LOCUS AEE78008.1 396 aa PRT PLN 23-MAR-2023
DEFINITION Arabidopsis thaliana geminivirus rep interacting kinase 1 protein.
ACCESSION CP002686-6100
PROTEIN_ID AEE78008.1
SOURCE Arabidopsis thaliana (thale cress)
ORGANISM Arabidopsis thaliana
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
Pentapetalae; rosids; malvids; Brassicales; Brassicaceae;
Camelineae; Arabidopsis.
REFERENCE 1 (bases 1 to 23459830)
AUTHORS Salanoubat,M., Lemcke,K., Rieger,M., Ansorge,W., Unseld,M.,
Fartmann,B., Valle,G., Blocker,H., Perez-Alonso,M., Obermaier,B.,
Delseny,M., Boutry,M., Grivell,L.A., Mache,R., Puigdomenech,P., De
Simone,V., Choisne,N., Artiguenave,F., Robert,C., Brottier,P.,
Wincker,P., Cattolico,L., Weissenbach,J., Saurin,W., Quetier,F.,
Schafer,M., Muller-Auer,S., Gabel,C., Fuchs,M., Benes,V.,
Wurmbach,E., Drzonek,H., Erfle,H., Jordan,N., Bangert,S.,
Wiedelmann,R., Kranz,H., Voss,H., Holland,R., Brandt,P.,
Nyakatura,G., Vezzi,A., D'Angelo,M., Pallavicini,A., Toppo,S.,
Simionati,B., Conrad,A., Hornischer,K., Kauer,G., Lohnert,T.H.,
Nordsiek,G., Reichelt,J., Scharfe,M., Schon,O., Bargues,M.,
Terol,J., Climent,J., Navarro,P., Collado,C., Perez-Perez,A.,
Ottenwalder,B., Duchemin,D., Cooke,R., Laudie,M., Berger-Llauro,C.,
Purnelle,B., Masuy,D., de Haan,M., Maarse,A.C., Alcaraz,J.P.,
Cottet,A., Casacuberta,E., Monfort,A., Argiriou,A., flores,M.,
Liguori,R., Vitale,D., Mannhaupt,G., Haase,D., Schoof,H., Rudd,S.,
Zaccaria,P., Mewes,H.W., Mayer,K.F., Kaul,S., Town,C.D., Koo,H.L.,
Tallon,L.J., Jenkins,J., Rooney,T., Rizzo,M., Walts,A.,
Utterback,T., Fujii,C.Y., Shea,T.P., Creasy,T.H., Haas,B.,
Maiti,R., Wu,D., Peterson,J., Van Aken,S., Pai,G., Militscher,J.,
Sellers,P., Gill,J.E., Feldblyum,T.V., Preuss,D., Lin,X.,
Nierman,W.C., Salzberg,S.L., White,O., Venter,J.C., Fraser,C.M.,
Kaneko,T., Nakamura,Y., Sato,S., Kato,T., Asamizu,E., Sasamoto,S.,
Kimura,T., Idesawa,K., Kawashima,K., Kishida,Y., Kiyokawa,C.,
Kohara,M., Matsumoto,M., Matsuno,A., Muraki,A., Nakayama,S.,
Nakazaki,N., Shinpo,S., Takeuchi,C., Wada,T., Watanabe,A.,
Yamada,M., Yasuda,M. and Tabata,S.
CONSRTM European Union Chromosome 3 Arabidopsis Sequencing Consortium;
Institute for Genomic Research; Kazusa DNA Research Institute
TITLE Sequence and analysis of chromosome 3 of the plant Arabidopsis
thaliana
JOURNAL Nature 408 (6814), 820-822 (2000)
PUBMED 11130713
REFERENCE 2 (bases 1 to 23459830)
AUTHORS Swarbreck,D., Lamesch,P., Wilks,C. and Huala,E.
CONSRTM TAIR
TITLE Direct Submission
JOURNAL Submitted (18-FEB-2011) Department of Plant Biology, Carnegie
Institution, 260 Panama Street, Stanford, CA, USA
REFERENCE 3 (bases 1 to 23459830)
AUTHORS Krishnakumar,V., Cheng,C.-Y., Chan,A.P., Schobel,S., Kim,M.,
Ferlanti,E.S., Belyaeva,I., Rosen,B.D., Micklem,G., Miller,J.R.,
Vaughn,M. and Town,C.D.
TITLE Direct Submission
JOURNAL Submitted (17-MAY-2016) Plant Genomics, J. Craig Venter Institute,
9704 Medical Center Dr, Rockville, MD 20850, USA
REMARK Protein update by submitter
FEATURES Qualifiers
source /organism="Arabidopsis thaliana"
/mol_type="genomic DNA"
/db_xref="taxon:3702"
/chromosome="3"
/ecotype="Columbia"
protein /gene="GRIK1"
/locus_tag="AT3G45240"
/gene_synonym="ATSNAK2"
/gene_synonym="F18N11.1"
/gene_synonym="geminivirus rep interacting kinase 1"
/inference="Similar to RNA sequence,
EST:INSD:EH802509.1,INSD:EL316460.1,INSD:BU635105.1,
INSD:EH809144.1,INSD:ES197325.1,INSD:EH876766.1,
INSD:EL037408.1,INSD:EH852451.1,INSD:EL291568.1,
INSD:ES197003.1,INSD:AV799015.1,INSD:ES098083.1,
INSD:BP567240.1,INSD:EL135608.1,INSD:EL232243.1,
INSD:EL212633.1,INSD:EL291844.1,INSD:ES110917.1,
INSD:BP787890.1,INSD:BP573580.1,INSD:EL021420.1,
INSD:EH881249.1,INSD:EL339817.1,INSD:EL256393.1,
INSD:AV440383.1,INSD:EH806499.1,INSD:ES134072.1,
INSD:EL978001.1"
/inference="Similar to RNA sequence,
mRNA:INSD:AY056309.1,INSD:AM489731.1"
/note="geminivirus rep interacting kinase 1 (GRIK1);
CONTAINS InterPro DOMAIN/s: Calcium/calmodulin-dependent
protein kinase kinase (InterPro:IPR020657), Protein
kinase, ATP binding site (InterPro:IPR017441),
Serine/threonine-protein kinase domain
(InterPro:IPR002290), Serine/threonine-protein kinase-like
domain (InterPro:IPR017442), Protein kinase-like domain
(InterPro:IPR011009), Serine/threonine-protein kinase,
active site (InterPro:IPR008271), Protein kinase,
catalytic domain (InterPro:IPR000719),
Calcium/calmodulin-dependent protein kinase-like
(InterPro:IPR020636); BEST Arabidopsis thaliana protein
match is: geminivirus rep interacting kinase 2
(TAIR:AT5G60550.1); Has 35333 Blast hits to 34131 proteins
in 2444 species: Archae - 798; Bacteria - 22429; Metazoa -
974; Fungi - 991; Plants - 531; Viruses - 0; Other
Eukaryotes - 9610 (source: NCBI BLink)."
/db_xref="TAIR:AT3G45240"
/db_xref="Araport:AT3G45240"
intron_pos 98:0 (1/9)
intron_pos 123:0 (2/9)
intron_pos 138:0 (3/9)
intron_pos 163:0 (4/9)
intron_pos 192:1 (5/9)
intron_pos 234:0 (6/9)
intron_pos 266:0 (7/9)
intron_pos 327:0 (8/9)
intron_pos 353:1 (9/9)
BEGIN
1 MFCDSFAFAQ VMSCFGCFGG SERSRHSPNP YDDDTYSHDS GETSNPGGDD EEGEEEEEVE
61 ELSRSKRSEE ILKCKLQNGL VCRQFPVKET NKLTRGEDED GNKTINEFVR ERKIGSGSYG
121 KVVLYRSTVD DKHYAIKAFH KSHLSRLRVA PSETAMGDVL REVMIMKTLE HPNIVNLIEV
181 IDDPEFDDFY MVLEYVDGKW AYDDSGPPGA LGEITARKYL RDVVAGLMYL HAHNVIHGDI
241 KPDNLLVTST GRVKIGDFSV SQVFKDDDDQ LRRSPGTPVF TAPECCLGIT YSGRSADTWA
301 VGVTLYCMIL GQYPFLGDTL QDTYDKIVHN PLIIPEGLNP RLRDLIEGLL CKDPNQRMTL
361 KAVAEHPWIT GEDGAISEYC CWCKRKAEEE EDQNHS
//