LOCUS AEE78006.1 175 aa PRT PLN 23-MAR-2023
DEFINITION Arabidopsis thaliana hydroxyproline-rich glycoprotein
family protein protein.
ACCESSION CP002686-6097
PROTEIN_ID AEE78006.1
SOURCE Arabidopsis thaliana (thale cress)
ORGANISM Arabidopsis thaliana
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
Pentapetalae; rosids; malvids; Brassicales; Brassicaceae;
Camelineae; Arabidopsis.
REFERENCE 1 (bases 1 to 23459830)
AUTHORS Salanoubat,M., Lemcke,K., Rieger,M., Ansorge,W., Unseld,M.,
Fartmann,B., Valle,G., Blocker,H., Perez-Alonso,M., Obermaier,B.,
Delseny,M., Boutry,M., Grivell,L.A., Mache,R., Puigdomenech,P., De
Simone,V., Choisne,N., Artiguenave,F., Robert,C., Brottier,P.,
Wincker,P., Cattolico,L., Weissenbach,J., Saurin,W., Quetier,F.,
Schafer,M., Muller-Auer,S., Gabel,C., Fuchs,M., Benes,V.,
Wurmbach,E., Drzonek,H., Erfle,H., Jordan,N., Bangert,S.,
Wiedelmann,R., Kranz,H., Voss,H., Holland,R., Brandt,P.,
Nyakatura,G., Vezzi,A., D'Angelo,M., Pallavicini,A., Toppo,S.,
Simionati,B., Conrad,A., Hornischer,K., Kauer,G., Lohnert,T.H.,
Nordsiek,G., Reichelt,J., Scharfe,M., Schon,O., Bargues,M.,
Terol,J., Climent,J., Navarro,P., Collado,C., Perez-Perez,A.,
Ottenwalder,B., Duchemin,D., Cooke,R., Laudie,M., Berger-Llauro,C.,
Purnelle,B., Masuy,D., de Haan,M., Maarse,A.C., Alcaraz,J.P.,
Cottet,A., Casacuberta,E., Monfort,A., Argiriou,A., flores,M.,
Liguori,R., Vitale,D., Mannhaupt,G., Haase,D., Schoof,H., Rudd,S.,
Zaccaria,P., Mewes,H.W., Mayer,K.F., Kaul,S., Town,C.D., Koo,H.L.,
Tallon,L.J., Jenkins,J., Rooney,T., Rizzo,M., Walts,A.,
Utterback,T., Fujii,C.Y., Shea,T.P., Creasy,T.H., Haas,B.,
Maiti,R., Wu,D., Peterson,J., Van Aken,S., Pai,G., Militscher,J.,
Sellers,P., Gill,J.E., Feldblyum,T.V., Preuss,D., Lin,X.,
Nierman,W.C., Salzberg,S.L., White,O., Venter,J.C., Fraser,C.M.,
Kaneko,T., Nakamura,Y., Sato,S., Kato,T., Asamizu,E., Sasamoto,S.,
Kimura,T., Idesawa,K., Kawashima,K., Kishida,Y., Kiyokawa,C.,
Kohara,M., Matsumoto,M., Matsuno,A., Muraki,A., Nakayama,S.,
Nakazaki,N., Shinpo,S., Takeuchi,C., Wada,T., Watanabe,A.,
Yamada,M., Yasuda,M. and Tabata,S.
CONSRTM European Union Chromosome 3 Arabidopsis Sequencing Consortium;
Institute for Genomic Research; Kazusa DNA Research Institute
TITLE Sequence and analysis of chromosome 3 of the plant Arabidopsis
thaliana
JOURNAL Nature 408 (6814), 820-822 (2000)
PUBMED 11130713
REFERENCE 2 (bases 1 to 23459830)
AUTHORS Swarbreck,D., Lamesch,P., Wilks,C. and Huala,E.
CONSRTM TAIR
TITLE Direct Submission
JOURNAL Submitted (18-FEB-2011) Department of Plant Biology, Carnegie
Institution, 260 Panama Street, Stanford, CA, USA
REFERENCE 3 (bases 1 to 23459830)
AUTHORS Krishnakumar,V., Cheng,C.-Y., Chan,A.P., Schobel,S., Kim,M.,
Ferlanti,E.S., Belyaeva,I., Rosen,B.D., Micklem,G., Miller,J.R.,
Vaughn,M. and Town,C.D.
TITLE Direct Submission
JOURNAL Submitted (17-MAY-2016) Plant Genomics, J. Craig Venter Institute,
9704 Medical Center Dr, Rockville, MD 20850, USA
REMARK Protein update by submitter
FEATURES Qualifiers
source /organism="Arabidopsis thaliana"
/mol_type="genomic DNA"
/db_xref="taxon:3702"
/chromosome="3"
/ecotype="Columbia"
protein /locus_tag="AT3G45230"
/gene_synonym="APAP1"
/gene_synonym="ARABINOXYLAN PECTIN ARABINOGALACTAN PROTEIN
1"
/inference="Similar to RNA sequence,
EST:INSD:EL279994.1,INSD:BP866380.1,INSD:AU239474.1,
INSD:BP856711.1,INSD:EH803882.1,INSD:BX838475.1,
INSD:ES112602.1,INSD:ES059388.1,INSD:AU230784.1,
INSD:BP850195.1,INSD:BX838217.1,INSD:EH934076.1,
INSD:EL002689.1,INSD:CB263931.1,INSD:AV557601.1,
INSD:ES083032.1,INSD:ES091658.1,INSD:EH825539.1,
INSD:EL082756.1,INSD:BP854438.1"
/inference="Similar to RNA sequence,
mRNA:INSD:BX825220.1,INSD:BT003707.1,INSD:BX825916.1,
INSD:AK118604.1,INSD:BX826012.1"
/note="hydroxyproline-rich glycoprotein family protein;
BEST Arabidopsis thaliana protein match is: unknown
protein (TAIR:AT5G60630.1); Has 9394 Blast hits to 3408
proteins in 532 species: Archae - 18; Bacteria - 1025;
Metazoa - 764; Fungi - 595; Plants - 1828; Viruses - 505;
Other Eukaryotes - 4659 (source: NCBI BLink)."
/db_xref="TAIR:AT3G45230"
/db_xref="Araport:AT3G45230"
BEGIN
1 MKLEFIIVAM MLSLVLVSGE ILTKSSPAPS PDLADSPLIH ASPPSKLGSH NSPAESPIEY
61 SSPPEPETEH SPSPSPANSP SVSPPLPNDS QSPSSSASPS PSPEASDVNH SDITGIEGEK
121 LPSGSGGGMS GGKKVGVAFG AIAAVCVVGV AGFVYKKRQE NIRRSRYGYA AREIL
//