LOCUS AEE77919.1 111 aa PRT PLN 23-MAR-2023
DEFINITION Arabidopsis thaliana 60S acidic ribosomal protein family protein.
ACCESSION CP002686-5970
PROTEIN_ID AEE77919.1
SOURCE Arabidopsis thaliana (thale cress)
ORGANISM Arabidopsis thaliana
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
Pentapetalae; rosids; malvids; Brassicales; Brassicaceae;
Camelineae; Arabidopsis.
REFERENCE 1 (bases 1 to 23459830)
AUTHORS Salanoubat,M., Lemcke,K., Rieger,M., Ansorge,W., Unseld,M.,
Fartmann,B., Valle,G., Blocker,H., Perez-Alonso,M., Obermaier,B.,
Delseny,M., Boutry,M., Grivell,L.A., Mache,R., Puigdomenech,P., De
Simone,V., Choisne,N., Artiguenave,F., Robert,C., Brottier,P.,
Wincker,P., Cattolico,L., Weissenbach,J., Saurin,W., Quetier,F.,
Schafer,M., Muller-Auer,S., Gabel,C., Fuchs,M., Benes,V.,
Wurmbach,E., Drzonek,H., Erfle,H., Jordan,N., Bangert,S.,
Wiedelmann,R., Kranz,H., Voss,H., Holland,R., Brandt,P.,
Nyakatura,G., Vezzi,A., D'Angelo,M., Pallavicini,A., Toppo,S.,
Simionati,B., Conrad,A., Hornischer,K., Kauer,G., Lohnert,T.H.,
Nordsiek,G., Reichelt,J., Scharfe,M., Schon,O., Bargues,M.,
Terol,J., Climent,J., Navarro,P., Collado,C., Perez-Perez,A.,
Ottenwalder,B., Duchemin,D., Cooke,R., Laudie,M., Berger-Llauro,C.,
Purnelle,B., Masuy,D., de Haan,M., Maarse,A.C., Alcaraz,J.P.,
Cottet,A., Casacuberta,E., Monfort,A., Argiriou,A., flores,M.,
Liguori,R., Vitale,D., Mannhaupt,G., Haase,D., Schoof,H., Rudd,S.,
Zaccaria,P., Mewes,H.W., Mayer,K.F., Kaul,S., Town,C.D., Koo,H.L.,
Tallon,L.J., Jenkins,J., Rooney,T., Rizzo,M., Walts,A.,
Utterback,T., Fujii,C.Y., Shea,T.P., Creasy,T.H., Haas,B.,
Maiti,R., Wu,D., Peterson,J., Van Aken,S., Pai,G., Militscher,J.,
Sellers,P., Gill,J.E., Feldblyum,T.V., Preuss,D., Lin,X.,
Nierman,W.C., Salzberg,S.L., White,O., Venter,J.C., Fraser,C.M.,
Kaneko,T., Nakamura,Y., Sato,S., Kato,T., Asamizu,E., Sasamoto,S.,
Kimura,T., Idesawa,K., Kawashima,K., Kishida,Y., Kiyokawa,C.,
Kohara,M., Matsumoto,M., Matsuno,A., Muraki,A., Nakayama,S.,
Nakazaki,N., Shinpo,S., Takeuchi,C., Wada,T., Watanabe,A.,
Yamada,M., Yasuda,M. and Tabata,S.
CONSRTM European Union Chromosome 3 Arabidopsis Sequencing Consortium;
Institute for Genomic Research; Kazusa DNA Research Institute
TITLE Sequence and analysis of chromosome 3 of the plant Arabidopsis
thaliana
JOURNAL Nature 408 (6814), 820-822 (2000)
PUBMED 11130713
REFERENCE 2 (bases 1 to 23459830)
AUTHORS Swarbreck,D., Lamesch,P., Wilks,C. and Huala,E.
CONSRTM TAIR
TITLE Direct Submission
JOURNAL Submitted (18-FEB-2011) Department of Plant Biology, Carnegie
Institution, 260 Panama Street, Stanford, CA, USA
REFERENCE 3 (bases 1 to 23459830)
AUTHORS Krishnakumar,V., Cheng,C.-Y., Chan,A.P., Schobel,S., Kim,M.,
Ferlanti,E.S., Belyaeva,I., Rosen,B.D., Micklem,G., Miller,J.R.,
Vaughn,M. and Town,C.D.
TITLE Direct Submission
JOURNAL Submitted (17-MAY-2016) Plant Genomics, J. Craig Venter Institute,
9704 Medical Center Dr, Rockville, MD 20850, USA
REMARK Protein update by submitter
FEATURES Qualifiers
source /organism="Arabidopsis thaliana"
/mol_type="genomic DNA"
/db_xref="taxon:3702"
/chromosome="3"
/ecotype="Columbia"
protein /locus_tag="AT3G44590"
/inference="Similar to RNA sequence,
EST:INSD:DR264918.1,INSD:DR264867.1,INSD:EL976051.1,
INSD:DR264848.1,INSD:ES182085.1,INSD:DR264916.1,
INSD:DR264909.1,INSD:DR255270.1,INSD:DR264913.1,
INSD:DR264861.1,INSD:DR264873.1,INSD:DR264836.1,
INSD:BP826251.1,INSD:DR264850.1,INSD:ES156062.1,
INSD:DR264864.1,INSD:DR264904.1,INSD:DR264889.1,
INSD:ES172983.1,INSD:DR264897.1,INSD:DR264905.1,
INSD:DR264844.1,INSD:DR264870.1,INSD:ES122945.1,
INSD:DR264874.1,INSD:DR264899.1,INSD:AV531445.1,
INSD:DR264851.1,INSD:DR264885.1,INSD:BP816407.1,
INSD:BP645154.1,INSD:DR264914.1,INSD:AA720191.1,
INSD:EL081614.1,INSD:DR264847.1,INSD:DR264856.1,
INSD:DR264903.1,INSD:DR264852.1,INSD:DR264915.1,
INSD:EL969277.1,INSD:DR264881.1,INSD:DR264840.1,
INSD:DR264920.1,INSD:ES130687.1,INSD:DR264878.1,
INSD:BP597718.1,INSD:DR264924.1,INSD:DR264891.1,
INSD:DR264858.1,INSD:DR264841.1,INSD:DR264927.1,
INSD:DR264855.1,INSD:DR264894.1,INSD:DR264895.1,
INSD:DR264926.1,INSD:BP623312.1,INSD:EH892294.1,
INSD:DR264866.1,INSD:BP636068.1,INSD:DR264932.1,
INSD:ES216423.1,INSD:DR264875.1,INSD:BP823484.1,
INSD:DR264843.1,INSD:ES187890.1,INSD:DR264910.1,
INSD:AV534715.1,INSD:EL988037.1,INSD:DR264930.1,
INSD:BP651393.1,INSD:DR264933.1,INSD:EL976612.1,
INSD:BP834306.1,INSD:DR264922.1,INSD:DR264854.1,
INSD:DR264934.1,INSD:BP581113.1,INSD:DR264860.1,
INSD:DR264835.1,INSD:DR264898.1,INSD:DR264865.1,
INSD:DR264901.1,INSD:DR264849.1,INSD:DR264872.1,
INSD:BP591741.1,INSD:ES059247.1,INSD:DR264900.1,
INSD:BP653496.1,INSD:ES091036.1,INSD:DR264877.1,
INSD:ES203885.1,INSD:EL982579.1,INSD:DR264925.1,
INSD:DR264834.1,INSD:DR264857.1,INSD:DR264928.1,
INSD:DR264837.1,INSD:DR264911.1,INSD:DR264902.1,
INSD:DR264862.1,INSD:DR264917.1,INSD:DR264879.1,
INSD:DR264919.1,INSD:DR378546.1,INSD:AU227065.1,
INSD:ES157593.1,INSD:DR264908.1,INSD:DR323946.1,
INSD:DR264876.1,INSD:EL968097.1,INSD:DR264832.1,
INSD:DR264884.1,INSD:DR264906.1,INSD:EL969313.1,
INSD:DR264846.1,INSD:BP657614.1,INSD:ES015617.1,
INSD:DR264859.1,INSD:DR323944.1,INSD:DR264833.1,
INSD:DR264842.1,INSD:DR264887.1,INSD:BP592542.1,
INSD:DR264883.1,INSD:DR264931.1,INSD:AV545335.1,
INSD:ES119124.1,INSD:DR264871.1,INSD:ES200520.1,
INSD:EL320952.1,INSD:DR264890.1,INSD:DR264831.1,
INSD:EL290720.1,INSD:DR264907.1,INSD:DR264830.1,
INSD:BP834001.1,INSD:DR264923.1,INSD:DR264845.1,
INSD:DR264868.1,INSD:AU236228.1,INSD:DR264869.1,
INSD:DR264863.1,INSD:DR264886.1,INSD:DR264921.1,
INSD:DR264888.1,INSD:DR264929.1,INSD:DR264880.1,
INSD:BP660313.1,INSD:DR264882.1,INSD:EL968191.1,
INSD:BP635455.1,INSD:BP834963.1,INSD:DR264838.1"
/inference="Similar to RNA sequence,
mRNA:INSD:BT004748.1,INSD:BX825897.1,INSD:AK228350.1,
INSD:BX825312.1"
/note="60S acidic ribosomal protein family; FUNCTIONS IN:
structural constituent of ribosome; INVOLVED IN:
translational elongation; LOCATED IN: cytosol, cytosolic
ribosome, ribosome, nucleus; EXPRESSED IN: 25 plant
structures; EXPRESSED DURING: 15 growth stages; CONTAINS
InterPro DOMAIN/s: Ribosomal protein 60S
(InterPro:IPR001813); BEST Arabidopsis thaliana protein
match is: 60S acidic ribosomal protein family
(TAIR:AT2G27710.4); Has 2091 Blast hits to 2090 proteins
in 382 species: Archae - 63; Bacteria - 0; Metazoa - 803;
Fungi - 479; Plants - 427; Viruses - 0; Other Eukaryotes -
319 (source: NCBI BLink)."
/db_xref="TAIR:AT3G44590"
/db_xref="Araport:AT3G44590"
intron_pos 30:1 (1/2)
intron_pos 104:0 (2/2)
BEGIN
1 MKVAAAFLLA VLGGNANPSA DNIKDIIGAV GADVDGESIE LLLKEVSGKD IAELIASGRE
61 KLASVPSGGG VAVSAAPSSG GGGAAAPAEK KEAKKEEKEE SDDDMGFSLF E
//