LOCUS AEE77797.1 458 aa PRT PLN 23-MAR-2023
DEFINITION Arabidopsis thaliana zinc ion binding / nucleic acid binding
protein protein.
ACCESSION CP002686-5798
PROTEIN_ID AEE77797.1
SOURCE Arabidopsis thaliana (thale cress)
ORGANISM Arabidopsis thaliana
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
Pentapetalae; rosids; malvids; Brassicales; Brassicaceae;
Camelineae; Arabidopsis.
REFERENCE 1 (bases 1 to 23459830)
AUTHORS Salanoubat,M., Lemcke,K., Rieger,M., Ansorge,W., Unseld,M.,
Fartmann,B., Valle,G., Blocker,H., Perez-Alonso,M., Obermaier,B.,
Delseny,M., Boutry,M., Grivell,L.A., Mache,R., Puigdomenech,P., De
Simone,V., Choisne,N., Artiguenave,F., Robert,C., Brottier,P.,
Wincker,P., Cattolico,L., Weissenbach,J., Saurin,W., Quetier,F.,
Schafer,M., Muller-Auer,S., Gabel,C., Fuchs,M., Benes,V.,
Wurmbach,E., Drzonek,H., Erfle,H., Jordan,N., Bangert,S.,
Wiedelmann,R., Kranz,H., Voss,H., Holland,R., Brandt,P.,
Nyakatura,G., Vezzi,A., D'Angelo,M., Pallavicini,A., Toppo,S.,
Simionati,B., Conrad,A., Hornischer,K., Kauer,G., Lohnert,T.H.,
Nordsiek,G., Reichelt,J., Scharfe,M., Schon,O., Bargues,M.,
Terol,J., Climent,J., Navarro,P., Collado,C., Perez-Perez,A.,
Ottenwalder,B., Duchemin,D., Cooke,R., Laudie,M., Berger-Llauro,C.,
Purnelle,B., Masuy,D., de Haan,M., Maarse,A.C., Alcaraz,J.P.,
Cottet,A., Casacuberta,E., Monfort,A., Argiriou,A., flores,M.,
Liguori,R., Vitale,D., Mannhaupt,G., Haase,D., Schoof,H., Rudd,S.,
Zaccaria,P., Mewes,H.W., Mayer,K.F., Kaul,S., Town,C.D., Koo,H.L.,
Tallon,L.J., Jenkins,J., Rooney,T., Rizzo,M., Walts,A.,
Utterback,T., Fujii,C.Y., Shea,T.P., Creasy,T.H., Haas,B.,
Maiti,R., Wu,D., Peterson,J., Van Aken,S., Pai,G., Militscher,J.,
Sellers,P., Gill,J.E., Feldblyum,T.V., Preuss,D., Lin,X.,
Nierman,W.C., Salzberg,S.L., White,O., Venter,J.C., Fraser,C.M.,
Kaneko,T., Nakamura,Y., Sato,S., Kato,T., Asamizu,E., Sasamoto,S.,
Kimura,T., Idesawa,K., Kawashima,K., Kishida,Y., Kiyokawa,C.,
Kohara,M., Matsumoto,M., Matsuno,A., Muraki,A., Nakayama,S.,
Nakazaki,N., Shinpo,S., Takeuchi,C., Wada,T., Watanabe,A.,
Yamada,M., Yasuda,M. and Tabata,S.
CONSRTM European Union Chromosome 3 Arabidopsis Sequencing Consortium;
Institute for Genomic Research; Kazusa DNA Research Institute
TITLE Sequence and analysis of chromosome 3 of the plant Arabidopsis
thaliana
JOURNAL Nature 408 (6814), 820-822 (2000)
PUBMED 11130713
REFERENCE 2 (bases 1 to 23459830)
AUTHORS Swarbreck,D., Lamesch,P., Wilks,C. and Huala,E.
CONSRTM TAIR
TITLE Direct Submission
JOURNAL Submitted (18-FEB-2011) Department of Plant Biology, Carnegie
Institution, 260 Panama Street, Stanford, CA, USA
REFERENCE 3 (bases 1 to 23459830)
AUTHORS Krishnakumar,V., Cheng,C.-Y., Chan,A.P., Schobel,S., Kim,M.,
Ferlanti,E.S., Belyaeva,I., Rosen,B.D., Micklem,G., Miller,J.R.,
Vaughn,M. and Town,C.D.
TITLE Direct Submission
JOURNAL Submitted (17-MAY-2016) Plant Genomics, J. Craig Venter Institute,
9704 Medical Center Dr, Rockville, MD 20850, USA
REMARK Protein update by submitter
FEATURES Qualifiers
source /organism="Arabidopsis thaliana"
/mol_type="genomic DNA"
/db_xref="taxon:3702"
/chromosome="3"
/ecotype="Columbia"
protein /locus_tag="AT3G43470"
/inference="Similar to RNA sequence,
EST:INSD:EG497898.1,INSD:EG497885.1,INSD:EG497912.1,
INSD:EG497891.1,INSD:EG497896.1"
/note="zinc ion binding;nucleic acid binding; FUNCTIONS
IN: zinc ion binding, nucleic acid binding; INVOLVED IN:
biological_process unknown; LOCATED IN: cellular_component
unknown; CONTAINS InterPro DOMAIN/s: Zinc finger,
CCHC-type (InterPro:IPR001878); BEST Arabidopsis thaliana
protein match is: Zinc knuckle (CCHC-type) family protein
(TAIR:AT2G15180.1); Has 11 Blast hits to 9 proteins in 1
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0;
Plants - 11; Viruses - 0; Other Eukaryotes - 0 (source:
NCBI BLink)."
/db_xref="TAIR:AT3G43470"
/db_xref="Araport:AT3G43470"
intron_pos 71:2 (1/2)
intron_pos 124:2 (2/2)
BEGIN
1 METIEYSSSD EEDSYGYSQD SYYNETRFVE SWHDDGYSSG SDFEEEPYGG APEPEPPDRY
61 SSSYTTPSYP KPKIRMWENL KWIMYEKYCP QCLNQGRKTT FPPKQAIQGD KMPKTTLNLT
121 EKSWCKGQGH IAKDCPTKKS SPRQEPTLCL HPQVLQKQVD VSTLQHDQVQ TEACQIDYNV
181 PMTLLMHLSS AKSIEKVSGT KEIIKDQGKV STMEKVFTKE TQNQGELTLK KVVVNKDESV
241 KDIIPIKEEP PNAQQFLQTQ CKLLNPYTLQ WSNLTYLCVG KQVLRTKPLE EGGDNVRMGA
301 DVPADALVDR LLVRLLDGLS DGLPEVLHVS NQLVRTKESY PFLPFCASQS HIWKPGDPLR
361 HPEPFTLNPW CIFPYVNPLS EDFPFPDLNE IKSQRLYFDH LLGIKKPPTM TLDVPKSHHF
421 QPKLSRLKTH HKFPYLADFV TKVPTAIFSF IVAISLLL
//