LOCUS AEE77862.1 152 aa PRT PLN 23-MAR-2023
DEFINITION Arabidopsis thaliana MD-2-related lipid recognition domain-
containing protein protein.
ACCESSION CP002686-5880
PROTEIN_ID AEE77862.1
SOURCE Arabidopsis thaliana (thale cress)
ORGANISM Arabidopsis thaliana
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
Pentapetalae; rosids; malvids; Brassicales; Brassicaceae;
Camelineae; Arabidopsis.
REFERENCE 1 (bases 1 to 23459830)
AUTHORS Salanoubat,M., Lemcke,K., Rieger,M., Ansorge,W., Unseld,M.,
Fartmann,B., Valle,G., Blocker,H., Perez-Alonso,M., Obermaier,B.,
Delseny,M., Boutry,M., Grivell,L.A., Mache,R., Puigdomenech,P., De
Simone,V., Choisne,N., Artiguenave,F., Robert,C., Brottier,P.,
Wincker,P., Cattolico,L., Weissenbach,J., Saurin,W., Quetier,F.,
Schafer,M., Muller-Auer,S., Gabel,C., Fuchs,M., Benes,V.,
Wurmbach,E., Drzonek,H., Erfle,H., Jordan,N., Bangert,S.,
Wiedelmann,R., Kranz,H., Voss,H., Holland,R., Brandt,P.,
Nyakatura,G., Vezzi,A., D'Angelo,M., Pallavicini,A., Toppo,S.,
Simionati,B., Conrad,A., Hornischer,K., Kauer,G., Lohnert,T.H.,
Nordsiek,G., Reichelt,J., Scharfe,M., Schon,O., Bargues,M.,
Terol,J., Climent,J., Navarro,P., Collado,C., Perez-Perez,A.,
Ottenwalder,B., Duchemin,D., Cooke,R., Laudie,M., Berger-Llauro,C.,
Purnelle,B., Masuy,D., de Haan,M., Maarse,A.C., Alcaraz,J.P.,
Cottet,A., Casacuberta,E., Monfort,A., Argiriou,A., flores,M.,
Liguori,R., Vitale,D., Mannhaupt,G., Haase,D., Schoof,H., Rudd,S.,
Zaccaria,P., Mewes,H.W., Mayer,K.F., Kaul,S., Town,C.D., Koo,H.L.,
Tallon,L.J., Jenkins,J., Rooney,T., Rizzo,M., Walts,A.,
Utterback,T., Fujii,C.Y., Shea,T.P., Creasy,T.H., Haas,B.,
Maiti,R., Wu,D., Peterson,J., Van Aken,S., Pai,G., Militscher,J.,
Sellers,P., Gill,J.E., Feldblyum,T.V., Preuss,D., Lin,X.,
Nierman,W.C., Salzberg,S.L., White,O., Venter,J.C., Fraser,C.M.,
Kaneko,T., Nakamura,Y., Sato,S., Kato,T., Asamizu,E., Sasamoto,S.,
Kimura,T., Idesawa,K., Kawashima,K., Kishida,Y., Kiyokawa,C.,
Kohara,M., Matsumoto,M., Matsuno,A., Muraki,A., Nakayama,S.,
Nakazaki,N., Shinpo,S., Takeuchi,C., Wada,T., Watanabe,A.,
Yamada,M., Yasuda,M. and Tabata,S.
CONSRTM European Union Chromosome 3 Arabidopsis Sequencing Consortium;
Institute for Genomic Research; Kazusa DNA Research Institute
TITLE Sequence and analysis of chromosome 3 of the plant Arabidopsis
thaliana
JOURNAL Nature 408 (6814), 820-822 (2000)
PUBMED 11130713
REFERENCE 2 (bases 1 to 23459830)
AUTHORS Swarbreck,D., Lamesch,P., Wilks,C. and Huala,E.
CONSRTM TAIR
TITLE Direct Submission
JOURNAL Submitted (18-FEB-2011) Department of Plant Biology, Carnegie
Institution, 260 Panama Street, Stanford, CA, USA
REFERENCE 3 (bases 1 to 23459830)
AUTHORS Krishnakumar,V., Cheng,C.-Y., Chan,A.P., Schobel,S., Kim,M.,
Ferlanti,E.S., Belyaeva,I., Rosen,B.D., Micklem,G., Miller,J.R.,
Vaughn,M. and Town,C.D.
TITLE Direct Submission
JOURNAL Submitted (17-MAY-2016) Plant Genomics, J. Craig Venter Institute,
9704 Medical Center Dr, Rockville, MD 20850, USA
REMARK Protein update by submitter
FEATURES Qualifiers
source /organism="Arabidopsis thaliana"
/mol_type="genomic DNA"
/db_xref="taxon:3702"
/chromosome="3"
/ecotype="Columbia"
protein /locus_tag="AT3G44100"
/inference="Similar to RNA sequence,
EST:INSD:DR210891.1,INSD:DR210870.1,INSD:DR210880.1,
INSD:DR210885.1,INSD:DR373593.1,INSD:BP594790.1,
INSD:EH951572.1,INSD:DR210894.1,INSD:EG478810.1,
INSD:DR210871.1,INSD:ES072064.1,INSD:DR210898.1,
INSD:DR210896.1,INSD:DR210879.1,INSD:DR371793.1,
INSD:DR210890.1,INSD:DR210873.1,INSD:DR210884.1,
INSD:DR210892.1,INSD:ES090089.1,INSD:EL177212.1,
INSD:DR210881.1,INSD:DR378165.1,INSD:DR210895.1,
INSD:AU226254.1,INSD:DR210893.1,INSD:ES214663.1,
INSD:DR210876.1,INSD:EG478809.1,INSD:ES053128.1,
INSD:DR210883.1,INSD:ES034446.1,INSD:EL264943.1,
INSD:EL984797.1,INSD:DR210887.1,INSD:ES107983.1,
INSD:EH909523.1,INSD:DR210882.1,INSD:EL332171.1,
INSD:ES129689.1,INSD:EL334684.1,INSD:DR370868.1,
INSD:DR211062.1,INSD:DR210874.1,INSD:DR210886.1,
INSD:EL111622.1,INSD:DR210877.1,INSD:DR210872.1,
INSD:DR211061.1,INSD:DR210888.1,INSD:AI999507.1,
INSD:DR210878.1,INSD:DR210875.1,INSD:DR210897.1,
INSD:AU235533.1,INSD:EL332356.1,INSD:EH840547.1,
INSD:DR210889.1,INSD:EL151830.1,INSD:ES081633.1,
INSD:BP815806.1"
/inference="Similar to RNA sequence,
mRNA:INSD:AY088320.1,INSD:BX825925.1,INSD:AK227594.1,
INSD:BT003058.1,INSD:BX825947.1,INSD:BX826205.1,
INSD:BX826107.1"
/note="MD-2-related lipid recognition domain-containing
protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN: cell
wall, vacuole, anchored to membrane; EXPRESSED IN: 22
plant structures; EXPRESSED DURING: 14 growth stages;
CONTAINS InterPro DOMAIN/s: MD-2-related lipid-recognition
(InterPro:IPR003172); BEST Arabidopsis thaliana protein
match is: MD-2-related lipid recognition domain-containing
protein / ML domain-containing protein (TAIR:AT3G11780.1);
Has 286 Blast hits to 286 proteins in 95 species: Archae -
0; Bacteria - 0; Metazoa - 0; Fungi - 123; Plants - 124;
Viruses - 0; Other Eukaryotes - 39 (source: NCBI BLink)."
/db_xref="TAIR:AT3G44100"
/db_xref="Araport:AT3G44100"
intron_pos 31:1 (1/3)
intron_pos 64:1 (2/3)
intron_pos 118:0 (3/3)
BEGIN
1 MAISQAQPLL LLLLSVFFLP ALHATSFTYC DKRLDPVKVT GVKISPDPVV SGAAATFKIF
61 GSTGEDISGG KVVIRVLYVG IPVHTETHDL CDETACPVAP GSFVLSHSQT LPSITPPGTY
121 TLKMTINDKN GGRLTCISFK FKITVGSAVF AS
//