LOCUS AEE78096.1 265 aa PRT PLN 23-MAR-2023
DEFINITION Arabidopsis thaliana expansin-like A1 protein.
ACCESSION CP002686-6213
PROTEIN_ID AEE78096.1
SOURCE Arabidopsis thaliana (thale cress)
ORGANISM Arabidopsis thaliana
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
Pentapetalae; rosids; malvids; Brassicales; Brassicaceae;
Camelineae; Arabidopsis.
REFERENCE 1 (bases 1 to 23459830)
AUTHORS Salanoubat,M., Lemcke,K., Rieger,M., Ansorge,W., Unseld,M.,
Fartmann,B., Valle,G., Blocker,H., Perez-Alonso,M., Obermaier,B.,
Delseny,M., Boutry,M., Grivell,L.A., Mache,R., Puigdomenech,P., De
Simone,V., Choisne,N., Artiguenave,F., Robert,C., Brottier,P.,
Wincker,P., Cattolico,L., Weissenbach,J., Saurin,W., Quetier,F.,
Schafer,M., Muller-Auer,S., Gabel,C., Fuchs,M., Benes,V.,
Wurmbach,E., Drzonek,H., Erfle,H., Jordan,N., Bangert,S.,
Wiedelmann,R., Kranz,H., Voss,H., Holland,R., Brandt,P.,
Nyakatura,G., Vezzi,A., D'Angelo,M., Pallavicini,A., Toppo,S.,
Simionati,B., Conrad,A., Hornischer,K., Kauer,G., Lohnert,T.H.,
Nordsiek,G., Reichelt,J., Scharfe,M., Schon,O., Bargues,M.,
Terol,J., Climent,J., Navarro,P., Collado,C., Perez-Perez,A.,
Ottenwalder,B., Duchemin,D., Cooke,R., Laudie,M., Berger-Llauro,C.,
Purnelle,B., Masuy,D., de Haan,M., Maarse,A.C., Alcaraz,J.P.,
Cottet,A., Casacuberta,E., Monfort,A., Argiriou,A., flores,M.,
Liguori,R., Vitale,D., Mannhaupt,G., Haase,D., Schoof,H., Rudd,S.,
Zaccaria,P., Mewes,H.W., Mayer,K.F., Kaul,S., Town,C.D., Koo,H.L.,
Tallon,L.J., Jenkins,J., Rooney,T., Rizzo,M., Walts,A.,
Utterback,T., Fujii,C.Y., Shea,T.P., Creasy,T.H., Haas,B.,
Maiti,R., Wu,D., Peterson,J., Van Aken,S., Pai,G., Militscher,J.,
Sellers,P., Gill,J.E., Feldblyum,T.V., Preuss,D., Lin,X.,
Nierman,W.C., Salzberg,S.L., White,O., Venter,J.C., Fraser,C.M.,
Kaneko,T., Nakamura,Y., Sato,S., Kato,T., Asamizu,E., Sasamoto,S.,
Kimura,T., Idesawa,K., Kawashima,K., Kishida,Y., Kiyokawa,C.,
Kohara,M., Matsumoto,M., Matsuno,A., Muraki,A., Nakayama,S.,
Nakazaki,N., Shinpo,S., Takeuchi,C., Wada,T., Watanabe,A.,
Yamada,M., Yasuda,M. and Tabata,S.
CONSRTM European Union Chromosome 3 Arabidopsis Sequencing Consortium;
Institute for Genomic Research; Kazusa DNA Research Institute
TITLE Sequence and analysis of chromosome 3 of the plant Arabidopsis
thaliana
JOURNAL Nature 408 (6814), 820-822 (2000)
PUBMED 11130713
REFERENCE 2 (bases 1 to 23459830)
AUTHORS Swarbreck,D., Lamesch,P., Wilks,C. and Huala,E.
CONSRTM TAIR
TITLE Direct Submission
JOURNAL Submitted (18-FEB-2011) Department of Plant Biology, Carnegie
Institution, 260 Panama Street, Stanford, CA, USA
REFERENCE 3 (bases 1 to 23459830)
AUTHORS Krishnakumar,V., Cheng,C.-Y., Chan,A.P., Schobel,S., Kim,M.,
Ferlanti,E.S., Belyaeva,I., Rosen,B.D., Micklem,G., Miller,J.R.,
Vaughn,M. and Town,C.D.
TITLE Direct Submission
JOURNAL Submitted (17-MAY-2016) Plant Genomics, J. Craig Venter Institute,
9704 Medical Center Dr, Rockville, MD 20850, USA
REMARK Protein update by submitter
FEATURES Qualifiers
source /organism="Arabidopsis thaliana"
/mol_type="genomic DNA"
/db_xref="taxon:3702"
/chromosome="3"
/ecotype="Columbia"
protein /gene="EXLA1"
/locus_tag="AT3G45970"
/gene_synonym="ATEXLA1"
/gene_synonym="ATEXPL1"
/gene_synonym="ATHEXP BETA 2.1"
/gene_synonym="EXPANSIN L1"
/gene_synonym="expansin-like A1"
/gene_synonym="EXPL1"
/inference="Similar to RNA sequence,
EST:INSD:CK118052.1,INSD:EH923732.1,INSD:AV785153.1,
INSD:EL332210.1,INSD:BP829168.1,INSD:AV440941.1,
INSD:AV566976.1,INSD:CB256367.1,INSD:DR374233.1,
INSD:BP783715.1,INSD:EH993625.1,INSD:EH856960.1,
INSD:T41844.1,INSD:DR272515.1,INSD:EL044182.1,
INSD:BP615745.1,INSD:CB256351.1,INSD:EH946265.1,
INSD:DR272526.1,INSD:BP590112.1,INSD:AA395006.1,
INSD:AV555314.1,INSD:DR230594.1,INSD:BP601251.1,
INSD:BP669644.1,INSD:BP667885.1,INSD:BP862100.1,
INSD:DR272522.1,INSD:BP783003.1,INSD:AV442179.1,
INSD:EL060367.1,INSD:BP599793.1,INSD:CB252698.1,
INSD:CB256113.1,INSD:BP850381.1,INSD:AV824029.1,
INSD:BP599053.1,INSD:DR272524.1,INSD:DR272517.1,
INSD:AV781841.1,INSD:BP660106.1,INSD:BP618914.1,
INSD:BE037834.1,INSD:BP560562.2,INSD:EL087893.1,
INSD:BE526227.1,INSD:DR230593.1,INSD:EG454723.1,
INSD:EL166839.1,INSD:EL162565.1,INSD:CB255514.1,
INSD:AV567372.1,INSD:BP587690.1,INSD:DR230592.1,
INSD:DR272514.1,INSD:EG440432.1,INSD:DR272529.1,
INSD:DR272531.1,INSD:EH984045.1,INSD:ES015080.1,
INSD:DR272516.1,INSD:DR347137.1,INSD:EH896890.1,
INSD:AV789565.1,INSD:CB259906.1,INSD:EL076139.1,
INSD:AV555734.1,INSD:EL301753.1,INSD:DR272520.1,
INSD:CB254929.1,INSD:BP565391.1,INSD:EL270167.1,
INSD:BP866724.1,INSD:BP833862.1,INSD:CK118120.1,
INSD:DR272528.1,INSD:BP621225.1,INSD:BP845400.1,
INSD:BP833845.1,INSD:BP608723.1,INSD:BP791863.1,
INSD:BP639470.1,INSD:DR230595.1,INSD:AV543780.1,
INSD:DR215145.1,INSD:EH868529.1,INSD:BP661696.1,
INSD:BP843430.1,INSD:EH916638.1,INSD:BP816449.1,
INSD:Z17543.1,INSD:DR230591.1,INSD:DR272525.1,
INSD:BP786670.1,INSD:DR272530.1,INSD:DR272527.1,
INSD:EH944241.1,INSD:BP603117.1,INSD:AV799372.1,
INSD:DR215144.1,INSD:AI996548.1,INSD:EL987406.1,
INSD:BP570144.1,INSD:BP620676.1,INSD:BP841070.1,
INSD:BP619516.1,INSD:EL125716.1,INSD:AV536535.1,
INSD:DR272532.1,INSD:BP853571.1,INSD:DR272521.1"
/inference="Similar to RNA sequence,
mRNA:INSD:AY086768.1,INSD:AY052745.1,INSD:AF378896.1,
INSD:AY058142.1"
/note="expansin-like A1 (EXLA1); INVOLVED IN:
unidimensional cell growth, plant-type cell wall
loosening; LOCATED IN: cell wall, plant-type cell wall;
EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 10
growth stages; CONTAINS InterPro DOMAIN/s: Barwin-related
endoglucanase (InterPro:IPR009009), Pollen allergen,
N-terminal (InterPro:IPR014734), Rare lipoprotein A
(InterPro:IPR005132), Expansin/Lol pI
(InterPro:IPR007118), Expansin 45, endoglucanase-like
(InterPro:IPR007112), Pollen allergen/expansin, C-terminal
(InterPro:IPR007117); BEST Arabidopsis thaliana protein
match is: expansin-like A3 (TAIR:AT3G45960.2); Has 1876
Blast hits to 1873 proteins in 122 species: Archae - 0;
Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 1870;
Viruses - 0; Other Eukaryotes - 6 (source: NCBI BLink)."
/db_xref="TAIR:AT3G45970"
/db_xref="Araport:AT3G45970"
intron_pos 41:1 (1/2)
intron_pos 139:2 (2/2)
BEGIN
1 MGSFLFLIVV IFLFSSSVNA CDRCLHRSKA AYFSSASALS SGACAYGSMA TSFFAGHIAA
61 AIPSIYKDGA GCGACFQVRC KNPKLCSTKG TIVMITDLNK SNQTDLVLSS RAFRAMAKPI
121 VGADKDLLKQ GIVDIEYQRV PCDYGNKNMN VRVEEASKKP NYLEIKLLYQ GGQTEVVSID
181 IAQVGSSPNW GYMTRSHGAV WVTDKVPTGA IQFRFVVTGG YDGKMIWSQS VLPSNWEAGK
241 IYDAGVQITD IAQEGCDPCD AHIWN
//