LOCUS AEE78184.1 395 aa PRT PLN 23-MAR-2023
DEFINITION Arabidopsis thaliana zinc finger (C3HC4-type RING finger)
family protein protein.
ACCESSION CP002686-6340
PROTEIN_ID AEE78184.1
SOURCE Arabidopsis thaliana (thale cress)
ORGANISM Arabidopsis thaliana
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
Pentapetalae; rosids; malvids; Brassicales; Brassicaceae;
Camelineae; Arabidopsis.
REFERENCE 1 (bases 1 to 23459830)
AUTHORS Salanoubat,M., Lemcke,K., Rieger,M., Ansorge,W., Unseld,M.,
Fartmann,B., Valle,G., Blocker,H., Perez-Alonso,M., Obermaier,B.,
Delseny,M., Boutry,M., Grivell,L.A., Mache,R., Puigdomenech,P., De
Simone,V., Choisne,N., Artiguenave,F., Robert,C., Brottier,P.,
Wincker,P., Cattolico,L., Weissenbach,J., Saurin,W., Quetier,F.,
Schafer,M., Muller-Auer,S., Gabel,C., Fuchs,M., Benes,V.,
Wurmbach,E., Drzonek,H., Erfle,H., Jordan,N., Bangert,S.,
Wiedelmann,R., Kranz,H., Voss,H., Holland,R., Brandt,P.,
Nyakatura,G., Vezzi,A., D'Angelo,M., Pallavicini,A., Toppo,S.,
Simionati,B., Conrad,A., Hornischer,K., Kauer,G., Lohnert,T.H.,
Nordsiek,G., Reichelt,J., Scharfe,M., Schon,O., Bargues,M.,
Terol,J., Climent,J., Navarro,P., Collado,C., Perez-Perez,A.,
Ottenwalder,B., Duchemin,D., Cooke,R., Laudie,M., Berger-Llauro,C.,
Purnelle,B., Masuy,D., de Haan,M., Maarse,A.C., Alcaraz,J.P.,
Cottet,A., Casacuberta,E., Monfort,A., Argiriou,A., flores,M.,
Liguori,R., Vitale,D., Mannhaupt,G., Haase,D., Schoof,H., Rudd,S.,
Zaccaria,P., Mewes,H.W., Mayer,K.F., Kaul,S., Town,C.D., Koo,H.L.,
Tallon,L.J., Jenkins,J., Rooney,T., Rizzo,M., Walts,A.,
Utterback,T., Fujii,C.Y., Shea,T.P., Creasy,T.H., Haas,B.,
Maiti,R., Wu,D., Peterson,J., Van Aken,S., Pai,G., Militscher,J.,
Sellers,P., Gill,J.E., Feldblyum,T.V., Preuss,D., Lin,X.,
Nierman,W.C., Salzberg,S.L., White,O., Venter,J.C., Fraser,C.M.,
Kaneko,T., Nakamura,Y., Sato,S., Kato,T., Asamizu,E., Sasamoto,S.,
Kimura,T., Idesawa,K., Kawashima,K., Kishida,Y., Kiyokawa,C.,
Kohara,M., Matsumoto,M., Matsuno,A., Muraki,A., Nakayama,S.,
Nakazaki,N., Shinpo,S., Takeuchi,C., Wada,T., Watanabe,A.,
Yamada,M., Yasuda,M. and Tabata,S.
CONSRTM European Union Chromosome 3 Arabidopsis Sequencing Consortium;
Institute for Genomic Research; Kazusa DNA Research Institute
TITLE Sequence and analysis of chromosome 3 of the plant Arabidopsis
thaliana
JOURNAL Nature 408 (6814), 820-822 (2000)
PUBMED 11130713
REFERENCE 2 (bases 1 to 23459830)
AUTHORS Swarbreck,D., Lamesch,P., Wilks,C. and Huala,E.
CONSRTM TAIR
TITLE Direct Submission
JOURNAL Submitted (18-FEB-2011) Department of Plant Biology, Carnegie
Institution, 260 Panama Street, Stanford, CA, USA
REFERENCE 3 (bases 1 to 23459830)
AUTHORS Krishnakumar,V., Cheng,C.-Y., Chan,A.P., Schobel,S., Kim,M.,
Ferlanti,E.S., Belyaeva,I., Rosen,B.D., Micklem,G., Miller,J.R.,
Vaughn,M. and Town,C.D.
TITLE Direct Submission
JOURNAL Submitted (17-MAY-2016) Plant Genomics, J. Craig Venter Institute,
9704 Medical Center Dr, Rockville, MD 20850, USA
REMARK Protein update by submitter
FEATURES Qualifiers
source /organism="Arabidopsis thaliana"
/mol_type="genomic DNA"
/db_xref="taxon:3702"
/chromosome="3"
/ecotype="Columbia"
protein /gene="RDUF1"
/locus_tag="AT3G46620"
/gene_synonym="Arabidopsis thaliana RING and Domain of
Unknown Function 1117 1"
/gene_synonym="AtRDUF1"
/gene_synonym="RING and Domain of Unknown Function 1117 1"
/inference="Similar to RNA sequence,
EST:INSD:DR252253.1,INSD:DR252250.1,INSD:AV802080.1,
INSD:BP829896.1,INSD:BU635180.1,INSD:EL278028.1,
INSD:BP605318.1,INSD:EL139470.1,INSD:H36704.1,
INSD:AV828607.1,INSD:DR252251.1,INSD:BP573552.1,
INSD:BP819935.1,INSD:BP653826.1,INSD:BP589631.1,
INSD:BE662904.1,INSD:CD529615.1,INSD:BP569141.1,
INSD:CK120434.1,INSD:BP582937.1,INSD:EG492603.1,
INSD:EG480072.1,INSD:DR252254.1,INSD:BP597034.1,
INSD:BP648560.1,INSD:BX836673.1,INSD:BP617266.1,
INSD:BP812973.1,INSD:AV536444.1,INSD:DR252249.1,
INSD:CB253536.1,INSD:DR252252.1,INSD:BP843234.1,
INSD:BP665750.1,INSD:EL179757.1,INSD:EG492602.1,
INSD:ES087639.1,INSD:CB252918.1,INSD:CD533821.1,
INSD:EL290733.1,INSD:BP808814.1,INSD:CD532846.1,
INSD:CD534129.1,INSD:BP638653.1,INSD:BP599217.1,
INSD:BP617338.1,INSD:BP642230.1,INSD:DR252255.1,
INSD:AI998890.1"
/inference="Similar to RNA sequence,
mRNA:INSD:BT008859.1,INSD:BX822481.1,INSD:BX822628.1,
INSD:BX824036.1,INSD:BX823436.1,INSD:BX825003.1,
INSD:AY093203.1"
/note="zinc finger (C3HC4-type RING finger) family
protein; FUNCTIONS IN: zinc ion binding; INVOLVED IN:
response to chitin; EXPRESSED IN: 24 plant structures;
EXPRESSED DURING: 15 growth stages; CONTAINS InterPro
DOMAIN/s: Zinc finger, RING-type (InterPro:IPR001841),
Zinc finger, C3HC4 RING-type (InterPro:IPR018957), Protein
of unknown function DUF1117 (InterPro:IPR010543); BEST
Arabidopsis thaliana protein match is: zinc finger
(C3HC4-type RING finger) family protein
(TAIR:AT5G59550.1); Has 8876 Blast hits to 8844 proteins
in 271 species: Archae - 0; Bacteria - 6; Metazoa - 2388;
Fungi - 760; Plants - 4652; Viruses - 43; Other Eukaryotes
- 1027 (source: NCBI BLink)."
/db_xref="TAIR:AT3G46620"
/db_xref="Araport:AT3G46620"
BEGIN
1 MMPNSRSATI TPTTESTTTT TTTTTTLTTS YWCYSCTRFI SVWEDQDANA GVLCPYCNGG
61 FIEEIEDSSN STVAAIPAST PEVRSVEETH RSIIRRRRSN RRTSFNPVIV LHGGGGGGAG
121 ERVENEEGDG ATRERRAYEF YYDDGSGSGL RPLPDSVSEI LMGSGFERLL EQLSQIEASG
181 NGIGRSGNPP ASKSAIESLP RVEISDCHTK AEANCAVCTE VFEAGIEGRE MPCKHIFHGD
241 CIVPWLSIRN SCPVCRFELP SDPIQRSNEE EHAVGMTIWR LPGGGFAVGR FNAGVREGER
301 ILPVVLTEMD GGGLGSNEGP RRISWVRAHE TPEMSRNGGR SGNGGRLRRA VRGMVSFMRR
361 VRPSRGSSNS NVIDLDSDGE TRVMNRSTSL IRRFF
//