LOCUS AEE77845.1 502 aa PRT PLN 23-MAR-2023
DEFINITION Arabidopsis thaliana BRCT domain-containing DNA repair
protein protein.
ACCESSION CP002686-5860
PROTEIN_ID AEE77845.1
SOURCE Arabidopsis thaliana (thale cress)
ORGANISM Arabidopsis thaliana
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
Pentapetalae; rosids; malvids; Brassicales; Brassicaceae;
Camelineae; Arabidopsis.
REFERENCE 1 (bases 1 to 23459830)
AUTHORS Salanoubat,M., Lemcke,K., Rieger,M., Ansorge,W., Unseld,M.,
Fartmann,B., Valle,G., Blocker,H., Perez-Alonso,M., Obermaier,B.,
Delseny,M., Boutry,M., Grivell,L.A., Mache,R., Puigdomenech,P., De
Simone,V., Choisne,N., Artiguenave,F., Robert,C., Brottier,P.,
Wincker,P., Cattolico,L., Weissenbach,J., Saurin,W., Quetier,F.,
Schafer,M., Muller-Auer,S., Gabel,C., Fuchs,M., Benes,V.,
Wurmbach,E., Drzonek,H., Erfle,H., Jordan,N., Bangert,S.,
Wiedelmann,R., Kranz,H., Voss,H., Holland,R., Brandt,P.,
Nyakatura,G., Vezzi,A., D'Angelo,M., Pallavicini,A., Toppo,S.,
Simionati,B., Conrad,A., Hornischer,K., Kauer,G., Lohnert,T.H.,
Nordsiek,G., Reichelt,J., Scharfe,M., Schon,O., Bargues,M.,
Terol,J., Climent,J., Navarro,P., Collado,C., Perez-Perez,A.,
Ottenwalder,B., Duchemin,D., Cooke,R., Laudie,M., Berger-Llauro,C.,
Purnelle,B., Masuy,D., de Haan,M., Maarse,A.C., Alcaraz,J.P.,
Cottet,A., Casacuberta,E., Monfort,A., Argiriou,A., flores,M.,
Liguori,R., Vitale,D., Mannhaupt,G., Haase,D., Schoof,H., Rudd,S.,
Zaccaria,P., Mewes,H.W., Mayer,K.F., Kaul,S., Town,C.D., Koo,H.L.,
Tallon,L.J., Jenkins,J., Rooney,T., Rizzo,M., Walts,A.,
Utterback,T., Fujii,C.Y., Shea,T.P., Creasy,T.H., Haas,B.,
Maiti,R., Wu,D., Peterson,J., Van Aken,S., Pai,G., Militscher,J.,
Sellers,P., Gill,J.E., Feldblyum,T.V., Preuss,D., Lin,X.,
Nierman,W.C., Salzberg,S.L., White,O., Venter,J.C., Fraser,C.M.,
Kaneko,T., Nakamura,Y., Sato,S., Kato,T., Asamizu,E., Sasamoto,S.,
Kimura,T., Idesawa,K., Kawashima,K., Kishida,Y., Kiyokawa,C.,
Kohara,M., Matsumoto,M., Matsuno,A., Muraki,A., Nakayama,S.,
Nakazaki,N., Shinpo,S., Takeuchi,C., Wada,T., Watanabe,A.,
Yamada,M., Yasuda,M. and Tabata,S.
CONSRTM European Union Chromosome 3 Arabidopsis Sequencing Consortium;
Institute for Genomic Research; Kazusa DNA Research Institute
TITLE Sequence and analysis of chromosome 3 of the plant Arabidopsis
thaliana
JOURNAL Nature 408 (6814), 820-822 (2000)
PUBMED 11130713
REFERENCE 2 (bases 1 to 23459830)
AUTHORS Swarbreck,D., Lamesch,P., Wilks,C. and Huala,E.
CONSRTM TAIR
TITLE Direct Submission
JOURNAL Submitted (18-FEB-2011) Department of Plant Biology, Carnegie
Institution, 260 Panama Street, Stanford, CA, USA
REFERENCE 3 (bases 1 to 23459830)
AUTHORS Krishnakumar,V., Cheng,C.-Y., Chan,A.P., Schobel,S., Kim,M.,
Ferlanti,E.S., Belyaeva,I., Rosen,B.D., Micklem,G., Miller,J.R.,
Vaughn,M. and Town,C.D.
TITLE Direct Submission
JOURNAL Submitted (17-MAY-2016) Plant Genomics, J. Craig Venter Institute,
9704 Medical Center Dr, Rockville, MD 20850, USA
REMARK Protein update by submitter
FEATURES Qualifiers
source /organism="Arabidopsis thaliana"
/mol_type="genomic DNA"
/db_xref="taxon:3702"
/chromosome="3"
/ecotype="Columbia"
protein /locus_tag="AT3G43930"
/inference="Similar to RNA sequence,
EST:INSD:EG422426.1,INSD:EG422322.1,INSD:EG422305.1,
INSD:EG422277.1,INSD:EG422292.1,INSD:EG422259.1,
INSD:EG422423.1,INSD:EG422287.1,INSD:EG422420.1,
INSD:EG422306.1,INSD:EG422250.1,INSD:EG422284.1,
INSD:EG422265.1,INSD:EG422294.1,INSD:EG422435.1,
INSD:EG422325.1,INSD:EG422215.1,INSD:EG422429.1,
INSD:EG422422.1,INSD:EG422209.1,INSD:EG422290.1,
INSD:EG422260.1,INSD:EG422427.1,INSD:EG422302.1,
INSD:EG422304.1,INSD:EG422425.1,INSD:EG422323.1,
INSD:EG422261.1,INSD:EG422300.1,INSD:EG422262.1"
/note="BRCT domain-containing DNA repair protein;
FUNCTIONS IN: molecular_function unknown; INVOLVED IN:
biological_process unknown; LOCATED IN: intracellular;
EXPRESSED IN: stem; CONTAINS InterPro DOMAIN/s: BRCT
(InterPro:IPR001357); BEST Arabidopsis thaliana protein
match is: unknown protein (TAIR:AT2G26270.1); Has 308
Blast hits to 303 proteins in 95 species: Archae - 0;
Bacteria - 0; Metazoa - 145; Fungi - 87; Plants - 56;
Viruses - 0; Other Eukaryotes - 20 (source: NCBI BLink)."
/db_xref="TAIR:AT3G43930"
/db_xref="Araport:AT3G43930"
intron_pos 70:1 (1/9)
intron_pos 101:0 (2/9)
intron_pos 135:1 (3/9)
intron_pos 204:0 (4/9)
intron_pos 248:0 (5/9)
intron_pos 284:0 (6/9)
intron_pos 314:0 (7/9)
intron_pos 382:2 (8/9)
intron_pos 434:0 (9/9)
BEGIN
1 MEGVRRAEVI DTKRCSKLRV DFTPSLRGSR ISEPFSPATT TTTTSRFHPP VRSDGPFSGL
61 IICVTGLSKE ARKQVKEATE RLGGEYSALL HSLCTHLVVQ NYDGRKFEHA LKHGRRETLY
121 IVTLGWFVDS VCRNVKLSES FYAVKNPEET KVNEDGLKSV YAVEKLHRGG GVQGIEVTGS
181 KDLALSGYSV FIDADISEEV RRQVSQVAVE GGAKLMTQWF IGCNASHVVC EGGSVLRYLG
241 HSSNLVTPLW LQKTLEEKPT QNLVQMSDDL ARDLRTMIEN LGKESPTDRT RPHKERQKIV
301 ESAKKTVTNR HAKMGKTLIQ PLNLSSLLDS ISWTISEPTS TASVIIDSFS NNDDIERKSL
361 SAFFDAKSND SFTHSMRLLT ESERMELVYK NHFITLLLPI DWYGEMGPSS RSYFSETGFT
421 CQQILQNIYA FYQENMSEEE LKAAIHTNSR HSEKLRAADS VMKGGKTVFK RIQFLGSEKG
481 FEMLKRVSSF NCSNVYELII KA
//