LOCUS AEE78271.1 122 aa PRT PLN 23-MAR-2023
DEFINITION Arabidopsis thaliana Ribosomal protein S10p/S20e family
protein protein.
ACCESSION CP002686-6456
PROTEIN_ID AEE78271.1
SOURCE Arabidopsis thaliana (thale cress)
ORGANISM Arabidopsis thaliana
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
Pentapetalae; rosids; malvids; Brassicales; Brassicaceae;
Camelineae; Arabidopsis.
REFERENCE 1 (bases 1 to 23459830)
AUTHORS Salanoubat,M., Lemcke,K., Rieger,M., Ansorge,W., Unseld,M.,
Fartmann,B., Valle,G., Blocker,H., Perez-Alonso,M., Obermaier,B.,
Delseny,M., Boutry,M., Grivell,L.A., Mache,R., Puigdomenech,P., De
Simone,V., Choisne,N., Artiguenave,F., Robert,C., Brottier,P.,
Wincker,P., Cattolico,L., Weissenbach,J., Saurin,W., Quetier,F.,
Schafer,M., Muller-Auer,S., Gabel,C., Fuchs,M., Benes,V.,
Wurmbach,E., Drzonek,H., Erfle,H., Jordan,N., Bangert,S.,
Wiedelmann,R., Kranz,H., Voss,H., Holland,R., Brandt,P.,
Nyakatura,G., Vezzi,A., D'Angelo,M., Pallavicini,A., Toppo,S.,
Simionati,B., Conrad,A., Hornischer,K., Kauer,G., Lohnert,T.H.,
Nordsiek,G., Reichelt,J., Scharfe,M., Schon,O., Bargues,M.,
Terol,J., Climent,J., Navarro,P., Collado,C., Perez-Perez,A.,
Ottenwalder,B., Duchemin,D., Cooke,R., Laudie,M., Berger-Llauro,C.,
Purnelle,B., Masuy,D., de Haan,M., Maarse,A.C., Alcaraz,J.P.,
Cottet,A., Casacuberta,E., Monfort,A., Argiriou,A., flores,M.,
Liguori,R., Vitale,D., Mannhaupt,G., Haase,D., Schoof,H., Rudd,S.,
Zaccaria,P., Mewes,H.W., Mayer,K.F., Kaul,S., Town,C.D., Koo,H.L.,
Tallon,L.J., Jenkins,J., Rooney,T., Rizzo,M., Walts,A.,
Utterback,T., Fujii,C.Y., Shea,T.P., Creasy,T.H., Haas,B.,
Maiti,R., Wu,D., Peterson,J., Van Aken,S., Pai,G., Militscher,J.,
Sellers,P., Gill,J.E., Feldblyum,T.V., Preuss,D., Lin,X.,
Nierman,W.C., Salzberg,S.L., White,O., Venter,J.C., Fraser,C.M.,
Kaneko,T., Nakamura,Y., Sato,S., Kato,T., Asamizu,E., Sasamoto,S.,
Kimura,T., Idesawa,K., Kawashima,K., Kishida,Y., Kiyokawa,C.,
Kohara,M., Matsumoto,M., Matsuno,A., Muraki,A., Nakayama,S.,
Nakazaki,N., Shinpo,S., Takeuchi,C., Wada,T., Watanabe,A.,
Yamada,M., Yasuda,M. and Tabata,S.
CONSRTM European Union Chromosome 3 Arabidopsis Sequencing Consortium;
Institute for Genomic Research; Kazusa DNA Research Institute
TITLE Sequence and analysis of chromosome 3 of the plant Arabidopsis
thaliana
JOURNAL Nature 408 (6814), 820-822 (2000)
PUBMED 11130713
REFERENCE 2 (bases 1 to 23459830)
AUTHORS Swarbreck,D., Lamesch,P., Wilks,C. and Huala,E.
CONSRTM TAIR
TITLE Direct Submission
JOURNAL Submitted (18-FEB-2011) Department of Plant Biology, Carnegie
Institution, 260 Panama Street, Stanford, CA, USA
REFERENCE 3 (bases 1 to 23459830)
AUTHORS Krishnakumar,V., Cheng,C.-Y., Chan,A.P., Schobel,S., Kim,M.,
Ferlanti,E.S., Belyaeva,I., Rosen,B.D., Micklem,G., Miller,J.R.,
Vaughn,M. and Town,C.D.
TITLE Direct Submission
JOURNAL Submitted (17-MAY-2016) Plant Genomics, J. Craig Venter Institute,
9704 Medical Center Dr, Rockville, MD 20850, USA
REMARK Protein update by submitter
FEATURES Qualifiers
source /organism="Arabidopsis thaliana"
/mol_type="genomic DNA"
/db_xref="taxon:3702"
/chromosome="3"
/ecotype="Columbia"
protein /locus_tag="AT3G47370"
/inference="Similar to RNA sequence,
EST:INSD:EL036197.1,INSD:ES018284.1,INSD:ES155134.1,
INSD:EH878033.1,INSD:BP573651.1,INSD:BP633523.1,
INSD:ES177023.1,INSD:ES177427.1,INSD:BP670044.1,
INSD:ES085752.1,INSD:BP575274.1,INSD:ES016300.1,
INSD:ES041879.1,INSD:EL194314.1,INSD:ES198621.1,
INSD:ES187257.1,INSD:EL313533.1,INSD:CK716368.1,
INSD:EL219945.1,INSD:BP655319.1,INSD:EL974699.1,
INSD:AU226096.1,INSD:ES019180.1,INSD:ES100426.1,
INSD:BP574161.1,INSD:EL099176.1,INSD:ES018221.1,
INSD:ES191216.1,INSD:AV532791.1,INSD:EH899736.1,
INSD:BP650346.1,INSD:ES055487.1,INSD:EH939503.1,
INSD:EL163603.1,INSD:ES056290.1,INSD:EL986832.1,
INSD:EL089724.1,INSD:EH888669.1,INSD:ES052380.1,
INSD:ES013091.1,INSD:BP630272.1,INSD:BP572453.1,
INSD:BP652260.1,INSD:ES094188.1,INSD:ES026048.1,
INSD:EL201335.1,INSD:EL968948.1,INSD:ES176409.1,
INSD:BP671484.1,INSD:EH991646.1,INSD:BP649347.1,
INSD:ES116799.1,INSD:ES161909.1,INSD:BP569048.1"
/inference="Similar to RNA sequence, mRNA:INSD:BT003067.1"
/note="Ribosomal protein S10p/S20e family protein;
FUNCTIONS IN: structural constituent of ribosome, RNA
binding; INVOLVED IN: translation; LOCATED IN: in 6
components; EXPRESSED IN: 23 plant structures; EXPRESSED
DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s:
Ribosomal protein S10, conserved site
(InterPro:IPR018268), Ribosomal protein S10,
eukaryotic/archaeal (InterPro:IPR005729), Ribosomal
protein S10 (InterPro:IPR001848); BEST Arabidopsis
thaliana protein match is: Ribosomal protein S10p/S20e
family protein (TAIR:AT5G62300.2); Has 7480 Blast hits to
7480 proteins in 2601 species: Archae - 270; Bacteria -
4741; Metazoa - 380; Fungi - 140; Plants - 182; Viruses -
0; Other Eukaryotes - 1767 (source: NCBI BLink)."
/db_xref="TAIR:AT3G47370"
/db_xref="Araport:AT3G47370"
intron_pos 38:1 (1/2)
intron_pos 76:1 (2/2)
BEGIN
1 MAYEPMKPTK AGLEAPLEQI HKIRITLSSK NVKNLEKVCT DLVRGAKDKR LRVKGPVRMP
61 TKVLKITTRK APCGEGTNTW DRFELRVHKR VIDLFSSPDV VKQITSITIE PGVEVEVTIA
121 DS
//