LOCUS AEE78097.1 150 aa PRT PLN 23-MAR-2023
DEFINITION Arabidopsis thaliana Histone superfamily protein protein.
ACCESSION CP002686-6215
PROTEIN_ID AEE78097.1
SOURCE Arabidopsis thaliana (thale cress)
ORGANISM Arabidopsis thaliana
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
Pentapetalae; rosids; malvids; Brassicales; Brassicaceae;
Camelineae; Arabidopsis.
REFERENCE 1 (bases 1 to 23459830)
AUTHORS Salanoubat,M., Lemcke,K., Rieger,M., Ansorge,W., Unseld,M.,
Fartmann,B., Valle,G., Blocker,H., Perez-Alonso,M., Obermaier,B.,
Delseny,M., Boutry,M., Grivell,L.A., Mache,R., Puigdomenech,P., De
Simone,V., Choisne,N., Artiguenave,F., Robert,C., Brottier,P.,
Wincker,P., Cattolico,L., Weissenbach,J., Saurin,W., Quetier,F.,
Schafer,M., Muller-Auer,S., Gabel,C., Fuchs,M., Benes,V.,
Wurmbach,E., Drzonek,H., Erfle,H., Jordan,N., Bangert,S.,
Wiedelmann,R., Kranz,H., Voss,H., Holland,R., Brandt,P.,
Nyakatura,G., Vezzi,A., D'Angelo,M., Pallavicini,A., Toppo,S.,
Simionati,B., Conrad,A., Hornischer,K., Kauer,G., Lohnert,T.H.,
Nordsiek,G., Reichelt,J., Scharfe,M., Schon,O., Bargues,M.,
Terol,J., Climent,J., Navarro,P., Collado,C., Perez-Perez,A.,
Ottenwalder,B., Duchemin,D., Cooke,R., Laudie,M., Berger-Llauro,C.,
Purnelle,B., Masuy,D., de Haan,M., Maarse,A.C., Alcaraz,J.P.,
Cottet,A., Casacuberta,E., Monfort,A., Argiriou,A., flores,M.,
Liguori,R., Vitale,D., Mannhaupt,G., Haase,D., Schoof,H., Rudd,S.,
Zaccaria,P., Mewes,H.W., Mayer,K.F., Kaul,S., Town,C.D., Koo,H.L.,
Tallon,L.J., Jenkins,J., Rooney,T., Rizzo,M., Walts,A.,
Utterback,T., Fujii,C.Y., Shea,T.P., Creasy,T.H., Haas,B.,
Maiti,R., Wu,D., Peterson,J., Van Aken,S., Pai,G., Militscher,J.,
Sellers,P., Gill,J.E., Feldblyum,T.V., Preuss,D., Lin,X.,
Nierman,W.C., Salzberg,S.L., White,O., Venter,J.C., Fraser,C.M.,
Kaneko,T., Nakamura,Y., Sato,S., Kato,T., Asamizu,E., Sasamoto,S.,
Kimura,T., Idesawa,K., Kawashima,K., Kishida,Y., Kiyokawa,C.,
Kohara,M., Matsumoto,M., Matsuno,A., Muraki,A., Nakayama,S.,
Nakazaki,N., Shinpo,S., Takeuchi,C., Wada,T., Watanabe,A.,
Yamada,M., Yasuda,M. and Tabata,S.
CONSRTM European Union Chromosome 3 Arabidopsis Sequencing Consortium;
Institute for Genomic Research; Kazusa DNA Research Institute
TITLE Sequence and analysis of chromosome 3 of the plant Arabidopsis
thaliana
JOURNAL Nature 408 (6814), 820-822 (2000)
PUBMED 11130713
REFERENCE 2 (bases 1 to 23459830)
AUTHORS Swarbreck,D., Lamesch,P., Wilks,C. and Huala,E.
CONSRTM TAIR
TITLE Direct Submission
JOURNAL Submitted (18-FEB-2011) Department of Plant Biology, Carnegie
Institution, 260 Panama Street, Stanford, CA, USA
REFERENCE 3 (bases 1 to 23459830)
AUTHORS Krishnakumar,V., Cheng,C.-Y., Chan,A.P., Schobel,S., Kim,M.,
Ferlanti,E.S., Belyaeva,I., Rosen,B.D., Micklem,G., Miller,J.R.,
Vaughn,M. and Town,C.D.
TITLE Direct Submission
JOURNAL Submitted (17-MAY-2016) Plant Genomics, J. Craig Venter Institute,
9704 Medical Center Dr, Rockville, MD 20850, USA
REMARK Protein update by submitter
FEATURES Qualifiers
source /organism="Arabidopsis thaliana"
/mol_type="genomic DNA"
/db_xref="taxon:3702"
/chromosome="3"
/ecotype="Columbia"
protein /gene="HTB9"
/locus_tag="AT3G45980"
/gene_synonym="H2B"
/gene_synonym="HISTONE 2B"
/gene_synonym="HISTONE H2B"
/inference="Similar to RNA sequence,
EST:INSD:DR325204.1,INSD:ES169524.1,INSD:ES192260.1,
INSD:EL245576.1,INSD:DR325228.1,INSD:EL179734.1,
INSD:DR325325.1,INSD:ES022956.1,INSD:DR325302.1,
INSD:DR325234.1,INSD:DR325266.1,INSD:DR209838.1,
INSD:DR325237.1,INSD:DR325232.1,INSD:ES019403.1,
INSD:ES061592.1,INSD:EL246946.1,INSD:EL163971.1,
INSD:DR325281.1,INSD:DR325244.1,INSD:DR325322.1,
INSD:CK121285.1,INSD:ES040825.1,INSD:DR325226.1,
INSD:EL097079.1,INSD:EH869173.1,INSD:DR325310.1,
INSD:DR325312.1,INSD:EL011680.1,INSD:DR325197.1,
INSD:DR325279.1,INSD:EL327392.1,INSD:EL140705.1,
INSD:DR325297.1,INSD:ES005205.1,INSD:DR325306.1,
INSD:DR325299.1,INSD:EH857132.1,INSD:DR325274.1,
INSD:DR325272.1,INSD:EH950997.1,INSD:BP571003.1,
INSD:DR325208.1,INSD:DR325318.1,INSD:BP840182.1,
INSD:EL225918.1,INSD:EL183028.1,INSD:BP834871.1,
INSD:ES181914.1,INSD:DR325233.1,INSD:ES019307.1,
INSD:ES039504.1,INSD:EH988545.1,INSD:DR325346.1,
INSD:DR325263.1,INSD:DR325231.1,INSD:ES075252.1,
INSD:EL256152.1,INSD:DR325296.1,INSD:DR325288.1,
INSD:EH989306.1,INSD:BP561503.1,INSD:ES110874.1,
INSD:DR325255.1,INSD:DR325227.1,INSD:EH902688.1,
INSD:BP599053.1,INSD:DR325262.1,INSD:DR325305.1,
INSD:BP618914.1,INSD:BP810218.1,INSD:ES060351.1,
INSD:EL232213.1,INSD:CK117943.1,INSD:DR325256.1,
INSD:DR325224.1,INSD:DR325304.1,INSD:ES068676.1,
INSD:DR325260.1,INSD:AI100688.1,INSD:EG514816.1,
INSD:DR325320.1,INSD:DR325246.1,INSD:EH926260.1,
INSD:ES169341.1,INSD:DR325214.1,INSD:ES002782.1,
INSD:DR325289.1,INSD:ES155987.1,INSD:DR325273.1,
INSD:DR325245.1,INSD:DR325324.1,INSD:DR325229.1,
INSD:DR325215.1,INSD:DR325276.1,INSD:EL308532.1,
INSD:ES048279.1,INSD:DR325251.1,INSD:ES168846.1,
INSD:DR325314.1,INSD:ES064589.1,INSD:T45496.1,
INSD:DR325253.1,INSD:DR325213.1,INSD:DR325341.1,
INSD:BP823037.1,INSD:BP836150.1,INSD:CK118120.1,
INSD:DR374076.1,INSD:ES023644.1,INSD:DR325280.1,
INSD:EH983505.1,INSD:BP566991.1,INSD:DR325311.1,
INSD:BP667444.1,INSD:DR325236.1,INSD:ES021658.1,
INSD:EL312489.1,INSD:DR325202.1,INSD:DR375043.1,
INSD:DR325201.1,INSD:DR325327.1,INSD:DR325241.1,
INSD:EH916638.1,INSD:DR325261.1,INSD:CK121397.1,
INSD:DR325326.1,INSD:DR325271.1,INSD:DR325328.1,
INSD:DR325219.1,INSD:ES084018.1,INSD:DR325209.1,
INSD:ES071902.1,INSD:EL998223.1,INSD:DR325303.1,
INSD:DR325336.1,INSD:EL985795.1,INSD:BP596576.1,
INSD:BP836915.2,INSD:AI996548.1,INSD:EL105942.1,
INSD:DR325249.1,INSD:DR325298.1,INSD:DR325242.1,
INSD:DR325268.1,INSD:EL227578.1,INSD:DR325292.1,
INSD:DR325235.1,INSD:EL129531.1,INSD:EL969983.1,
INSD:BP636328.1,INSD:DR325345.1,INSD:DR325335.1,
INSD:EH836067.1,INSD:BP826623.1,INSD:DR325284.1,
INSD:EL981637.1,INSD:DR325223.1,INSD:DR325239.1,
INSD:DR325287.1,INSD:CK118052.1,INSD:EH826764.1,
INSD:AV785153.1,INSD:DR325331.1,INSD:EL158136.1,
INSD:EL232321.1,INSD:DR325212.1,INSD:BP796377.2,
INSD:AU235602.1,INSD:DR325286.1,INSD:DR325315.1,
INSD:ES179586.1,INSD:DR325198.1,INSD:AV566976.1,
INSD:EH930593.1,INSD:ES057453.1,INSD:DR325330.1,
INSD:DR325317.1,INSD:EL996886.1,INSD:ES137563.1,
INSD:DR374233.1,INSD:DR325333.1,INSD:ES000613.1,
INSD:EL117517.1,INSD:ES160997.1,INSD:ES136030.1,
INSD:EL983329.1,INSD:BP615745.1,INSD:DR325278.1,
INSD:BP568688.1,INSD:EL165361.1,INSD:AA395006.1,
INSD:BP590112.1,INSD:DR325216.1,INSD:DR325343.1,
INSD:DR325265.1,INSD:EL971853.1,INSD:DR325277.1,
INSD:EL073604.1,INSD:AV552384.1,INSD:CK119155.1,
INSD:DR325316.1,INSD:DR325293.1,INSD:DR325342.1,
INSD:DR325211.1,INSD:EL060367.1,INSD:ES191960.1,
INSD:DR325207.1,INSD:DR325300.1,INSD:ES110502.1,
INSD:EL997647.1,INSD:R29809.1,INSD:CK117978.1,
INSD:DR325338.1,INSD:DR325283.1,INSD:DR325269.1,
INSD:DR325257.1,INSD:BP641660.1,INSD:BP660106.1,
INSD:EH969288.1,INSD:DR325285.1,INSD:DR325301.1,
INSD:DR325340.1,INSD:DR325321.1,INSD:EH875369.1,
INSD:DR325282.1,INSD:DR325347.1,INSD:ES044731.1,
INSD:DR325319.1,INSD:DR325291.1,INSD:DR325252.1,
INSD:DR325218.1,INSD:ES067271.1,INSD:DR325339.1,
INSD:BP639365.1,INSD:DR325334.1,INSD:DR325295.1,
INSD:EG482068.1,INSD:DR325258.1,INSD:DR325238.1,
INSD:DR325348.1,INSD:EL254944.1,INSD:DR325323.1,
INSD:ES095131.1,INSD:ES009610.1,INSD:DR325308.1,
INSD:EH896890.1,INSD:EH853218.1,INSD:BP831315.1,
INSD:ES207765.1,INSD:CK119134.1,INSD:BP815526.1,
INSD:DR325200.1,INSD:EH829433.1,INSD:DR325199.1,
INSD:EL329609.1,INSD:BP571920.1,INSD:BP621225.1,
INSD:ES062921.1,INSD:EH927168.1,INSD:DR325344.1,
INSD:DR325307.1,INSD:EH859115.1,INSD:CK121854.1,
INSD:DR325290.1,INSD:DR325205.1,INSD:DR325267.1,
INSD:ES046505.1,INSD:BP639470.1,INSD:DR325294.1,
INSD:ES106020.1,INSD:BP634381.1,INSD:EL190929.1,
INSD:DR325222.1,INSD:DR325275.1,INSD:ES114609.1,
INSD:DR325230.1,INSD:EL292114.1,INSD:BP624421.1,
INSD:DR325247.1,INSD:ES128278.1,INSD:DR325203.1,
INSD:DR325254.1,INSD:DR325264.1,INSD:BP576224.1,
INSD:DR325250.1,INSD:DR325329.1,INSD:DR325259.1,
INSD:BP816537.1,INSD:EH907228.1,INSD:BP805281.1,
INSD:DR325337.1,INSD:DR325210.1,INSD:DR325217.1,
INSD:DR325313.1,INSD:EH911595.1,INSD:EL038738.1,
INSD:DR325225.1,INSD:DR325243.1,INSD:ES004836.1,
INSD:ES200879.1,INSD:EH814699.1,INSD:BP665269.1,
INSD:EL313705.1,INSD:DR325309.1,INSD:DR325240.1,
INSD:EL985543.1,INSD:DR325270.1,INSD:DR325248.1,
INSD:ES202380.1,INSD:EH913057.1,INSD:DR325220.1,
INSD:ES046449.1,INSD:EH925525.1,INSD:DR325221.1,
INSD:DR325206.1,INSD:EH991460.1,INSD:AU226337.1,
INSD:DR325332.1"
/inference="Similar to RNA sequence,
mRNA:INSD:AK227670.1,INSD:BX822784.1,INSD:BX824094.1,
INSD:AY087219.1,INSD:BT006400.1,INSD:Y12576.1"
/note="HTB9; FUNCTIONS IN: DNA binding; INVOLVED IN:
nucleosome assembly; LOCATED IN: nucleolus; EXPRESSED IN:
23 plant structures; EXPRESSED DURING: 13 growth stages;
CONTAINS InterPro DOMAIN/s: Histone H2B
(InterPro:IPR000558), Histone-fold (InterPro:IPR009072),
Histone core (InterPro:IPR007125); BEST Arabidopsis
thaliana protein match is: Histone superfamily protein
(TAIR:AT1G07790.1); Has 3616 Blast hits to 3469 proteins
in 351 species: Archae - 0; Bacteria - 64; Metazoa - 2275;
Fungi - 213; Plants - 487; Viruses - 0; Other Eukaryotes -
577 (source: NCBI BLink)."
/db_xref="TAIR:AT3G45980"
/db_xref="Araport:AT3G45980"
BEGIN
1 MAPRAEKKPA EKKPAAEKPV EEKSKAEKAP AEKKPKAGKK LPKEAGAGGD KKKKMKKKSV
61 ETYKIYIFKV LKQVHPDIGI SSKAMGIMNS FINDIFEKLA SESSKLARYN KKPTITSREI
121 QTAVRLVLPG ELAKHAVSEG TKAVTKFTSS
//