LOCUS AEE77842.1 1531 aa PRT PLN 23-MAR-2023
DEFINITION Arabidopsis thaliana dicer-like 3 protein.
ACCESSION CP002686-5856
PROTEIN_ID AEE77842.1
SOURCE Arabidopsis thaliana (thale cress)
ORGANISM Arabidopsis thaliana
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
Pentapetalae; rosids; malvids; Brassicales; Brassicaceae;
Camelineae; Arabidopsis.
REFERENCE 1 (bases 1 to 23459830)
AUTHORS Salanoubat,M., Lemcke,K., Rieger,M., Ansorge,W., Unseld,M.,
Fartmann,B., Valle,G., Blocker,H., Perez-Alonso,M., Obermaier,B.,
Delseny,M., Boutry,M., Grivell,L.A., Mache,R., Puigdomenech,P., De
Simone,V., Choisne,N., Artiguenave,F., Robert,C., Brottier,P.,
Wincker,P., Cattolico,L., Weissenbach,J., Saurin,W., Quetier,F.,
Schafer,M., Muller-Auer,S., Gabel,C., Fuchs,M., Benes,V.,
Wurmbach,E., Drzonek,H., Erfle,H., Jordan,N., Bangert,S.,
Wiedelmann,R., Kranz,H., Voss,H., Holland,R., Brandt,P.,
Nyakatura,G., Vezzi,A., D'Angelo,M., Pallavicini,A., Toppo,S.,
Simionati,B., Conrad,A., Hornischer,K., Kauer,G., Lohnert,T.H.,
Nordsiek,G., Reichelt,J., Scharfe,M., Schon,O., Bargues,M.,
Terol,J., Climent,J., Navarro,P., Collado,C., Perez-Perez,A.,
Ottenwalder,B., Duchemin,D., Cooke,R., Laudie,M., Berger-Llauro,C.,
Purnelle,B., Masuy,D., de Haan,M., Maarse,A.C., Alcaraz,J.P.,
Cottet,A., Casacuberta,E., Monfort,A., Argiriou,A., flores,M.,
Liguori,R., Vitale,D., Mannhaupt,G., Haase,D., Schoof,H., Rudd,S.,
Zaccaria,P., Mewes,H.W., Mayer,K.F., Kaul,S., Town,C.D., Koo,H.L.,
Tallon,L.J., Jenkins,J., Rooney,T., Rizzo,M., Walts,A.,
Utterback,T., Fujii,C.Y., Shea,T.P., Creasy,T.H., Haas,B.,
Maiti,R., Wu,D., Peterson,J., Van Aken,S., Pai,G., Militscher,J.,
Sellers,P., Gill,J.E., Feldblyum,T.V., Preuss,D., Lin,X.,
Nierman,W.C., Salzberg,S.L., White,O., Venter,J.C., Fraser,C.M.,
Kaneko,T., Nakamura,Y., Sato,S., Kato,T., Asamizu,E., Sasamoto,S.,
Kimura,T., Idesawa,K., Kawashima,K., Kishida,Y., Kiyokawa,C.,
Kohara,M., Matsumoto,M., Matsuno,A., Muraki,A., Nakayama,S.,
Nakazaki,N., Shinpo,S., Takeuchi,C., Wada,T., Watanabe,A.,
Yamada,M., Yasuda,M. and Tabata,S.
CONSRTM European Union Chromosome 3 Arabidopsis Sequencing Consortium;
Institute for Genomic Research; Kazusa DNA Research Institute
TITLE Sequence and analysis of chromosome 3 of the plant Arabidopsis
thaliana
JOURNAL Nature 408 (6814), 820-822 (2000)
PUBMED 11130713
REFERENCE 2 (bases 1 to 23459830)
AUTHORS Swarbreck,D., Lamesch,P., Wilks,C. and Huala,E.
CONSRTM TAIR
TITLE Direct Submission
JOURNAL Submitted (18-FEB-2011) Department of Plant Biology, Carnegie
Institution, 260 Panama Street, Stanford, CA, USA
REFERENCE 3 (bases 1 to 23459830)
AUTHORS Krishnakumar,V., Cheng,C.-Y., Chan,A.P., Schobel,S., Kim,M.,
Ferlanti,E.S., Belyaeva,I., Rosen,B.D., Micklem,G., Miller,J.R.,
Vaughn,M. and Town,C.D.
TITLE Direct Submission
JOURNAL Submitted (17-MAY-2016) Plant Genomics, J. Craig Venter Institute,
9704 Medical Center Dr, Rockville, MD 20850, USA
REMARK Protein update by submitter
FEATURES Qualifiers
source /organism="Arabidopsis thaliana"
/mol_type="genomic DNA"
/db_xref="taxon:3702"
/chromosome="3"
/ecotype="Columbia"
protein /gene="DCL3"
/locus_tag="AT3G43920"
/gene_synonym="ATDCL3"
/gene_synonym="dicer-like 3"
/gene_synonym="DICER-LIKE 3"
/inference="Similar to RNA sequence,
EST:INSD:EG422302.1,INSD:EG422290.1,INSD:EG422304.1,
INSD:EG422298.1,INSD:ES088132.1,INSD:EG422292.1,
INSD:EG422300.1"
/inference="Similar to RNA sequence, mRNA:INSD:DQ479972.1"
/note="dicer-like 3 (DCL3); CONTAINS InterPro DOMAIN/s:
DNA/RNA helicase, DEAD/DEAH box type, N-terminal
(InterPro:IPR011545), DEAD-like helicase, N-terminal
(InterPro:IPR014001), Argonaute/Dicer protein, PAZ
(InterPro:IPR003100), DNA/RNA helicase, C-terminal
(InterPro:IPR001650), Helicase, superfamily 1/2,
ATP-binding domain (InterPro:IPR014021), Ribonuclease III
(InterPro:IPR000999); BEST Arabidopsis thaliana protein
match is: dicer-like 4 (TAIR:AT5G20320.1); Has 13386 Blast
hits to 8472 proteins in 2623 species: Archae - 174;
Bacteria - 7922; Metazoa - 1543; Fungi - 728; Plants -
598; Viruses - 37; Other Eukaryotes - 2384 (source: NCBI
BLink)."
/db_xref="TAIR:AT3G43920"
/db_xref="Araport:AT3G43920"
intron_pos 45:2 (1/21)
intron_pos 101:0 (2/21)
intron_pos 139:0 (3/21)
intron_pos 184:0 (4/21)
intron_pos 228:0 (5/21)
intron_pos 279:0 (6/21)
intron_pos 322:1 (7/21)
intron_pos 357:2 (8/21)
intron_pos 422:0 (9/21)
intron_pos 475:2 (10/21)
intron_pos 584:1 (11/21)
intron_pos 675:0 (12/21)
intron_pos 848:2 (13/21)
intron_pos 880:1 (14/21)
intron_pos 957:0 (15/21)
intron_pos 1027:0 (16/21)
intron_pos 1183:0 (17/21)
intron_pos 1274:0 (18/21)
intron_pos 1383:0 (19/21)
intron_pos 1427:1 (20/21)
intron_pos 1464:2 (21/21)
BEGIN
1 MHSSLEPEKM EEGGGSNSLK RKFSEIDGDQ NLDSVSSPMM TDSNGSYELK VYEVAKNRNI
61 IAVLGTGIDK SEITKRLIKA MGSSDTDKRL IIFLAPTVNL QCCEIRALVN LKVEEYFGAK
121 GVDKWTSQRW DEEFSKHDVL VMTPQILLDV LRSAFLKLEM VCLLIIDECH HTTGNHPYAK
181 LMKIFNPEER EGVEKFATTV KEGPILYNPS PSCSLELKEK LETSHLKFDA SLRRLQELGK
241 DSFLNMDNKF ETYQKRLSID YREILHCLDN LGLICAHLAA EVCLEKISDT KEESETYKEC
301 SMVCKEFLED ILSTIGVYLP QDDKSLVDLQ QNHLSAVISG HVSPKLKELF HLLDSFRGDK
361 QKQCLILVER IITAKVIERF VKKEASLAYL NVLYLTENNP STNVSAQKMQ IEIPDLFQHG
421 KVNLLFITDV VEEGFQVPDC SCMVCFDLPK TMCSYSQSQK HAKQSNSKSI MFLERGNPKQ
481 RDHLHDLMRR EVLIQDPEAP NLKSCPPPVK NGHGVKEIGS MVIPDSNITV SEEAASTQTM
541 SDPPSRNEQL PPCKKLRLDN NLLQSNGKEK VASSKSKSSS SAAGSKKRKE LHGTTCANAL
601 SGTWGENIDG ATFQAYKFDF CCNISGEVYS SFSLLLESTL AEDVGKVEMD LYLVRKLVKA
661 SVSPCGQIRL SQEELVKAKY FQQFFFNGMF GKLFVGSKSQ GTKREFLLQT DTSSLWHPAF
721 MFLLLPVETN DLASSATIDW SAINSCASIV EFLKKNSLLD LRDSDGNQCN TSSGQEVLLD
781 DKMEETNLIH FANASSDKNS LEELVVIAIH TGRIYSIVEA VSDSSAMSPF EVDASSGYAT
841 YAEYFNKKYG IVLAHPNQPL MKLKQSHHAH NLLVDFNEEM VVKTEPKAGN VRKRKPNIHA
901 HLPPELLARI DVPRAVLKSI YLLPSVMHRL ESLMLASQLR EEIDCSIDNF SISSTSILEA
961 VTTLTCPESF SMERLELLGD SVLKYVASCH LFLKYPDKDE GQLSRQRQSI ISNSNLHRLT
1021 TSRKLQGYIR NGAFEPRRWT APGQFSLFPV PCKCGIDTRE VPLDPKFFTE NMTIKIGKSC
1081 DMGHRWVVSK SVSDCAEALI GAYYVSGGLS ASLHMMKWLG IDVDFDPNLV VEAINRVSLR
1141 CYIPKEDELI ELERKIQHEF SAKFLLKEAI THSSLRESYS YERLEFLGDS VLDFLITRHL
1201 FNTYEQTGPG EMTDLRSACV NNENFAQVAV KNNLHTHLQR CATVLETQIN DYLMSFQKPD
1261 ETGRSIPSIQ GPKALGDVVE SIAGALLIDT RLDLDQVWRV FEPLLSPLVT PDKLQLPPYR
1321 ELNELCDSLG YFFRVKCSND GVKAQATIQL QLDDVLLTGD GSEQTNKLAL GKAASHLLTQ
1381 LEKRNISRKT SLGDNQSSMD VNLACNHSDR ETLTSETTEI QSIVIPFIGP INMKKGGPRG
1441 TLHEFCKKHL WPMPTFDTSE EKSRTPFEFI DGGEKRTSFS SFTSTITLRI PNREAVMYAG
1501 EARPDKKSSF DSAVVELLYE LERRKIVIIQ K
//