LOCUS AEE77803.1 373 aa PRT PLN 23-MAR-2023
DEFINITION Arabidopsis thaliana initiation factor 4F subunit (DUF1350)
protein.
ACCESSION CP002686-5805
PROTEIN_ID AEE77803.1
SOURCE Arabidopsis thaliana (thale cress)
ORGANISM Arabidopsis thaliana
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
Pentapetalae; rosids; malvids; Brassicales; Brassicaceae;
Camelineae; Arabidopsis.
REFERENCE 1 (bases 1 to 23459830)
AUTHORS Salanoubat,M., Lemcke,K., Rieger,M., Ansorge,W., Unseld,M.,
Fartmann,B., Valle,G., Blocker,H., Perez-Alonso,M., Obermaier,B.,
Delseny,M., Boutry,M., Grivell,L.A., Mache,R., Puigdomenech,P., De
Simone,V., Choisne,N., Artiguenave,F., Robert,C., Brottier,P.,
Wincker,P., Cattolico,L., Weissenbach,J., Saurin,W., Quetier,F.,
Schafer,M., Muller-Auer,S., Gabel,C., Fuchs,M., Benes,V.,
Wurmbach,E., Drzonek,H., Erfle,H., Jordan,N., Bangert,S.,
Wiedelmann,R., Kranz,H., Voss,H., Holland,R., Brandt,P.,
Nyakatura,G., Vezzi,A., D'Angelo,M., Pallavicini,A., Toppo,S.,
Simionati,B., Conrad,A., Hornischer,K., Kauer,G., Lohnert,T.H.,
Nordsiek,G., Reichelt,J., Scharfe,M., Schon,O., Bargues,M.,
Terol,J., Climent,J., Navarro,P., Collado,C., Perez-Perez,A.,
Ottenwalder,B., Duchemin,D., Cooke,R., Laudie,M., Berger-Llauro,C.,
Purnelle,B., Masuy,D., de Haan,M., Maarse,A.C., Alcaraz,J.P.,
Cottet,A., Casacuberta,E., Monfort,A., Argiriou,A., flores,M.,
Liguori,R., Vitale,D., Mannhaupt,G., Haase,D., Schoof,H., Rudd,S.,
Zaccaria,P., Mewes,H.W., Mayer,K.F., Kaul,S., Town,C.D., Koo,H.L.,
Tallon,L.J., Jenkins,J., Rooney,T., Rizzo,M., Walts,A.,
Utterback,T., Fujii,C.Y., Shea,T.P., Creasy,T.H., Haas,B.,
Maiti,R., Wu,D., Peterson,J., Van Aken,S., Pai,G., Militscher,J.,
Sellers,P., Gill,J.E., Feldblyum,T.V., Preuss,D., Lin,X.,
Nierman,W.C., Salzberg,S.L., White,O., Venter,J.C., Fraser,C.M.,
Kaneko,T., Nakamura,Y., Sato,S., Kato,T., Asamizu,E., Sasamoto,S.,
Kimura,T., Idesawa,K., Kawashima,K., Kishida,Y., Kiyokawa,C.,
Kohara,M., Matsumoto,M., Matsuno,A., Muraki,A., Nakayama,S.,
Nakazaki,N., Shinpo,S., Takeuchi,C., Wada,T., Watanabe,A.,
Yamada,M., Yasuda,M. and Tabata,S.
CONSRTM European Union Chromosome 3 Arabidopsis Sequencing Consortium;
Institute for Genomic Research; Kazusa DNA Research Institute
TITLE Sequence and analysis of chromosome 3 of the plant Arabidopsis
thaliana
JOURNAL Nature 408 (6814), 820-822 (2000)
PUBMED 11130713
REFERENCE 2 (bases 1 to 23459830)
AUTHORS Swarbreck,D., Lamesch,P., Wilks,C. and Huala,E.
CONSRTM TAIR
TITLE Direct Submission
JOURNAL Submitted (18-FEB-2011) Department of Plant Biology, Carnegie
Institution, 260 Panama Street, Stanford, CA, USA
REFERENCE 3 (bases 1 to 23459830)
AUTHORS Krishnakumar,V., Cheng,C.-Y., Chan,A.P., Schobel,S., Kim,M.,
Ferlanti,E.S., Belyaeva,I., Rosen,B.D., Micklem,G., Miller,J.R.,
Vaughn,M. and Town,C.D.
TITLE Direct Submission
JOURNAL Submitted (17-MAY-2016) Plant Genomics, J. Craig Venter Institute,
9704 Medical Center Dr, Rockville, MD 20850, USA
REMARK Protein update by submitter
FEATURES Qualifiers
source /organism="Arabidopsis thaliana"
/mol_type="genomic DNA"
/db_xref="taxon:3702"
/chromosome="3"
/ecotype="Columbia"
protein /locus_tag="AT3G43540"
/inference="Similar to RNA sequence,
EST:INSD:EL104786.1,INSD:AV822550.1,INSD:DR303331.1,
INSD:EL125839.1,INSD:BP865010.1,INSD:DR303326.1,
INSD:EL334788.1,INSD:EL065866.1,INSD:EL046172.1,
INSD:DR303318.1,INSD:BP667196.1,INSD:BP849314.1,
INSD:EL281968.1,INSD:DR303329.1,INSD:DR303317.1,
INSD:DR303330.1,INSD:DR303320.1,INSD:EH919588.1,
INSD:EL074752.1,INSD:EH987492.1,INSD:ES082040.1,
INSD:DR303322.1,INSD:DR303323.1,INSD:DR303333.1,
INSD:EH809023.1,INSD:DR303324.1,INSD:AV548344.1,
INSD:DR303315.1,INSD:DR303319.1,INSD:DR303325.1,
INSD:DR303332.1,INSD:DR303321.1,INSD:EH916536.1,
INSD:DR303328.1,INSD:DR303327.1,INSD:EH829981.1,
INSD:DR303316.1,INSD:EL222885.1,INSD:CF774005.1"
/inference="Similar to RNA sequence,
mRNA:INSD:AY079370.1,INSD:AY040022.1,INSD:BX825517.1,
INSD:BX825855.1"
/note="Protein of unknown function (DUF1350); FUNCTIONS
IN: molecular_function unknown; INVOLVED IN:
biological_process unknown; LOCATED IN: chloroplast;
EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13
growth stages; CONTAINS InterPro DOMAIN/s: Protein of
unknown function DUF1350 (InterPro:IPR010765); BEST
Arabidopsis thaliana protein match is: Protein of unknown
function (DUF1350) (TAIR:AT5G47860.1); Has 426 Blast hits
to 356 proteins in 87 species: Archae - 0; Bacteria - 208;
Metazoa - 0; Fungi - 0; Plants - 83; Viruses - 0; Other
Eukaryotes - 135 (source: NCBI BLink)."
/db_xref="TAIR:AT3G43540"
/db_xref="Araport:AT3G43540"
intron_pos 83:2 (1/8)
intron_pos 151:2 (2/8)
intron_pos 171:0 (3/8)
intron_pos 192:0 (4/8)
intron_pos 217:1 (5/8)
intron_pos 256:0 (6/8)
intron_pos 286:0 (7/8)
intron_pos 330:0 (8/8)
BEGIN
1 MEFGLATSSF LGTQLIPATL FSKRARALSL TVTATGGSRN NKVYTRLDSC LVIPPPPKFK
61 KPRAIVKFLG GAFVGAVPEL TYSYLKELLA KEGYLIVSVP YNVTFDHEQA AKQVYERFNS
121 CLDTIVSSGI PNSNLKPGDL ADLPLFSVGH SNGALLQVLT GSYFAEKIPK VNAIISFNNK
181 SATEAVPYFE QLGPLIQQML PMVEASPVYE MARNASGDVL KLLLDTAGTT ILNNDQEALK
241 SFTKLVDQLP SVFGEVGQGV SEFRPSPLEN RNCFKCSYSV PHTLLVQFNS DAIDETDLLE
301 ETLRPRIESI GGTLEKVRLN GNHLTPCIQD PKWQIGTVYT PADAVAQALK TIPLSETRVL
361 SRTIVDWFRR FEN
//