSLAP ENGEQSSSSQ NSKSNIRSVS SDTSYEEHAK KASGSHCNTP
181 QRLGKVFSEV LSQTAVLKAL SLDELVHKPH TSPPETIENR PTNHSSPGVD TSKYSISSAV
241 SSSSQGSTFE DLKSLCDVFV WGESIGDGLL GGGMHKSGSS SSLMTDSFLP KVLKSHVALD
301 AQSISCGTNY AVLVTKQGQM YSWGEESGGR LGHGVCSYVP HPKLIDEFNG STVELADCGE
361 FHTCAVTASG DLYAWGDGDH NAGLLGLGSG ASHWKPVRIL GQMEGIYVKA ISCGPWHTAF
421 VTSEGKLFTF GDGTFGALGH GDRISTNIPR EVEALNGCRT IKAACGVWHS AAVVSVFGEA
481 TSSGKLFTWG DGDDGRLGHG DIECRLIPSC VTELDTTSFQ QVACGQSITV ALSMSGQVYA
541 MGTADPSHDI VRAPSCIEGG LGKSFVQEVA CGFHHIAVLN SKAEVYTWGK GSNGQLGHGD
601 TEYRCMPTLV KALKGKQVRK VVCGSNYTAT ICLHKPITGT DSTKCSGCRH PFNYMRKLHN
661 CYNCGSVFCN SCTSKKSLAA AMAPKTNRPY RVCDDCYIKL EGIRESLATP ANSARFSNAS
721 LPSSYEMDEI GITPQRQLLR VDSFDFFRQT KHADLKTIGE TSGGSCTSSI HSNMDIKGSF
781 NLKGIRRLSR LTSFDSVQEE GKQRTKHCAS KSDTSSLIRH SVTCGLPFSR RGSVELFPLS
841 IKSSPVESVA TTSDFTTDIT DHELLQEVPK KSNQCLSHEI SVLKAQVEEL TLKSKKLETE
901 LGKTSKKLEV AVLMARDDAE KIKSSEEIVR SLTLQLMNTT KKEVDKTRRH RNSF
//