LOCUS AEE78113.1 486 aa PRT PLN 23-MAR-2023
DEFINITION Arabidopsis thaliana Histidyl-tRNA synthetase 1 protein.
ACCESSION CP002686-6233
PROTEIN_ID AEE78113.1
SOURCE Arabidopsis thaliana (thale cress)
ORGANISM Arabidopsis thaliana
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
Pentapetalae; rosids; malvids; Brassicales; Brassicaceae;
Camelineae; Arabidopsis.
REFERENCE 1 (bases 1 to 23459830)
AUTHORS Salanoubat,M., Lemcke,K., Rieger,M., Ansorge,W., Unseld,M.,
Fartmann,B., Valle,G., Blocker,H., Perez-Alonso,M., Obermaier,B.,
Delseny,M., Boutry,M., Grivell,L.A., Mache,R., Puigdomenech,P., De
Simone,V., Choisne,N., Artiguenave,F., Robert,C., Brottier,P.,
Wincker,P., Cattolico,L., Weissenbach,J., Saurin,W., Quetier,F.,
Schafer,M., Muller-Auer,S., Gabel,C., Fuchs,M., Benes,V.,
Wurmbach,E., Drzonek,H., Erfle,H., Jordan,N., Bangert,S.,
Wiedelmann,R., Kranz,H., Voss,H., Holland,R., Brandt,P.,
Nyakatura,G., Vezzi,A., D'Angelo,M., Pallavicini,A., Toppo,S.,
Simionati,B., Conrad,A., Hornischer,K., Kauer,G., Lohnert,T.H.,
Nordsiek,G., Reichelt,J., Scharfe,M., Schon,O., Bargues,M.,
Terol,J., Climent,J., Navarro,P., Collado,C., Perez-Perez,A.,
Ottenwalder,B., Duchemin,D., Cooke,R., Laudie,M., Berger-Llauro,C.,
Purnelle,B., Masuy,D., de Haan,M., Maarse,A.C., Alcaraz,J.P.,
Cottet,A., Casacuberta,E., Monfort,A., Argiriou,A., flores,M.,
Liguori,R., Vitale,D., Mannhaupt,G., Haase,D., Schoof,H., Rudd,S.,
Zaccaria,P., Mewes,H.W., Mayer,K.F., Kaul,S., Town,C.D., Koo,H.L.,
Tallon,L.J., Jenkins,J., Rooney,T., Rizzo,M., Walts,A.,
Utterback,T., Fujii,C.Y., Shea,T.P., Creasy,T.H., Haas,B.,
Maiti,R., Wu,D., Peterson,J., Van Aken,S., Pai,G., Militscher,J.,
Sellers,P., Gill,J.E., Feldblyum,T.V., Preuss,D., Lin,X.,
Nierman,W.C., Salzberg,S.L., White,O., Venter,J.C., Fraser,C.M.,
Kaneko,T., Nakamura,Y., Sato,S., Kato,T., Asamizu,E., Sasamoto,S.,
Kimura,T., Idesawa,K., Kawashima,K., Kishida,Y., Kiyokawa,C.,
Kohara,M., Matsumoto,M., Matsuno,A., Muraki,A., Nakayama,S.,
Nakazaki,N., Shinpo,S., Takeuchi,C., Wada,T., Watanabe,A.,
Yamada,M., Yasuda,M. and Tabata,S.
CONSRTM European Union Chromosome 3 Arabidopsis Sequencing Consortium;
Institute for Genomic Research; Kazusa DNA Research Institute
TITLE Sequence and analysis of chromosome 3 of the plant Arabidopsis
thaliana
JOURNAL Nature 408 (6814), 820-822 (2000)
PUBMED 11130713
REFERENCE 2 (bases 1 to 23459830)
AUTHORS Swarbreck,D., Lamesch,P., Wilks,C. and Huala,E.
CONSRTM TAIR
TITLE Direct Submission
JOURNAL Submitted (18-FEB-2011) Department of Plant Biology, Carnegie
Institution, 260 Panama Street, Stanford, CA, USA
REFERENCE 3 (bases 1 to 23459830)
AUTHORS Krishnakumar,V., Cheng,C.-Y., Chan,A.P., Schobel,S., Kim,M.,
Ferlanti,E.S., Belyaeva,I., Rosen,B.D., Micklem,G., Miller,J.R.,
Vaughn,M. and Town,C.D.
TITLE Direct Submission
JOURNAL Submitted (17-MAY-2016) Plant Genomics, J. Craig Venter Institute,
9704 Medical Center Dr, Rockville, MD 20850, USA
REMARK Protein update by submitter
FEATURES Qualifiers
source /organism="Arabidopsis thaliana"
/mol_type="genomic DNA"
/db_xref="taxon:3702"
/chromosome="3"
/ecotype="Columbia"
protein /gene="HRS1"
/locus_tag="AT3G46100"
/gene_synonym="ATHRS1"
/gene_synonym="HISTIDYL-TRNA SYNTHETASE"
/gene_synonym="Histidyl-tRNA synthetase 1"
/inference="Similar to RNA sequence,
EST:INSD:BP632043.1,INSD:EH913073.1,INSD:BP648144.1,
INSD:AV816473.1,INSD:BP832202.1,INSD:EL204112.1,
INSD:BP813253.1,INSD:EH873390.1,INSD:EH982258.1,
INSD:EG521596.1,INSD:EL267671.1,INSD:BP819297.1,
INSD:BP651708.1,INSD:EH933950.1,INSD:BP779344.1,
INSD:AA651196.1,INSD:EL086392.1,INSD:ES162571.1,
INSD:BP561569.1,INSD:EH837920.1,INSD:EG521595.1,
INSD:DR380668.1,INSD:EL297213.1,INSD:BP844776.1,
INSD:BP819552.1,INSD:ES214362.1,INSD:BP589142.1,
INSD:DR367983.1,INSD:BE844715.1,INSD:BP627668.1,
INSD:EH974379.1,INSD:AV794354.1,INSD:BP782804.1"
/inference="Similar to RNA sequence,
mRNA:INSD:AY056233.1,INSD:BX823290.1,INSD:BX822586.1,
INSD:AY117252.1,INSD:BX824502.1,INSD:AF020715.1,
INSD:AK221125.1"
/note="Histidyl-tRNA synthetase 1 (HRS1); FUNCTIONS IN:
histidine-tRNA ligase activity; INVOLVED IN: histidyl-tRNA
aminoacylation; LOCATED IN: mitochondrion, chloroplast;
EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13
growth stages; CONTAINS InterPro DOMAIN/s: Histidyl-tRNA
synthetase, class IIa, subgroup (InterPro:IPR015807),
Aminoacyl-tRNA synthetase, class II (G/ H/ P/ S),
conserved domain (InterPro:IPR002314), Anticodon-binding
(InterPro:IPR004154), Aminoacyl-tRNA synthetase, class II,
conserved domain (InterPro:IPR006195), Histidyl-tRNA
synthetase, class IIa (InterPro:IPR004516); BEST
Arabidopsis thaliana protein match is: Class II aaRS and
biotin synthetases superfamily protein (TAIR:AT5G03406.1);
Has 12183 Blast hits to 12140 proteins in 2982 species:
Archae - 258; Bacteria - 7725; Metazoa - 293; Fungi - 147;
Plants - 90; Viruses - 0; Other Eukaryotes - 3670 (source:
NCBI BLink)."
/db_xref="TAIR:AT3G46100"
/db_xref="Araport:AT3G46100"
intron_pos 96:0 (1/9)
intron_pos 128:0 (2/9)
intron_pos 157:2 (3/9)
intron_pos 201:0 (4/9)
intron_pos 232:0 (5/9)
intron_pos 257:0 (6/9)
intron_pos 296:1 (7/9)
intron_pos 344:0 (8/9)
intron_pos 387:0 (9/9)
BEGIN
1 MRAIHIVTTR LSSSFRPILL LDLVSSCSPP RQFSIPRRLI CAAANGGGRS GSIVAPLVTE
61 EDFHKKIDVN PPKGTRDFPP EDMRLRNWLF NHFKEVSRLY GYEEVDYPVL ETEALFIRKA
121 GEEIRDQLYC FEDRGNRRVA LRPELTPSLA RLVIQKGKSV SLPLKWFAIG QCWRYERMTR
181 GRRREHYQWN MDIIGVPQVT AEAELISSIV TFFKRIGITA SDVGFKVSSR KVLQELLKKY
241 GVPEDLFGRV CIIIDKIEKI PIDEIKKELG FTGISEDAIE QLLQVLSVKS LDDLEDIIGG
301 AGEAIADLKQ LFSLAEKFGY SEWIQFDASV VRGLAYYTGI VFEGFDRKGK LRAICGGGRY
361 DRLLSTYGGD DFPACGFGFG DAVIVELLKE KDLLPELGQE VENIVCALDK DLQGAAATVA
421 TALRDKGQTV DLVLESKPLK WVFKRAARVN ARRLVLVGKT EWEDGSVSVK VLSSGEQFQV
481 KLSDLE
//