LOCUS AEE77844.1 1570 aa PRT PLN 23-MAR-2023
DEFINITION Arabidopsis thaliana dicer-like 3 protein.
ACCESSION CP002686-5855
PROTEIN_ID AEE77844.1
SOURCE Arabidopsis thaliana (thale cress)
ORGANISM Arabidopsis thaliana
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
Pentapetalae; rosids; malvids; Brassicales; Brassicaceae;
Camelineae; Arabidopsis.
REFERENCE 1 (bases 1 to 23459830)
AUTHORS Salanoubat,M., Lemcke,K., Rieger,M., Ansorge,W., Unseld,M.,
Fartmann,B., Valle,G., Blocker,H., Perez-Alonso,M., Obermaier,B.,
Delseny,M., Boutry,M., Grivell,L.A., Mache,R., Puigdomenech,P., De
Simone,V., Choisne,N., Artiguenave,F., Robert,C., Brottier,P.,
Wincker,P., Cattolico,L., Weissenbach,J., Saurin,W., Quetier,F.,
Schafer,M., Muller-Auer,S., Gabel,C., Fuchs,M., Benes,V.,
Wurmbach,E., Drzonek,H., Erfle,H., Jordan,N., Bangert,S.,
Wiedelmann,R., Kranz,H., Voss,H., Holland,R., Brandt,P.,
Nyakatura,G., Vezzi,A., D'Angelo,M., Pallavicini,A., Toppo,S.,
Simionati,B., Conrad,A., Hornischer,K., Kauer,G., Lohnert,T.H.,
Nordsiek,G., Reichelt,J., Scharfe,M., Schon,O., Bargues,M.,
Terol,J., Climent,J., Navarro,P., Collado,C., Perez-Perez,A.,
Ottenwalder,B., Duchemin,D., Cooke,R., Laudie,M., Berger-Llauro,C.,
Purnelle,B., Masuy,D., de Haan,M., Maarse,A.C., Alcaraz,J.P.,
Cottet,A., Casacuberta,E., Monfort,A., Argiriou,A., flores,M.,
Liguori,R., Vitale,D., Mannhaupt,G., Haase,D., Schoof,H., Rudd,S.,
Zaccaria,P., Mewes,H.W., Mayer,K.F., Kaul,S., Town,C.D., Koo,H.L.,
Tallon,L.J., Jenkins,J., Rooney,T., Rizzo,M., Walts,A.,
Utterback,T., Fujii,C.Y., Shea,T.P., Creasy,T.H., Haas,B.,
Maiti,R., Wu,D., Peterson,J., Van Aken,S., Pai,G., Militscher,J.,
Sellers,P., Gill,J.E., Feldblyum,T.V., Preuss,D., Lin,X.,
Nierman,W.C., Salzberg,S.L., White,O., Venter,J.C., Fraser,C.M.,
Kaneko,T., Nakamura,Y., Sato,S., Kato,T., Asamizu,E., Sasamoto,S.,
Kimura,T., Idesawa,K., Kawashima,K., Kishida,Y., Kiyokawa,C.,
Kohara,M., Matsumoto,M., Matsuno,A., Muraki,A., Nakayama,S.,
Nakazaki,N., Shinpo,S., Takeuchi,C., Wada,T., Watanabe,A.,
Yamada,M., Yasuda,M. and Tabata,S.
CONSRTM European Union Chromosome 3 Arabidopsis Sequencing Consortium;
Institute for Genomic Research; Kazusa DNA Research Institute
TITLE Sequence and analysis of chromosome 3 of the plant Arabidopsis
thaliana
JOURNAL Nature 408 (6814), 820-822 (2000)
PUBMED 11130713
REFERENCE 2 (bases 1 to 23459830)
AUTHORS Swarbreck,D., Lamesch,P., Wilks,C. and Huala,E.
CONSRTM TAIR
TITLE Direct Submission
JOURNAL Submitted (18-FEB-2011) Department of Plant Biology, Carnegie
Institution, 260 Panama Street, Stanford, CA, USA
REFERENCE 3 (bases 1 to 23459830)
AUTHORS Krishnakumar,V., Cheng,C.-Y., Chan,A.P., Schobel,S., Kim,M.,
Ferlanti,E.S., Belyaeva,I., Rosen,B.D., Micklem,G., Miller,J.R.,
Vaughn,M. and Town,C.D.
TITLE Direct Submission
JOURNAL Submitted (17-MAY-2016) Plant Genomics, J. Craig Venter Institute,
9704 Medical Center Dr, Rockville, MD 20850, USA
REMARK Protein update by submitter
FEATURES Qualifiers
source /organism="Arabidopsis thaliana"
/mol_type="genomic DNA"
/db_xref="taxon:3702"
/chromosome="3"
/ecotype="Columbia"
protein /gene="DCL3"
/locus_tag="AT3G43920"
/gene_synonym="ATDCL3"
/gene_synonym="dicer-like 3"
/gene_synonym="DICER-LIKE 3"
/note="dicer-like 3 (DCL3); CONTAINS InterPro DOMAIN/s:
DNA/RNA helicase, DEAD/DEAH box type, N-terminal
(InterPro:IPR011545), DEAD-like helicase, N-terminal
(InterPro:IPR014001), Argonaute/Dicer protein, PAZ
(InterPro:IPR003100), DNA/RNA helicase, C-terminal
(InterPro:IPR001650), Helicase, superfamily 1/2,
ATP-binding domain (InterPro:IPR014021), Ribonuclease III
(InterPro:IPR000999); BEST Arabidopsis thaliana protein
match is: dicer-like 1 (TAIR:AT1G01040.1); Has 13599 Blast
hits to 8740 proteins in 2670 species: Archae - 198;
Bacteria - 7991; Metazoa - 1636; Fungi - 703; Plants -
621; Viruses - 45; Other Eukaryotes - 2405 (source: NCBI
BLink)."
/db_xref="TAIR:AT3G43920"
/db_xref="Araport:AT3G43920"
intron_pos 45:2 (1/23)
intron_pos 104:0 (2/23)
intron_pos 142:0 (3/23)
intron_pos 187:0 (4/23)
intron_pos 210:1 (5/23)
intron_pos 223:0 (6/23)
intron_pos 267:0 (7/23)
intron_pos 318:0 (8/23)
intron_pos 361:1 (9/23)
intron_pos 396:2 (10/23)
intron_pos 461:0 (11/23)
intron_pos 514:2 (12/23)
intron_pos 623:1 (13/23)
intron_pos 714:0 (14/23)
intron_pos 887:2 (15/23)
intron_pos 919:1 (16/23)
intron_pos 996:0 (17/23)
intron_pos 1066:0 (18/23)
intron_pos 1222:0 (19/23)
intron_pos 1313:0 (20/23)
intron_pos 1422:0 (21/23)
intron_pos 1466:1 (22/23)
intron_pos 1503:2 (23/23)
BEGIN
1 MHSSLEPEKM EEGGGSNSLK RKFSEIDGDQ NLDSVSSPMM TDSNGSYELK VYEVAKNRNI
61 IAVLGTGIDK SEITKRLIKA MGSSDTDKRL IIFLAPTVNL VKQQCCEIRA LVNLKVEEYF
121 GAKGVDKWTS QRWDEEFSKH DVLVMTPQIL LDVLRSAFLK LEMVCLLIID ECHHTTGNHP
181 YAKLMKEFYH ESTSKPKIFG LTASAVIRKA QVSELERLMD SKIFNPEERE GVEKFATTVK
241 EGPILYNPSP SCSLELKEKL ETSHLKFDAS LRRLQELGKD SFLNMDNKFE TYQKRLSIDY
301 REILHCLDNL GLICAHLAAE VCLEKISDTK EESETYKECS MVCKEFLEDI LSTIGVYLPQ
361 DDKSLVDLQQ NHLSAVISGH VSPKLKELFH LLDSFRGDKQ KQCLILVERI ITAKVIERFV
421 KKEASLAYLN VLYLTENNPS TNVSAQKMQI EIPDLFQHGK VNLLFITDVV EEGFQVPDCS
481 CMVCFDLPKT MCSYSQSQKH AKQSNSKSIM FLERGNPKQR DHLHDLMRRE VLIQDPEAPN
541 LKSCPPPVKN GHGVKEIGSM VIPDSNITVS EEAASTQTMS DPPSRNEQLP PCKKLRLDNN
601 LLQSNGKEKV ASSKSKSSSS AAGSKKRKEL HGTTCANALS GTWGENIDGA TFQAYKFDFC
661 CNISGEVYSS FSLLLESTLA EDVGKVEMDL YLVRKLVKAS VSPCGQIRLS QEELVKAKYF
721 QQFFFNGMFG KLFVGSKSQG TKREFLLQTD TSSLWHPAFM FLLLPVETND LASSATIDWS
781 AINSCASIVE FLKKNSLLDL RDSDGNQCNT SSGQEVLLDD KMEETNLIHF ANASSDKNSL
841 EELVVIAIHT GRIYSIVEAV SDSSAMSPFE VDASSGYATY AEYFNKKYGI VLAHPNQPLM
901 KLKQSHHAHN LLVDFNEEMV VKTEPKAGNV RKRKPNIHAH LPPELLARID VPRAVLKSIY
961 LLPSVMHRLE SLMLASQLRE EIDCSIDNFS ISSTSILEAV TTLTCPESFS MERLELLGDS
1021 VLKYVASCHL FLKYPDKDEG QLSRQRQSII SNSNLHRLTT SRKLQGYIRN GAFEPRRWTA
1081 PGQFSLFPVP CKCGIDTREV PLDPKFFTEN MTIKIGKSCD MGHRWVVSKS VSDCAEALIG
1141 AYYVSGGLSA SLHMMKWLGI DVDFDPNLVV EAINRVSLRC YIPKEDELIE LERKIQHEFS
1201 AKFLLKEAIT HSSLRESYSY ERLEFLGDSV LDFLITRHLF NTYEQTGPGE MTDLRSACVN
1261 NENFAQVAVK NNLHTHLQRC ATVLETQIND YLMSFQKPDE TGRSIPSIQG PKALGDVVES
1321 IAGALLIDTR LDLDQVWRVF EPLLSPLVTP DKLQLPPYRE LNELCDSLGY FFRVKCSNDG
1381 VKAQATIQLQ LDDVLLTGDG SEQTNKLALG KAASHLLTQL EKRNISRKTS LGDNQSSMDV
1441 NLACNHSDRE TLTSETTEIQ SIVIPFIGPI NMKKGGPRGT LHEFCKKHLW PMPTFDTSEE
1501 KSRTPFEFID GGEKRTSFSS FTSTITLRIP NREAVMYAGE ARPDKKSSFD SAVVELLYEL
1561 ERRKIVIIQK
//