LOCUS AEE77804.1 301 aa PRT PLN 23-MAR-2023
DEFINITION Arabidopsis thaliana initiation factor 4F subunit (DUF1350)
protein.
ACCESSION CP002686-5806
PROTEIN_ID AEE77804.1
SOURCE Arabidopsis thaliana (thale cress)
ORGANISM Arabidopsis thaliana
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
Pentapetalae; rosids; malvids; Brassicales; Brassicaceae;
Camelineae; Arabidopsis.
REFERENCE 1 (bases 1 to 23459830)
AUTHORS Salanoubat,M., Lemcke,K., Rieger,M., Ansorge,W., Unseld,M.,
Fartmann,B., Valle,G., Blocker,H., Perez-Alonso,M., Obermaier,B.,
Delseny,M., Boutry,M., Grivell,L.A., Mache,R., Puigdomenech,P., De
Simone,V., Choisne,N., Artiguenave,F., Robert,C., Brottier,P.,
Wincker,P., Cattolico,L., Weissenbach,J., Saurin,W., Quetier,F.,
Schafer,M., Muller-Auer,S., Gabel,C., Fuchs,M., Benes,V.,
Wurmbach,E., Drzonek,H., Erfle,H., Jordan,N., Bangert,S.,
Wiedelmann,R., Kranz,H., Voss,H., Holland,R., Brandt,P.,
Nyakatura,G., Vezzi,A., D'Angelo,M., Pallavicini,A., Toppo,S.,
Simionati,B., Conrad,A., Hornischer,K., Kauer,G., Lohnert,T.H.,
Nordsiek,G., Reichelt,J., Scharfe,M., Schon,O., Bargues,M.,
Terol,J., Climent,J., Navarro,P., Collado,C., Perez-Perez,A.,
Ottenwalder,B., Duchemin,D., Cooke,R., Laudie,M., Berger-Llauro,C.,
Purnelle,B., Masuy,D., de Haan,M., Maarse,A.C., Alcaraz,J.P.,
Cottet,A., Casacuberta,E., Monfort,A., Argiriou,A., flores,M.,
Liguori,R., Vitale,D., Mannhaupt,G., Haase,D., Schoof,H., Rudd,S.,
Zaccaria,P., Mewes,H.W., Mayer,K.F., Kaul,S., Town,C.D., Koo,H.L.,
Tallon,L.J., Jenkins,J., Rooney,T., Rizzo,M., Walts,A.,
Utterback,T., Fujii,C.Y., Shea,T.P., Creasy,T.H., Haas,B.,
Maiti,R., Wu,D., Peterson,J., Van Aken,S., Pai,G., Militscher,J.,
Sellers,P., Gill,J.E., Feldblyum,T.V., Preuss,D., Lin,X.,
Nierman,W.C., Salzberg,S.L., White,O., Venter,J.C., Fraser,C.M.,
Kaneko,T., Nakamura,Y., Sato,S., Kato,T., Asamizu,E., Sasamoto,S.,
Kimura,T., Idesawa,K., Kawashima,K., Kishida,Y., Kiyokawa,C.,
Kohara,M., Matsumoto,M., Matsuno,A., Muraki,A., Nakayama,S.,
Nakazaki,N., Shinpo,S., Takeuchi,C., Wada,T., Watanabe,A.,
Yamada,M., Yasuda,M. and Tabata,S.
CONSRTM European Union Chromosome 3 Arabidopsis Sequencing Consortium;
Institute for Genomic Research; Kazusa DNA Research Institute
TITLE Sequence and analysis of chromosome 3 of the plant Arabidopsis
thaliana
JOURNAL Nature 408 (6814), 820-822 (2000)
PUBMED 11130713
REFERENCE 2 (bases 1 to 23459830)
AUTHORS Swarbreck,D., Lamesch,P., Wilks,C. and Huala,E.
CONSRTM TAIR
TITLE Direct Submission
JOURNAL Submitted (18-FEB-2011) Department of Plant Biology, Carnegie
Institution, 260 Panama Street, Stanford, CA, USA
REFERENCE 3 (bases 1 to 23459830)
AUTHORS Krishnakumar,V., Cheng,C.-Y., Chan,A.P., Schobel,S., Kim,M.,
Ferlanti,E.S., Belyaeva,I., Rosen,B.D., Micklem,G., Miller,J.R.,
Vaughn,M. and Town,C.D.
TITLE Direct Submission
JOURNAL Submitted (17-MAY-2016) Plant Genomics, J. Craig Venter Institute,
9704 Medical Center Dr, Rockville, MD 20850, USA
REMARK Protein update by submitter
FEATURES Qualifiers
source /organism="Arabidopsis thaliana"
/mol_type="genomic DNA"
/db_xref="taxon:3702"
/chromosome="3"
/ecotype="Columbia"
protein /locus_tag="AT3G43540"
/inference="Similar to RNA sequence,
EST:INSD:EL104786.1,INSD:EH809023.1,INSD:EL125839.1,
INSD:AA067505.1,INSD:AV548344.1,INSD:EL334788.1,
INSD:EL046172.1,INSD:EL065866.1,INSD:BP667196.1,
INSD:EH916536.1,INSD:EL281968.1,INSD:EH829981.1,
INSD:EL222885.1,INSD:CF774005.1,INSD:EH919588.1,
INSD:ES082040.1,INSD:EL074752.1"
/inference="Similar to RNA sequence, mRNA:INSD:BX823559.1"
/note="Protein of unknown function (DUF1350); FUNCTIONS
IN: molecular_function unknown; INVOLVED IN:
biological_process unknown; LOCATED IN: chloroplast;
EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13
growth stages; CONTAINS InterPro DOMAIN/s: Protein of
unknown function DUF1350 (InterPro:IPR010765); BEST
Arabidopsis thaliana protein match is: Protein of unknown
function (DUF1350) (TAIR:AT5G47860.1); Has 35333 Blast
hits to 34131 proteins in 2444 species: Archae - 798;
Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants -
531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI
BLink)."
/db_xref="TAIR:AT3G43540"
/db_xref="Araport:AT3G43540"
intron_pos 79:2 (1/7)
intron_pos 99:0 (2/7)
intron_pos 120:0 (3/7)
intron_pos 145:1 (4/7)
intron_pos 184:0 (5/7)
intron_pos 214:0 (6/7)
intron_pos 258:0 (7/7)
BEGIN
1 MLFLCLCVIC SYLKELLAKE GYLIVSVPYN VTFDHEQAAK QVYERFNSCL DTIVSSGIPN
61 SNLKPGDLAD LPLFSVGHSN GALLQVLTGS YFAEKIPKVN AIISFNNKSA TEAVPYFEQL
121 GPLIQQMLPM VEASPVYEMA RNASGDVLKL LLDTAGTTIL NNDQEALKSF TKLVDQLPSV
181 FGEVGQGVSE FRPSPLENRN CFKCSYSVPH TLLVQFNSDA IDETDLLEET LRPRIESIGG
241 TLEKVRLNGN HLTPCIQDPK WQIGTVYTPA DAVAQALKTI PLSETRVLSR TIVDWFRRFE
301 N
//