LOCUS AEE77836.1 486 aa PRT PLN 23-MAR-2023
DEFINITION Arabidopsis thaliana glycosyl hydrolase 9A4 protein.
ACCESSION CP002686-5849
PROTEIN_ID AEE77836.1
SOURCE Arabidopsis thaliana (thale cress)
ORGANISM Arabidopsis thaliana
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
Pentapetalae; rosids; malvids; Brassicales; Brassicaceae;
Camelineae; Arabidopsis.
REFERENCE 1 (bases 1 to 23459830)
AUTHORS Salanoubat,M., Lemcke,K., Rieger,M., Ansorge,W., Unseld,M.,
Fartmann,B., Valle,G., Blocker,H., Perez-Alonso,M., Obermaier,B.,
Delseny,M., Boutry,M., Grivell,L.A., Mache,R., Puigdomenech,P., De
Simone,V., Choisne,N., Artiguenave,F., Robert,C., Brottier,P.,
Wincker,P., Cattolico,L., Weissenbach,J., Saurin,W., Quetier,F.,
Schafer,M., Muller-Auer,S., Gabel,C., Fuchs,M., Benes,V.,
Wurmbach,E., Drzonek,H., Erfle,H., Jordan,N., Bangert,S.,
Wiedelmann,R., Kranz,H., Voss,H., Holland,R., Brandt,P.,
Nyakatura,G., Vezzi,A., D'Angelo,M., Pallavicini,A., Toppo,S.,
Simionati,B., Conrad,A., Hornischer,K., Kauer,G., Lohnert,T.H.,
Nordsiek,G., Reichelt,J., Scharfe,M., Schon,O., Bargues,M.,
Terol,J., Climent,J., Navarro,P., Collado,C., Perez-Perez,A.,
Ottenwalder,B., Duchemin,D., Cooke,R., Laudie,M., Berger-Llauro,C.,
Purnelle,B., Masuy,D., de Haan,M., Maarse,A.C., Alcaraz,J.P.,
Cottet,A., Casacuberta,E., Monfort,A., Argiriou,A., flores,M.,
Liguori,R., Vitale,D., Mannhaupt,G., Haase,D., Schoof,H., Rudd,S.,
Zaccaria,P., Mewes,H.W., Mayer,K.F., Kaul,S., Town,C.D., Koo,H.L.,
Tallon,L.J., Jenkins,J., Rooney,T., Rizzo,M., Walts,A.,
Utterback,T., Fujii,C.Y., Shea,T.P., Creasy,T.H., Haas,B.,
Maiti,R., Wu,D., Peterson,J., Van Aken,S., Pai,G., Militscher,J.,
Sellers,P., Gill,J.E., Feldblyum,T.V., Preuss,D., Lin,X.,
Nierman,W.C., Salzberg,S.L., White,O., Venter,J.C., Fraser,C.M.,
Kaneko,T., Nakamura,Y., Sato,S., Kato,T., Asamizu,E., Sasamoto,S.,
Kimura,T., Idesawa,K., Kawashima,K., Kishida,Y., Kiyokawa,C.,
Kohara,M., Matsumoto,M., Matsuno,A., Muraki,A., Nakayama,S.,
Nakazaki,N., Shinpo,S., Takeuchi,C., Wada,T., Watanabe,A.,
Yamada,M., Yasuda,M. and Tabata,S.
CONSRTM European Union Chromosome 3 Arabidopsis Sequencing Consortium;
Institute for Genomic Research; Kazusa DNA Research Institute
TITLE Sequence and analysis of chromosome 3 of the plant Arabidopsis
thaliana
JOURNAL Nature 408 (6814), 820-822 (2000)
PUBMED 11130713
REFERENCE 2 (bases 1 to 23459830)
AUTHORS Swarbreck,D., Lamesch,P., Wilks,C. and Huala,E.
CONSRTM TAIR
TITLE Direct Submission
JOURNAL Submitted (18-FEB-2011) Department of Plant Biology, Carnegie
Institution, 260 Panama Street, Stanford, CA, USA
REFERENCE 3 (bases 1 to 23459830)
AUTHORS Krishnakumar,V., Cheng,C.-Y., Chan,A.P., Schobel,S., Kim,M.,
Ferlanti,E.S., Belyaeva,I., Rosen,B.D., Micklem,G., Miller,J.R.,
Vaughn,M. and Town,C.D.
TITLE Direct Submission
JOURNAL Submitted (17-MAY-2016) Plant Genomics, J. Craig Venter Institute,
9704 Medical Center Dr, Rockville, MD 20850, USA
REMARK Protein update by submitter
FEATURES Qualifiers
source /organism="Arabidopsis thaliana"
/mol_type="genomic DNA"
/db_xref="taxon:3702"
/chromosome="3"
/ecotype="Columbia"
protein /gene="GH9A4"
/locus_tag="AT3G43860"
/gene_synonym="AtGH9A4"
/gene_synonym="glycosyl hydrolase 9A4"
/inference="Similar to RNA sequence,
EST:INSD:AV808670.1,INSD:BP834441.2,INSD:BP660271.1,
INSD:BP820624.1,INSD:AU239335.1,INSD:BP837120.2,
INSD:BP814540.2,INSD:AU230631.1,INSD:BP658380.1,
INSD:AV829794.1,INSD:BP639144.1"
/inference="Similar to RNA sequence,
mRNA:INSD:AY072099.1,INSD:AK229645.1"
/note="glycosyl hydrolase 9A4 (GH9A4); FUNCTIONS IN:
hydrolase activity, hydrolyzing O-glycosyl compounds,
catalytic activity; INVOLVED IN: carbohydrate metabolic
process; LOCATED IN: endomembrane system; EXPRESSED IN: 9
plant structures; EXPRESSED DURING: L mature pollen stage,
M germinated pollen stage, 4 anthesis, C globular stage,
petal differentiation and expansion stage; CONTAINS
InterPro DOMAIN/s: Six-hairpin glycosidase
(InterPro:IPR012341), Six-hairpin glycosidase-like
(InterPro:IPR008928), Glycoside hydrolase, family 9
(InterPro:IPR001701); BEST Arabidopsis thaliana protein
match is: glycosyl hydrolase 9B13 (TAIR:AT4G02290.1); Has
1796 Blast hits to 1785 proteins in 262 species: Archae -
2; Bacteria - 633; Metazoa - 188; Fungi - 19; Plants -
915; Viruses - 0; Other Eukaryotes - 39 (source: NCBI
BLink)."
/db_xref="TAIR:AT3G43860"
/db_xref="Araport:AT3G43860"
intron_pos 76:0 (1/7)
intron_pos 147:0 (2/7)
intron_pos 214:0 (3/7)
intron_pos 240:0 (4/7)
intron_pos 290:0 (5/7)
intron_pos 326:1 (6/7)
intron_pos 381:0 (7/7)
BEGIN
1 MANYKGRGNV MIRSMLLGLY GIINIVCVNG TFINYKDALT KSLIFLEAQR SGKLPPNNRV
61 PWRGDSALDD GKLVNVDLSG GYYDAGDNVK YGLPMAFTIT TLAWSTITYE KELRATGELE
121 NARAAIRWGT DYFLKCASRK NRLYVQVGDP NADHQCWARP ENMKTPRTVL EISDKVPGTE
181 IAAEAAAAFA ASSIVFRHVD HKYARRLLNK AKLLFKLAKS HKGTYDGECP FYCSNSGYND
241 ELIWAATWLY KATRNHLYLS YLKFEAISAY VAEFSWDLKY AGAQILITKL IFEGHKGLDL
301 YKQQADSFVC SNLPGSPYHQ VFTTPGGMIH LRDGANSQYV TATAFLFSAY ADILQKHNQK
361 ISCGSHQFDS THLMAFAKKQ IDYILGHNPQ GRSYMVGFGP NPPKQAHHRG ASVPMHEANA
421 PLSCPLSFVK WYNKNVPNAN ELTGAILGGP DRQDKFQDLR WTSVYTEPCT YINSIAVGVL
481 AKLAAA
//