LOCUS AEE78072.1 996 aa PRT PLN 23-MAR-2023
DEFINITION Arabidopsis thaliana phototropin 1 protein.
ACCESSION CP002686-6181
PROTEIN_ID AEE78072.1
SOURCE Arabidopsis thaliana (thale cress)
ORGANISM Arabidopsis thaliana
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
Pentapetalae; rosids; malvids; Brassicales; Brassicaceae;
Camelineae; Arabidopsis.
REFERENCE 1 (bases 1 to 23459830)
AUTHORS Salanoubat,M., Lemcke,K., Rieger,M., Ansorge,W., Unseld,M.,
Fartmann,B., Valle,G., Blocker,H., Perez-Alonso,M., Obermaier,B.,
Delseny,M., Boutry,M., Grivell,L.A., Mache,R., Puigdomenech,P., De
Simone,V., Choisne,N., Artiguenave,F., Robert,C., Brottier,P.,
Wincker,P., Cattolico,L., Weissenbach,J., Saurin,W., Quetier,F.,
Schafer,M., Muller-Auer,S., Gabel,C., Fuchs,M., Benes,V.,
Wurmbach,E., Drzonek,H., Erfle,H., Jordan,N., Bangert,S.,
Wiedelmann,R., Kranz,H., Voss,H., Holland,R., Brandt,P.,
Nyakatura,G., Vezzi,A., D'Angelo,M., Pallavicini,A., Toppo,S.,
Simionati,B., Conrad,A., Hornischer,K., Kauer,G., Lohnert,T.H.,
Nordsiek,G., Reichelt,J., Scharfe,M., Schon,O., Bargues,M.,
Terol,J., Climent,J., Navarro,P., Collado,C., Perez-Perez,A.,
Ottenwalder,B., Duchemin,D., Cooke,R., Laudie,M., Berger-Llauro,C.,
Purnelle,B., Masuy,D., de Haan,M., Maarse,A.C., Alcaraz,J.P.,
Cottet,A., Casacuberta,E., Monfort,A., Argiriou,A., flores,M.,
Liguori,R., Vitale,D., Mannhaupt,G., Haase,D., Schoof,H., Rudd,S.,
Zaccaria,P., Mewes,H.W., Mayer,K.F., Kaul,S., Town,C.D., Koo,H.L.,
Tallon,L.J., Jenkins,J., Rooney,T., Rizzo,M., Walts,A.,
Utterback,T., Fujii,C.Y., Shea,T.P., Creasy,T.H., Haas,B.,
Maiti,R., Wu,D., Peterson,J., Van Aken,S., Pai,G., Militscher,J.,
Sellers,P., Gill,J.E., Feldblyum,T.V., Preuss,D., Lin,X.,
Nierman,W.C., Salzberg,S.L., White,O., Venter,J.C., Fraser,C.M.,
Kaneko,T., Nakamura,Y., Sato,S., Kato,T., Asamizu,E., Sasamoto,S.,
Kimura,T., Idesawa,K., Kawashima,K., Kishida,Y., Kiyokawa,C.,
Kohara,M., Matsumoto,M., Matsuno,A., Muraki,A., Nakayama,S.,
Nakazaki,N., Shinpo,S., Takeuchi,C., Wada,T., Watanabe,A.,
Yamada,M., Yasuda,M. and Tabata,S.
CONSRTM European Union Chromosome 3 Arabidopsis Sequencing Consortium;
Institute for Genomic Research; Kazusa DNA Research Institute
TITLE Sequence and analysis of chromosome 3 of the plant Arabidopsis
thaliana
JOURNAL Nature 408 (6814), 820-822 (2000)
PUBMED 11130713
REFERENCE 2 (bases 1 to 23459830)
AUTHORS Swarbreck,D., Lamesch,P., Wilks,C. and Huala,E.
CONSRTM TAIR
TITLE Direct Submission
JOURNAL Submitted (18-FEB-2011) Department of Plant Biology, Carnegie
Institution, 260 Panama Street, Stanford, CA, USA
REFERENCE 3 (bases 1 to 23459830)
AUTHORS Krishnakumar,V., Cheng,C.-Y., Chan,A.P., Schobel,S., Kim,M.,
Ferlanti,E.S., Belyaeva,I., Rosen,B.D., Micklem,G., Miller,J.R.,
Vaughn,M. and Town,C.D.
TITLE Direct Submission
JOURNAL Submitted (17-MAY-2016) Plant Genomics, J. Craig Venter Institute,
9704 Medical Center Dr, Rockville, MD 20850, USA
REMARK Protein update by submitter
FEATURES Qualifiers
source /organism="Arabidopsis thaliana"
/mol_type="genomic DNA"
/db_xref="taxon:3702"
/chromosome="3"
/ecotype="Columbia"
protein /gene="PHOT1"
/locus_tag="AT3G45780"
/gene_synonym="F16L2.3"
/gene_synonym="JK224"
/gene_synonym="NONPHOTOTROPIC HYPOCOTYL 1"
/gene_synonym="NPH1"
/gene_synonym="PHOTOTROPIN"
/gene_synonym="phototropin 1"
/gene_synonym="ROOT PHOTOTROPISM 1"
/gene_synonym="RPT1"
/inference="Similar to RNA sequence,
EST:INSD:EL252671.1,INSD:BP618092.1,INSD:EH819158.1,
INSD:EL216257.1,INSD:BP600287.1,INSD:BP791224.1,
INSD:EH897128.1,INSD:EG505762.1,INSD:EH855190.1,
INSD:DR383617.1,INSD:EL165796.1,INSD:EL247129.1,
INSD:BP616418.1,INSD:BP610715.1,INSD:BP613312.1,
INSD:EL201440.1,INSD:EL112834.1,INSD:EH970830.1,
INSD:EL197999.1,INSD:W43664.1,INSD:EL134305.1,
INSD:BP795476.1,INSD:BP619202.1,INSD:EL341053.1,
INSD:W43789.1,INSD:EH965058.1,INSD:BP660499.1,
INSD:AV528753.1,INSD:EH900911.1,INSD:EL341690.1,
INSD:BP616867.1,INSD:EL043438.1,INSD:EL128813.1,
INSD:EL135860.1,INSD:EG505768.1,INSD:EH909496.1,
INSD:BP789758.1,INSD:BP614611.1,INSD:EH810013.1,
INSD:EL049632.1,INSD:EH913076.1,INSD:BP598229.1,
INSD:AV548600.1,INSD:EH870460.1,INSD:EL032232.1,
INSD:BP608479.1,INSD:EL264496.1,INSD:BP598756.1,
INSD:BP779517.1,INSD:BP607161.1,INSD:BP614845.1,
INSD:BP789472.1,INSD:BP615552.1,INSD:EL180730.1,
INSD:BP644275.1,INSD:EL221370.1,INSD:EL301982.1,
INSD:BP602810.1,INSD:BP597833.1,INSD:BP617174.1,
INSD:BP591990.1,INSD:AV441447.1,INSD:EL187797.1,
INSD:EH992010.1,INSD:EG463689.1,INSD:BP602426.1,
INSD:AV786458.1,INSD:EH936078.1,INSD:EL200321.1,
INSD:BP600617.1,INSD:AV528814.1,INSD:EH862231.1,
INSD:BP615740.1,INSD:EL155508.1,INSD:BP603772.1,
INSD:BP633275.1,INSD:EL076145.1,INSD:EH912180.1,
INSD:EL297652.1,INSD:BP778955.1,INSD:BP618965.1,
INSD:EL101756.1,INSD:AV523376.1,INSD:EL313711.1,
INSD:AV806748.1,INSD:AV523859.1,INSD:BP599766.1,
INSD:BP598095.1,INSD:AV798698.1,INSD:EH807772.1,
INSD:EG505767.1,INSD:EH925851.1,INSD:EL273178.1,
INSD:AV813844.1,INSD:BP619827.1,INSD:BP597903.1,
INSD:BP794261.1,INSD:EL101230.1,INSD:EH825186.1,
INSD:BP631673.1,INSD:BP777347.1,INSD:BP636673.1,
INSD:EL070553.1,INSD:AV814333.1,INSD:EL213893.1,
INSD:BP606301.1,INSD:EL275363.1,INSD:BP618164.1,
INSD:BP591814.1,INSD:EL208056.1,INSD:EL018553.1,
INSD:AV523433.1,INSD:EL158929.1,INSD:EL255818.1,
INSD:BP617354.1,INSD:EH815708.1,INSD:EL066141.1,
INSD:BP601973.1,INSD:EL023984.1,INSD:BP651522.1,
INSD:AV529105.1,INSD:BP601042.1,INSD:EL001619.1,
INSD:BP635277.1,INSD:EL062203.1,INSD:EL004235.1,
INSD:BP611715.1,INSD:BP600541.1,INSD:BP592784.1,
INSD:BX837922.1,INSD:AV529038.1,INSD:BP629817.1,
INSD:DR354139.1,INSD:BP646283.1,INSD:BP611132.1,
INSD:EH873172.1,INSD:AI999585.1,INSD:EL131983.1,
INSD:EL069301.1"
/inference="Similar to RNA sequence,
mRNA:INSD:AY040062.1,INSD:AF030864.1"
/note="phototropin 1 (PHOT1); FUNCTIONS IN: protein
binding, protein serine/threonine kinase activity, FMN
binding, kinase activity, blue light photoreceptor
activity; INVOLVED IN: in 8 processes; LOCATED IN:
internal side of plasma membrane, vacuole, cytoplasm;
EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13
growth stages; CONTAINS InterPro DOMAIN/s: PAC motif
(InterPro:IPR001610), Protein kinase, ATP binding site
(InterPro:IPR017441), Serine/threonine-protein kinase
domain (InterPro:IPR002290), PAS fold
(InterPro:IPR013767), PAS (InterPro:IPR000014),
PAS-associated, C-terminal (InterPro:IPR000700),
Serine/threonine-protein kinase-like domain
(InterPro:IPR017442), Protein kinase-like domain
(InterPro:IPR011009), Serine/threonine-protein kinase,
active site (InterPro:IPR008271), Protein kinase,
catalytic domain (InterPro:IPR000719); BEST Arabidopsis
thaliana protein match is: phototropin 2
(TAIR:AT5G58140.1); Has 112705 Blast hits to 107868
proteins in 3419 species: Archae - 296; Bacteria - 19357;
Metazoa - 40871; Fungi - 12339; Plants - 20501; Viruses -
442; Other Eukaryotes - 18899 (source: NCBI BLink)."
/db_xref="TAIR:AT3G45780"
/db_xref="Araport:AT3G45780"
intron_pos 234:2 (1/19)
intron_pos 295:2 (2/19)
intron_pos 326:1 (3/19)
intron_pos 415:2 (4/19)
intron_pos 490:0 (5/19)
intron_pos 513:2 (6/19)
intron_pos 549:1 (7/19)
intron_pos 566:0 (8/19)
intron_pos 601:0 (9/19)
intron_pos 621:0 (10/19)
intron_pos 676:2 (11/19)
intron_pos 705:0 (12/19)
intron_pos 732:0 (13/19)
intron_pos 766:2 (14/19)
intron_pos 783:1 (15/19)
intron_pos 819:0 (16/19)
intron_pos 862:0 (17/19)
intron_pos 917:0 (18/19)
intron_pos 964:0 (19/19)
BEGIN
1 MEPTEKPSTK PSSRTLPRDT RGSLEVFNPS TQLTRPDNPV FRPEPPAWQN LSDPRGTSPQ
61 PRPQQEPAPS NPVRSDQEIA VTTSWMALKD PSPETISKKT ITAEKPQKSA VAAEQRAAEW
121 GLVLKTDTKT GKPQGVGVRN SGGTENDPNG KKTTSQRNSQ NSCRSSGEMS DGDVPGGRSG
181 IPRVSEDLKD ALSTFQQTFV VSDATKPDYP IMYASAGFFN MTGYTSKEVV GRNCRFLQGS
241 GTDADELAKI RETLAAGNNY CGRILNYKKD GTSFWNLLTI APIKDESGKV LKFIGMQVEV
301 SKHTEGAKEK ALRPNGLPES LIRYDARQKD MATNSVTELV EAVKRPRALS ESTNLHPFMT
361 KSESDELPKK PARRMSENVV PSGRRNSGGG RRNSMQRINE IPEKKSRKSS LSFMGIKKKS
421 ESLDESIDDG FIEYGEEDDE ISDRDERPES VDDKVRQKEM RKGIDLATTL ERIEKNFVIT
481 DPRLPDNPII FASDSFLELT EYSREEILGR NCRFLQGPET DLTTVKKIRN AIDNQTEVTV
541 QLINYTKSGK KFWNIFHLQP MRDQKGEVQY FIGVQLDGSK HVEPVRNVIE ETAVKEGEDL
601 VKKTAVNIDE AVRELPDANM TPEDLWANHS KVVHCKPHRK DSPPWIAIQK VLESGEPIGL
661 KHFKPVKPLG SGDTGSVHLV ELVGTDQLFA MKAMDKAVML NRNKVHRARA EREILDLLDH
721 PFLPALYASF QTKTHICLIT DYYPGGELFM LLDRQPRKVL KEDAVRFYAA QVVVALEYLH
781 CQGIIYRDLK PENVLIQGNG DISLSDFDLS CLTSCKPQLL IPSIDEKKKK KQQKSQQTPI
841 FMAEPMRASN SFVGTEEYIA PEIISGAGHT SAVDWWALGI LMYEMLYGYT PFRGKTRQKT
901 FTNVLQKDLK FPASIPASLQ VKQLIFRLLQ RDPKKRLGCF EGANEVKQHS FFKGINWALI
961 RCTNPPELET PIFSGEAENG EKVVDPELED LQTNVF
//