LOCUS AEE78292.1 403 aa PRT PLN 23-MAR-2023
DEFINITION Arabidopsis thaliana malate dehydrogenase protein.
ACCESSION CP002686-6484
PROTEIN_ID AEE78292.1
SOURCE Arabidopsis thaliana (thale cress)
ORGANISM Arabidopsis thaliana
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
Pentapetalae; rosids; malvids; Brassicales; Brassicaceae;
Camelineae; Arabidopsis.
REFERENCE 1 (bases 1 to 23459830)
AUTHORS Salanoubat,M., Lemcke,K., Rieger,M., Ansorge,W., Unseld,M.,
Fartmann,B., Valle,G., Blocker,H., Perez-Alonso,M., Obermaier,B.,
Delseny,M., Boutry,M., Grivell,L.A., Mache,R., Puigdomenech,P., De
Simone,V., Choisne,N., Artiguenave,F., Robert,C., Brottier,P.,
Wincker,P., Cattolico,L., Weissenbach,J., Saurin,W., Quetier,F.,
Schafer,M., Muller-Auer,S., Gabel,C., Fuchs,M., Benes,V.,
Wurmbach,E., Drzonek,H., Erfle,H., Jordan,N., Bangert,S.,
Wiedelmann,R., Kranz,H., Voss,H., Holland,R., Brandt,P.,
Nyakatura,G., Vezzi,A., D'Angelo,M., Pallavicini,A., Toppo,S.,
Simionati,B., Conrad,A., Hornischer,K., Kauer,G., Lohnert,T.H.,
Nordsiek,G., Reichelt,J., Scharfe,M., Schon,O., Bargues,M.,
Terol,J., Climent,J., Navarro,P., Collado,C., Perez-Perez,A.,
Ottenwalder,B., Duchemin,D., Cooke,R., Laudie,M., Berger-Llauro,C.,
Purnelle,B., Masuy,D., de Haan,M., Maarse,A.C., Alcaraz,J.P.,
Cottet,A., Casacuberta,E., Monfort,A., Argiriou,A., flores,M.,
Liguori,R., Vitale,D., Mannhaupt,G., Haase,D., Schoof,H., Rudd,S.,
Zaccaria,P., Mewes,H.W., Mayer,K.F., Kaul,S., Town,C.D., Koo,H.L.,
Tallon,L.J., Jenkins,J., Rooney,T., Rizzo,M., Walts,A.,
Utterback,T., Fujii,C.Y., Shea,T.P., Creasy,T.H., Haas,B.,
Maiti,R., Wu,D., Peterson,J., Van Aken,S., Pai,G., Militscher,J.,
Sellers,P., Gill,J.E., Feldblyum,T.V., Preuss,D., Lin,X.,
Nierman,W.C., Salzberg,S.L., White,O., Venter,J.C., Fraser,C.M.,
Kaneko,T., Nakamura,Y., Sato,S., Kato,T., Asamizu,E., Sasamoto,S.,
Kimura,T., Idesawa,K., Kawashima,K., Kishida,Y., Kiyokawa,C.,
Kohara,M., Matsumoto,M., Matsuno,A., Muraki,A., Nakayama,S.,
Nakazaki,N., Shinpo,S., Takeuchi,C., Wada,T., Watanabe,A.,
Yamada,M., Yasuda,M. and Tabata,S.
CONSRTM European Union Chromosome 3 Arabidopsis Sequencing Consortium;
Institute for Genomic Research; Kazusa DNA Research Institute
TITLE Sequence and analysis of chromosome 3 of the plant Arabidopsis
thaliana
JOURNAL Nature 408 (6814), 820-822 (2000)
PUBMED 11130713
REFERENCE 2 (bases 1 to 23459830)
AUTHORS Swarbreck,D., Lamesch,P., Wilks,C. and Huala,E.
CONSRTM TAIR
TITLE Direct Submission
JOURNAL Submitted (18-FEB-2011) Department of Plant Biology, Carnegie
Institution, 260 Panama Street, Stanford, CA, USA
REFERENCE 3 (bases 1 to 23459830)
AUTHORS Krishnakumar,V., Cheng,C.-Y., Chan,A.P., Schobel,S., Kim,M.,
Ferlanti,E.S., Belyaeva,I., Rosen,B.D., Micklem,G., Miller,J.R.,
Vaughn,M. and Town,C.D.
TITLE Direct Submission
JOURNAL Submitted (17-MAY-2016) Plant Genomics, J. Craig Venter Institute,
9704 Medical Center Dr, Rockville, MD 20850, USA
REMARK Protein update by submitter
FEATURES Qualifiers
source /organism="Arabidopsis thaliana"
/mol_type="genomic DNA"
/db_xref="taxon:3702"
/chromosome="3"
/ecotype="Columbia"
protein /gene="MDH"
/locus_tag="AT3G47520"
/gene_synonym="malate dehydrogenase"
/gene_synonym="MALATE DEHYDROGENASE"
/gene_synonym="plastidic NAD-dependent malate
dehydrogenase"
/gene_synonym="pNAD-MDH"
/inference="Similar to RNA sequence,
EST:INSD:EH874841.1,INSD:EG519101.1,INSD:DR268254.1,
INSD:EG525005.1,INSD:ES122443.1,INSD:EL185728.1,
INSD:EG508366.1,INSD:EH987161.1,INSD:EL321266.1,
INSD:AV796833.1,INSD:EG488939.1,INSD:EH842180.1,
INSD:ES092519.1,INSD:DR268244.1,INSD:EH986473.1,
INSD:EG519102.1,INSD:EH797994.1,INSD:EH824054.1,
INSD:EH822337.1,INSD:ES161360.1,INSD:EL162371.1,
INSD:EL260258.1,INSD:AV552260.1,INSD:EL156867.1,
INSD:EL165760.1,INSD:AV806829.1,INSD:DR268246.1,
INSD:EH883635.1,INSD:ES005009.1,INSD:DR268245.1,
INSD:BP795114.1,INSD:DR268255.1,INSD:DR268242.1,
INSD:BP583323.1,INSD:EH803827.1,INSD:EG472158.1,
INSD:EL188360.1,INSD:BP643194.1,INSD:DR268251.1,
INSD:ES188977.1,INSD:R30432.1,INSD:EG457289.1,
INSD:DR300993.1,INSD:DR268261.1,INSD:BP779708.1,
INSD:EG508312.1,INSD:EH961733.1,INSD:EG508441.1,
INSD:ES072301.1,INSD:EG508347.1,INSD:EH870166.1,
INSD:EL324912.1,INSD:EL132786.1,INSD:EL214117.1,
INSD:EL213416.1,INSD:EH876930.1,INSD:EL159683.1,
INSD:EL012743.1,INSD:T76293.1,INSD:EH866026.1,
INSD:BP823885.1,INSD:AV441976.1,INSD:EH927651.1,
INSD:BP670511.1,INSD:EH902678.1,INSD:EL183435.1,
INSD:EL107374.1,INSD:BP603433.1,INSD:AV558504.1,
INSD:EG525006.1,INSD:EH934756.1,INSD:AV540695.1,
INSD:EL228945.1,INSD:EL098589.1,INSD:BP827132.1,
INSD:BP795004.1,INSD:EL337841.1,INSD:BP819503.1,
INSD:EH890831.1,INSD:AV530893.1,INSD:EL216480.1,
INSD:EL036375.1,INSD:EL207003.1,INSD:EH905489.1,
INSD:ES199670.1,INSD:DR268256.1,INSD:DR370685.1,
INSD:EL138515.1,INSD:DR268258.1,INSD:DR268250.1,
INSD:EG491336.1,INSD:EG508348.1,INSD:AV526571.1,
INSD:DR268247.1,INSD:DR268259.1,INSD:DR268243.1,
INSD:DR268248.1,INSD:DR268241.1,INSD:DR268252.1,
INSD:EH949421.1,INSD:T41845.1,INSD:EL123709.1,
INSD:BE525083.1,INSD:DR374943.1,INSD:EL129131.1,
INSD:AV826939.1,INSD:BP830034.1,INSD:EG508440.1,
INSD:EG472159.1,INSD:EH818339.1,INSD:AW004089.1,
INSD:EH936300.1,INSD:AV820585.1,INSD:DR268249.1,
INSD:BP796362.1,INSD:DR268253.1,INSD:EL104471.1,
INSD:DR268260.1,INSD:EL210908.1,INSD:EH831475.1,
INSD:EG508367.1,INSD:EH865469.1,INSD:EL235434.1,
INSD:ES175958.1,INSD:AV533131.1,INSD:EL988234.1,
INSD:EH890393.1,INSD:EG508311.1,INSD:DR268257.1,
INSD:EL176622.1,INSD:EL973150.1,INSD:EL972358.1,
INSD:EL967810.1,INSD:EG491335.1,INSD:EL316817.1,
INSD:ES160597.1,INSD:T22499.1,INSD:AI100206.1,
INSD:ES185373.1,INSD:BP823666.1"
/inference="Similar to RNA sequence,
mRNA:INSD:BT000621.1,INSD:Y13987.1,INSD:BX823503.1,
INSD:BX823784.1,INSD:BX823403.1,INSD:AY128281.1"
/note="malate dehydrogenase (MDH); FUNCTIONS IN: in 6
functions; INVOLVED IN: response to cold; LOCATED IN: in 8
components; EXPRESSED IN: 25 plant structures; EXPRESSED
DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s:
Lactate/malate dehydrogenase, C-terminal
(InterPro:IPR022383), Malate dehydrogenase, NAD-dependent,
eukaryote/gamma proteobacteria (InterPro:IPR010097),
NAD(P)-binding domain (InterPro:IPR016040),
L-lactate/malate dehydrogenase (InterPro:IPR001557),
Lactate/malate dehydrogenase, N-terminal
(InterPro:IPR001236), Malate dehydrogenase, active site
(InterPro:IPR001252), Lactate dehydrogenase/glycoside
hydrolase, family 4, C-terminal (InterPro:IPR015955); BEST
Arabidopsis thaliana protein match is: peroxisomal
NAD-malate dehydrogenase 1 (TAIR:AT2G22780.1); Has 17295
Blast hits to 17293 proteins in 5537 species: Archae -
237; Bacteria - 12026; Metazoa - 1437; Fungi - 394; Plants
- 805; Viruses - 0; Other Eukaryotes - 2396 (source: NCBI
BLink)."
/db_xref="TAIR:AT3G47520"
/db_xref="Araport:AT3G47520"
BEGIN
1 MATATSASLF STVSSSYSKA SSIPHSRLQS VKFNSVPSFT GLKSTSLISG SDSSSLAKTL
61 RGSVTKAQTS DKKPYGFKIN ASYKVAVLGA AGGIGQPLSL LIKMSPLVST LHLYDIANVK
121 GVAADLSHCN TPSQVRDFTG PSELADCLKD VNVVVIPAGV PRKPGMTRDD LFNINANIVK
181 TLVEAVAENC PNAFIHIISN PVNSTVPIAA EVLKKKGVYD PKKLFGVTTL DVVRANTFVS
241 QKKNLKLIDV DVPVIGGHAG ITILPLLSKT KPSVNFTDEE IQELTVRIQN AGTEVVDAKA
301 GAGSATLSMA YAAARFVESS LRALDGDGDV YECSFVESTL TDLPFFASRV KIGKNGLEAV
361 IESDLQGLTE YEQKALEALK VELKASIDKG VAFANKPAAA AAN
//