LOCUS AEE78290.1 448 aa PRT PLN 23-MAR-2023
DEFINITION Arabidopsis thaliana cycling DOF factor 3 protein.
ACCESSION CP002686-6482
PROTEIN_ID AEE78290.1
SOURCE Arabidopsis thaliana (thale cress)
ORGANISM Arabidopsis thaliana
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
Pentapetalae; rosids; malvids; Brassicales; Brassicaceae;
Camelineae; Arabidopsis.
REFERENCE 1 (bases 1 to 23459830)
AUTHORS Salanoubat,M., Lemcke,K., Rieger,M., Ansorge,W., Unseld,M.,
Fartmann,B., Valle,G., Blocker,H., Perez-Alonso,M., Obermaier,B.,
Delseny,M., Boutry,M., Grivell,L.A., Mache,R., Puigdomenech,P., De
Simone,V., Choisne,N., Artiguenave,F., Robert,C., Brottier,P.,
Wincker,P., Cattolico,L., Weissenbach,J., Saurin,W., Quetier,F.,
Schafer,M., Muller-Auer,S., Gabel,C., Fuchs,M., Benes,V.,
Wurmbach,E., Drzonek,H., Erfle,H., Jordan,N., Bangert,S.,
Wiedelmann,R., Kranz,H., Voss,H., Holland,R., Brandt,P.,
Nyakatura,G., Vezzi,A., D'Angelo,M., Pallavicini,A., Toppo,S.,
Simionati,B., Conrad,A., Hornischer,K., Kauer,G., Lohnert,T.H.,
Nordsiek,G., Reichelt,J., Scharfe,M., Schon,O., Bargues,M.,
Terol,J., Climent,J., Navarro,P., Collado,C., Perez-Perez,A.,
Ottenwalder,B., Duchemin,D., Cooke,R., Laudie,M., Berger-Llauro,C.,
Purnelle,B., Masuy,D., de Haan,M., Maarse,A.C., Alcaraz,J.P.,
Cottet,A., Casacuberta,E., Monfort,A., Argiriou,A., flores,M.,
Liguori,R., Vitale,D., Mannhaupt,G., Haase,D., Schoof,H., Rudd,S.,
Zaccaria,P., Mewes,H.W., Mayer,K.F., Kaul,S., Town,C.D., Koo,H.L.,
Tallon,L.J., Jenkins,J., Rooney,T., Rizzo,M., Walts,A.,
Utterback,T., Fujii,C.Y., Shea,T.P., Creasy,T.H., Haas,B.,
Maiti,R., Wu,D., Peterson,J., Van Aken,S., Pai,G., Militscher,J.,
Sellers,P., Gill,J.E., Feldblyum,T.V., Preuss,D., Lin,X.,
Nierman,W.C., Salzberg,S.L., White,O., Venter,J.C., Fraser,C.M.,
Kaneko,T., Nakamura,Y., Sato,S., Kato,T., Asamizu,E., Sasamoto,S.,
Kimura,T., Idesawa,K., Kawashima,K., Kishida,Y., Kiyokawa,C.,
Kohara,M., Matsumoto,M., Matsuno,A., Muraki,A., Nakayama,S.,
Nakazaki,N., Shinpo,S., Takeuchi,C., Wada,T., Watanabe,A.,
Yamada,M., Yasuda,M. and Tabata,S.
CONSRTM European Union Chromosome 3 Arabidopsis Sequencing Consortium;
Institute for Genomic Research; Kazusa DNA Research Institute
TITLE Sequence and analysis of chromosome 3 of the plant Arabidopsis
thaliana
JOURNAL Nature 408 (6814), 820-822 (2000)
PUBMED 11130713
REFERENCE 2 (bases 1 to 23459830)
AUTHORS Swarbreck,D., Lamesch,P., Wilks,C. and Huala,E.
CONSRTM TAIR
TITLE Direct Submission
JOURNAL Submitted (18-FEB-2011) Department of Plant Biology, Carnegie
Institution, 260 Panama Street, Stanford, CA, USA
REFERENCE 3 (bases 1 to 23459830)
AUTHORS Krishnakumar,V., Cheng,C.-Y., Chan,A.P., Schobel,S., Kim,M.,
Ferlanti,E.S., Belyaeva,I., Rosen,B.D., Micklem,G., Miller,J.R.,
Vaughn,M. and Town,C.D.
TITLE Direct Submission
JOURNAL Submitted (17-MAY-2016) Plant Genomics, J. Craig Venter Institute,
9704 Medical Center Dr, Rockville, MD 20850, USA
REMARK Protein update by submitter
FEATURES Qualifiers
source /organism="Arabidopsis thaliana"
/mol_type="genomic DNA"
/db_xref="taxon:3702"
/chromosome="3"
/ecotype="Columbia"
protein /gene="CDF3"
/locus_tag="AT3G47500"
/gene_synonym="cycling DOF factor 3"
/inference="Similar to RNA sequence,
EST:INSD:DR750295.1,INSD:EG446251.1,INSD:AV810875.1,
INSD:EH805565.1,INSD:AV441499.1,INSD:AV559509.1,
INSD:DR297144.1,INSD:EG446262.1,INSD:AV792383.1,
INSD:DR297142.1,INSD:DR379682.1,INSD:DR750274.1,
INSD:BP622606.1,INSD:EL286320.1,INSD:BP788282.1,
INSD:F14111.1,INSD:EL055704.1,INSD:DR297141.1,
INSD:DR297143.1,INSD:BP588550.1,INSD:AV823989.1,
INSD:BP784984.1,INSD:AV785093.1,INSD:BP782238.1,
INSD:EL317432.1,INSD:BP588917.1,INSD:BP810382.1,
INSD:EH877897.1,INSD:EL192582.1,INSD:F14082.1,
INSD:EH801182.1,INSD:EG446269.1,INSD:BP781412.1,
INSD:AV806778.1,INSD:DR297140.1,INSD:DR750296.1,
INSD:EH964361.1,INSD:DR297139.1,INSD:EG446261.1,
INSD:AV800166.1,INSD:EH979123.1,INSD:EH973094.1,
INSD:BP788426.1"
/inference="Similar to RNA sequence,
mRNA:INSD:AY084628.1,INSD:AY065152.1,INSD:AF079503.1,
INSD:AY128757.1,INSD:BX823391.1,INSD:BX825633.1"
/note="cycling DOF factor 3 (CDF3); CONTAINS InterPro
DOMAIN/s: Zinc finger, Dof-type (InterPro:IPR003851); BEST
Arabidopsis thaliana protein match is: cycling DOF factor
1 (TAIR:AT5G62430.1); Has 1160 Blast hits to 1145 proteins
in 79 species: Archae - 0; Bacteria - 0; Metazoa - 13;
Fungi - 10; Plants - 1084; Viruses - 0; Other Eukaryotes -
53 (source: NCBI BLink)."
/db_xref="TAIR:AT3G47500"
/db_xref="Araport:AT3G47500"
intron_pos 48:0 (1/1)
BEGIN
1 MMMETRDPAI KLFGMKIPFP SVFESAVTVE DDEEDDWSGG DDKSPEKVTP ELSDKNNNNC
61 NDNSFNNSKP ETLDKEEATS TDQIESSDTP EDNQQTTPDG KTLKKPTKIL PCPRCKSMET
121 KFCYYNNYNI NQPRHFCKAC QRYWTAGGTM RNVPVGAGRR KNKSSSSHYR HITISEALEA
181 ARLDPGLQAN TRVLSFGLEA QQQHVAAPMT PVMKLQEDQK VSNGARNRFH GLADQRLVAR
241 VENGDDCSSG SSVTTSNNHS VDESRAQSGS VVEAQMNNNN NNNMNGYACI PGVPWPYTWN
301 PAMPPPGFYP PPGYPMPFYP YWTIPMLPPH QSSSPISQKC SNTNSPTLGK HPRDEGSSKK
361 DNETERKQKA GCVLVPKTLR IDDPNEAAKS SIWTTLGIKN EAMCKAGGMF KGFDHKTKMY
421 NNDKAENSPV LSANPAALSR SHNFHEQI
//