LOCUS AEE78104.1 130 aa PRT PLN 23-MAR-2023
DEFINITION Arabidopsis thaliana ribosomal protein S15A D protein.
ACCESSION CP002686-6224
PROTEIN_ID AEE78104.1
SOURCE Arabidopsis thaliana (thale cress)
ORGANISM Arabidopsis thaliana
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
Pentapetalae; rosids; malvids; Brassicales; Brassicaceae;
Camelineae; Arabidopsis.
REFERENCE 1 (bases 1 to 23459830)
AUTHORS Salanoubat,M., Lemcke,K., Rieger,M., Ansorge,W., Unseld,M.,
Fartmann,B., Valle,G., Blocker,H., Perez-Alonso,M., Obermaier,B.,
Delseny,M., Boutry,M., Grivell,L.A., Mache,R., Puigdomenech,P., De
Simone,V., Choisne,N., Artiguenave,F., Robert,C., Brottier,P.,
Wincker,P., Cattolico,L., Weissenbach,J., Saurin,W., Quetier,F.,
Schafer,M., Muller-Auer,S., Gabel,C., Fuchs,M., Benes,V.,
Wurmbach,E., Drzonek,H., Erfle,H., Jordan,N., Bangert,S.,
Wiedelmann,R., Kranz,H., Voss,H., Holland,R., Brandt,P.,
Nyakatura,G., Vezzi,A., D'Angelo,M., Pallavicini,A., Toppo,S.,
Simionati,B., Conrad,A., Hornischer,K., Kauer,G., Lohnert,T.H.,
Nordsiek,G., Reichelt,J., Scharfe,M., Schon,O., Bargues,M.,
Terol,J., Climent,J., Navarro,P., Collado,C., Perez-Perez,A.,
Ottenwalder,B., Duchemin,D., Cooke,R., Laudie,M., Berger-Llauro,C.,
Purnelle,B., Masuy,D., de Haan,M., Maarse,A.C., Alcaraz,J.P.,
Cottet,A., Casacuberta,E., Monfort,A., Argiriou,A., flores,M.,
Liguori,R., Vitale,D., Mannhaupt,G., Haase,D., Schoof,H., Rudd,S.,
Zaccaria,P., Mewes,H.W., Mayer,K.F., Kaul,S., Town,C.D., Koo,H.L.,
Tallon,L.J., Jenkins,J., Rooney,T., Rizzo,M., Walts,A.,
Utterback,T., Fujii,C.Y., Shea,T.P., Creasy,T.H., Haas,B.,
Maiti,R., Wu,D., Peterson,J., Van Aken,S., Pai,G., Militscher,J.,
Sellers,P., Gill,J.E., Feldblyum,T.V., Preuss,D., Lin,X.,
Nierman,W.C., Salzberg,S.L., White,O., Venter,J.C., Fraser,C.M.,
Kaneko,T., Nakamura,Y., Sato,S., Kato,T., Asamizu,E., Sasamoto,S.,
Kimura,T., Idesawa,K., Kawashima,K., Kishida,Y., Kiyokawa,C.,
Kohara,M., Matsumoto,M., Matsuno,A., Muraki,A., Nakayama,S.,
Nakazaki,N., Shinpo,S., Takeuchi,C., Wada,T., Watanabe,A.,
Yamada,M., Yasuda,M. and Tabata,S.
CONSRTM European Union Chromosome 3 Arabidopsis Sequencing Consortium;
Institute for Genomic Research; Kazusa DNA Research Institute
TITLE Sequence and analysis of chromosome 3 of the plant Arabidopsis
thaliana
JOURNAL Nature 408 (6814), 820-822 (2000)
PUBMED 11130713
REFERENCE 2 (bases 1 to 23459830)
AUTHORS Swarbreck,D., Lamesch,P., Wilks,C. and Huala,E.
CONSRTM TAIR
TITLE Direct Submission
JOURNAL Submitted (18-FEB-2011) Department of Plant Biology, Carnegie
Institution, 260 Panama Street, Stanford, CA, USA
REFERENCE 3 (bases 1 to 23459830)
AUTHORS Krishnakumar,V., Cheng,C.-Y., Chan,A.P., Schobel,S., Kim,M.,
Ferlanti,E.S., Belyaeva,I., Rosen,B.D., Micklem,G., Miller,J.R.,
Vaughn,M. and Town,C.D.
TITLE Direct Submission
JOURNAL Submitted (17-MAY-2016) Plant Genomics, J. Craig Venter Institute,
9704 Medical Center Dr, Rockville, MD 20850, USA
REMARK Protein update by submitter
FEATURES Qualifiers
source /organism="Arabidopsis thaliana"
/mol_type="genomic DNA"
/db_xref="taxon:3702"
/chromosome="3"
/ecotype="Columbia"
protein /gene="RPS15AD"
/locus_tag="AT3G46040"
/gene_synonym="ribosomal protein S15A D"
/inference="Similar to RNA sequence,
EST:INSD:BP845894.1,INSD:EG454882.1,INSD:EL023029.1,
INSD:ES172394.1,INSD:BP663023.1,INSD:BP812081.1,
INSD:AW004284.1,INSD:EH851100.1,INSD:EL288733.1,
INSD:EL987800.1,INSD:EH939032.1,INSD:ES190279.1,
INSD:BP827944.1,INSD:ES077782.1,INSD:EG432671.1,
INSD:BP860087.1,INSD:EL980883.1,INSD:AV819910.1,
INSD:ES178112.1,INSD:ES053074.1,INSD:ES170302.1,
INSD:BP569651.1,INSD:EL145849.1,INSD:EG445035.1,
INSD:AV804857.1,INSD:BP610554.1,INSD:BP580283.1,
INSD:BP802533.1,INSD:EG444325.1,INSD:AV784595.1,
INSD:DR307902.1,INSD:BP566361.1,INSD:BE038752.1,
INSD:EL088961.1,INSD:BP639717.1,INSD:ES041009.1,
INSD:BP595688.1,INSD:BP835790.1,INSD:EG505233.1,
INSD:EL967661.1,INSD:AV828240.1,INSD:EL077447.1,
INSD:EL071623.1,INSD:DR307896.1,INSD:BP864363.1,
INSD:ES145991.1,INSD:EL106836.1,INSD:EL243831.1,
INSD:BP597931.1,INSD:BP826190.1,INSD:BP639606.1,
INSD:EG445797.1,INSD:EG505234.1,INSD:BP662742.1,
INSD:EL014033.1,INSD:BP561048.1,INSD:ES104385.1,
INSD:DR307908.1,INSD:BP629368.1,INSD:BP663106.1,
INSD:EL210803.1,INSD:BP856246.1,INSD:EL011635.1,
INSD:BP844825.1,INSD:BP652978.1,INSD:ES013041.1,
INSD:EH803383.1,INSD:BP840093.1,INSD:EL296795.1,
INSD:AV802872.1,INSD:ES209973.1,INSD:ES056086.1,
INSD:DR307905.1,INSD:BP798814.1,INSD:EG491202.1,
INSD:T21234.1,INSD:BP576280.1,INSD:EL109004.1,
INSD:BP661330.1,INSD:BP579939.1,INSD:BP582239.1,
INSD:EL968895.1,INSD:DR307906.1,INSD:EG454881.1,
INSD:BP858170.1,INSD:ES163229.1,INSD:ES159400.1,
INSD:BP569122.1,INSD:BP666728.1,INSD:BP804406.1,
INSD:ES106104.1,INSD:BP846911.1,INSD:BP849815.1,
INSD:T45473.1,INSD:BP591998.1,INSD:BP830790.1,
INSD:BP579619.1,INSD:ES132179.1,INSD:EL967794.1,
INSD:BP844416.1,INSD:BP671431.1,INSD:DR307907.1,
INSD:BP654494.1,INSD:DR307899.1,INSD:BP588379.1,
INSD:BP829043.1,INSD:BP636710.1,INSD:BP584736.1,
INSD:BP650370.1,INSD:DR307904.1,INSD:BP830596.1,
INSD:EH834305.1,INSD:BP637976.1,INSD:EH934757.1,
INSD:DR307901.1"
/inference="Similar to RNA sequence,
mRNA:INSD:BX825952.1,INSD:AY045837.1,INSD:BX822473.1,
INSD:BX822905.1,INSD:BX822971.1,INSD:AY091373.1"
/note="ribosomal protein S15A D (RPS15AD); FUNCTIONS IN:
structural constituent of ribosome; INVOLVED IN:
translation; LOCATED IN: cytosolic small ribosomal
subunit, cytosolic ribosome; EXPRESSED IN: 25 plant
structures; EXPRESSED DURING: 15 growth stages; CONTAINS
InterPro DOMAIN/s: Ribosomal protein S8
(InterPro:IPR000630); BEST Arabidopsis thaliana protein
match is: Ribosomal protein S8 family protein
(TAIR:AT5G59850.1); Has 3503 Blast hits to 3503 proteins
in 1362 species: Archae - 277; Bacteria - 1878; Metazoa -
431; Fungi - 223; Plants - 255; Viruses - 0; Other
Eukaryotes - 439 (source: NCBI BLink)."
/db_xref="TAIR:AT3G46040"
/db_xref="Araport:AT3G46040"
intron_pos 45:1 (1/2)
intron_pos 99:0 (2/2)
BEGIN
1 MVRISVLNDG LKSMYNAEKR GKRQVMIRPS SKVIIKFLIV MQKHGYIGEF EYVDDHRSGK
61 IVVELNGRLN KCGVISPRFD VGVKEIEGWT ARLLPSRQFG FIVLTTSAGI MDHEEARRKN
121 VGGKVLGFFY
//