LOCUS AEE78106.1 216 aa PRT PLN 23-MAR-2023
DEFINITION Arabidopsis thaliana RAB GTPase homolog 8A protein.
ACCESSION CP002686-6226
PROTEIN_ID AEE78106.1
SOURCE Arabidopsis thaliana (thale cress)
ORGANISM Arabidopsis thaliana
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
Pentapetalae; rosids; malvids; Brassicales; Brassicaceae;
Camelineae; Arabidopsis.
REFERENCE 1 (bases 1 to 23459830)
AUTHORS Salanoubat,M., Lemcke,K., Rieger,M., Ansorge,W., Unseld,M.,
Fartmann,B., Valle,G., Blocker,H., Perez-Alonso,M., Obermaier,B.,
Delseny,M., Boutry,M., Grivell,L.A., Mache,R., Puigdomenech,P., De
Simone,V., Choisne,N., Artiguenave,F., Robert,C., Brottier,P.,
Wincker,P., Cattolico,L., Weissenbach,J., Saurin,W., Quetier,F.,
Schafer,M., Muller-Auer,S., Gabel,C., Fuchs,M., Benes,V.,
Wurmbach,E., Drzonek,H., Erfle,H., Jordan,N., Bangert,S.,
Wiedelmann,R., Kranz,H., Voss,H., Holland,R., Brandt,P.,
Nyakatura,G., Vezzi,A., D'Angelo,M., Pallavicini,A., Toppo,S.,
Simionati,B., Conrad,A., Hornischer,K., Kauer,G., Lohnert,T.H.,
Nordsiek,G., Reichelt,J., Scharfe,M., Schon,O., Bargues,M.,
Terol,J., Climent,J., Navarro,P., Collado,C., Perez-Perez,A.,
Ottenwalder,B., Duchemin,D., Cooke,R., Laudie,M., Berger-Llauro,C.,
Purnelle,B., Masuy,D., de Haan,M., Maarse,A.C., Alcaraz,J.P.,
Cottet,A., Casacuberta,E., Monfort,A., Argiriou,A., flores,M.,
Liguori,R., Vitale,D., Mannhaupt,G., Haase,D., Schoof,H., Rudd,S.,
Zaccaria,P., Mewes,H.W., Mayer,K.F., Kaul,S., Town,C.D., Koo,H.L.,
Tallon,L.J., Jenkins,J., Rooney,T., Rizzo,M., Walts,A.,
Utterback,T., Fujii,C.Y., Shea,T.P., Creasy,T.H., Haas,B.,
Maiti,R., Wu,D., Peterson,J., Van Aken,S., Pai,G., Militscher,J.,
Sellers,P., Gill,J.E., Feldblyum,T.V., Preuss,D., Lin,X.,
Nierman,W.C., Salzberg,S.L., White,O., Venter,J.C., Fraser,C.M.,
Kaneko,T., Nakamura,Y., Sato,S., Kato,T., Asamizu,E., Sasamoto,S.,
Kimura,T., Idesawa,K., Kawashima,K., Kishida,Y., Kiyokawa,C.,
Kohara,M., Matsumoto,M., Matsuno,A., Muraki,A., Nakayama,S.,
Nakazaki,N., Shinpo,S., Takeuchi,C., Wada,T., Watanabe,A.,
Yamada,M., Yasuda,M. and Tabata,S.
CONSRTM European Union Chromosome 3 Arabidopsis Sequencing Consortium;
Institute for Genomic Research; Kazusa DNA Research Institute
TITLE Sequence and analysis of chromosome 3 of the plant Arabidopsis
thaliana
JOURNAL Nature 408 (6814), 820-822 (2000)
PUBMED 11130713
REFERENCE 2 (bases 1 to 23459830)
AUTHORS Swarbreck,D., Lamesch,P., Wilks,C. and Huala,E.
CONSRTM TAIR
TITLE Direct Submission
JOURNAL Submitted (18-FEB-2011) Department of Plant Biology, Carnegie
Institution, 260 Panama Street, Stanford, CA, USA
REFERENCE 3 (bases 1 to 23459830)
AUTHORS Krishnakumar,V., Cheng,C.-Y., Chan,A.P., Schobel,S., Kim,M.,
Ferlanti,E.S., Belyaeva,I., Rosen,B.D., Micklem,G., Miller,J.R.,
Vaughn,M. and Town,C.D.
TITLE Direct Submission
JOURNAL Submitted (17-MAY-2016) Plant Genomics, J. Craig Venter Institute,
9704 Medical Center Dr, Rockville, MD 20850, USA
REMARK Protein update by submitter
FEATURES Qualifiers
source /organism="Arabidopsis thaliana"
/mol_type="genomic DNA"
/db_xref="taxon:3702"
/chromosome="3"
/ecotype="Columbia"
protein /gene="RABE1c"
/locus_tag="AT3G46060"
/gene_synonym="ARA-3"
/gene_synonym="ARA3"
/gene_synonym="ATRAB8A"
/gene_synonym="ATRABE1C"
/gene_synonym="RAB GTPase homolog 8A"
/gene_synonym="RAB8A"
/gene_synonym="SMALL GTP-BINDING PROTEIN"
/inference="Similar to RNA sequence,
EST:INSD:BP568290.1,INSD:BP861445.1,INSD:BP844054.1,
INSD:BP609284.1,INSD:ES074951.1,INSD:BP641138.1,
INSD:EG473777.1,INSD:DR240754.1,INSD:BP862799.1,
INSD:ES127368.1,INSD:BP805770.1,INSD:BP855207.1,
INSD:EL048695.1,INSD:EH836352.1,INSD:EG506923.1,
INSD:ES051396.1,INSD:EG473378.1,INSD:DR240747.1,
INSD:EG521706.1,INSD:BP656504.1,INSD:BP562646.2,
INSD:BP567857.1,INSD:ES081337.1,INSD:AV789190.1,
INSD:EG473372.1,INSD:EG473775.1,INSD:EL094651.1,
INSD:EL278627.1,INSD:DR240748.1,INSD:DR371336.1,
INSD:BP660262.1,INSD:EL131910.1,INSD:EG473371.1,
INSD:EL236060.1,INSD:AA651591.1,INSD:BP823190.1,
INSD:EG521707.1,INSD:EG486293.1,INSD:ES167196.1,
INSD:BP660135.1,INSD:EL150190.1,INSD:BP822597.1,
INSD:EH911430.1,INSD:EG473766.1,INSD:EL293746.1,
INSD:EG473768.1,INSD:ES075620.1,INSD:EG473769.1,
INSD:AV799590.1,INSD:BP615778.1,INSD:BP780282.1,
INSD:BP821054.1,INSD:BP864735.1,INSD:BP659792.1,
INSD:DR334026.1,INSD:EL299824.1,INSD:ES154707.1,
INSD:DR240743.1,INSD:ES061672.1,INSD:ES052135.1,
INSD:EH803423.1,INSD:DR240746.1,INSD:EH925216.1,
INSD:DR240753.1,INSD:EG473369.1,INSD:BP619238.1,
INSD:BP645485.1,INSD:EG506922.1,INSD:BP582384.1,
INSD:AV527662.1,INSD:AA597826.1,INSD:EH994856.1,
INSD:EL311158.1,INSD:ES080537.1,INSD:EH837435.1,
INSD:BE530872.1,INSD:EG486294.1,INSD:EL166749.1,
INSD:ES137793.1,INSD:AV538509.1,INSD:DR240751.1,
INSD:BP616132.1,INSD:EG473772.1,INSD:BP860357.1,
INSD:EG473359.1,INSD:CK118985.1,INSD:BP810198.1,
INSD:CK117535.1,INSD:ES040727.1,INSD:ES046423.1,
INSD:EH865067.1,INSD:ES183693.1,INSD:BP795380.1,
INSD:BP823143.1,INSD:BP821116.1,INSD:EH991856.1,
INSD:BE523540.1,INSD:AV549472.1,INSD:AA067446.1,
INSD:AV537534.1,INSD:EL050066.1,INSD:EG473377.1,
INSD:BP834537.1,INSD:EG473767.1,INSD:EG473761.1,
INSD:DR240752.1,INSD:EG473393.1,INSD:BP838220.1,
INSD:BP841793.1,INSD:BP649403.1,INSD:DR381856.1,
INSD:AV553718.1,INSD:EL201779.1,INSD:BP645303.1,
INSD:EG473388.1,INSD:BP796861.1,INSD:EH823189.1,
INSD:AV822613.1,INSD:DR240744.1,INSD:ES124287.1,
INSD:EL144844.1,INSD:AV820267.1,INSD:BP838473.2,
INSD:AV807821.1,INSD:EH877764.1,INSD:T75793.1,
INSD:DR240745.1,INSD:EG473360.1,INSD:BP646923.1,
INSD:DR240750.1,INSD:BP657743.1,INSD:DR240749.1,
INSD:BP662678.1,INSD:EG473361.1,INSD:AV531959.1,
INSD:ES136458.1,INSD:EL066296.1,INSD:EG473762.1,
INSD:ES018933.1,INSD:ES060101.1,INSD:EL338830.1,
INSD:EL222784.1,INSD:BP637644.1"
/inference="Similar to RNA sequence,
mRNA:INSD:D01025.1,INSD:BX823100.1,INSD:BX823852.1,
INSD:BT001952.1,INSD:BT002186.1,INSD:AY035132.1,
INSD:AY042795.1,INSD:BX824081.1,INSD:BX824783.1"
/note="RAB GTPase homolog 8A (RAB8A); FUNCTIONS IN: GTP
binding; INVOLVED IN: ethylene mediated signaling pathway;
LOCATED IN: plasma membrane, vacuole; EXPRESSED IN: 26
plant structures; EXPRESSED DURING: 15 growth stages;
CONTAINS InterPro DOMAIN/s: Ras GTPase
(InterPro:IPR001806), Small GTP-binding protein
(InterPro:IPR005225), Small GTPase (InterPro:IPR020851),
Ras (InterPro:IPR013753), Ras small GTPase, Rab type
(InterPro:IPR003579); BEST Arabidopsis thaliana protein
match is: Ras-related small GTP-binding family protein
(TAIR:AT5G59840.1); Has 29695 Blast hits to 29627 proteins
in 805 species: Archae - 22; Bacteria - 171; Metazoa -
15449; Fungi - 4249; Plants - 3560; Viruses - 20; Other
Eukaryotes - 6224 (source: NCBI BLink)."
/db_xref="TAIR:AT3G46060"
/db_xref="Araport:AT3G46060"
intron_pos 25:1 (1/7)
intron_pos 49:2 (2/7)
intron_pos 83:1 (3/7)
intron_pos 105:1 (4/7)
intron_pos 138:0 (5/7)
intron_pos 159:0 (6/7)
intron_pos 190:0 (7/7)
BEGIN
1 MAAPPARARA DYDYLIKLLL IGDSGVGKSC LLLRFSDGSF TTSFITTIGI DFKIRTIELD
61 GKRIKLQIWD TAGQERFRTI TTAYYRGAMG ILLVYDVTDE SSFNNIRNWI RNIEQHASDN
121 VNKILVGNKA DMDESKRAVP TAKGQALADE YGIKFFETSA KTNLNVEEVF FSIGRDIKQR
181 LSDTDSRAEP ATIKISQTDQ AAGAGQATQK SACCGT
//