LOCUS AEE77778.1 747 aa PRT PLN 23-MAR-2023
DEFINITION Arabidopsis thaliana ARID/BRIGHT DNA-binding domain-containing
protein protein.
ACCESSION CP002686-5779
PROTEIN_ID AEE77778.1
SOURCE Arabidopsis thaliana (thale cress)
ORGANISM Arabidopsis thaliana
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
Pentapetalae; rosids; malvids; Brassicales; Brassicaceae;
Camelineae; Arabidopsis.
REFERENCE 1 (bases 1 to 23459830)
AUTHORS Salanoubat,M., Lemcke,K., Rieger,M., Ansorge,W., Unseld,M.,
Fartmann,B., Valle,G., Blocker,H., Perez-Alonso,M., Obermaier,B.,
Delseny,M., Boutry,M., Grivell,L.A., Mache,R., Puigdomenech,P., De
Simone,V., Choisne,N., Artiguenave,F., Robert,C., Brottier,P.,
Wincker,P., Cattolico,L., Weissenbach,J., Saurin,W., Quetier,F.,
Schafer,M., Muller-Auer,S., Gabel,C., Fuchs,M., Benes,V.,
Wurmbach,E., Drzonek,H., Erfle,H., Jordan,N., Bangert,S.,
Wiedelmann,R., Kranz,H., Voss,H., Holland,R., Brandt,P.,
Nyakatura,G., Vezzi,A., D'Angelo,M., Pallavicini,A., Toppo,S.,
Simionati,B., Conrad,A., Hornischer,K., Kauer,G., Lohnert,T.H.,
Nordsiek,G., Reichelt,J., Scharfe,M., Schon,O., Bargues,M.,
Terol,J., Climent,J., Navarro,P., Collado,C., Perez-Perez,A.,
Ottenwalder,B., Duchemin,D., Cooke,R., Laudie,M., Berger-Llauro,C.,
Purnelle,B., Masuy,D., de Haan,M., Maarse,A.C., Alcaraz,J.P.,
Cottet,A., Casacuberta,E., Monfort,A., Argiriou,A., flores,M.,
Liguori,R., Vitale,D., Mannhaupt,G., Haase,D., Schoof,H., Rudd,S.,
Zaccaria,P., Mewes,H.W., Mayer,K.F., Kaul,S., Town,C.D., Koo,H.L.,
Tallon,L.J., Jenkins,J., Rooney,T., Rizzo,M., Walts,A.,
Utterback,T., Fujii,C.Y., Shea,T.P., Creasy,T.H., Haas,B.,
Maiti,R., Wu,D., Peterson,J., Van Aken,S., Pai,G., Militscher,J.,
Sellers,P., Gill,J.E., Feldblyum,T.V., Preuss,D., Lin,X.,
Nierman,W.C., Salzberg,S.L., White,O., Venter,J.C., Fraser,C.M.,
Kaneko,T., Nakamura,Y., Sato,S., Kato,T., Asamizu,E., Sasamoto,S.,
Kimura,T., Idesawa,K., Kawashima,K., Kishida,Y., Kiyokawa,C.,
Kohara,M., Matsumoto,M., Matsuno,A., Muraki,A., Nakayama,S.,
Nakazaki,N., Shinpo,S., Takeuchi,C., Wada,T., Watanabe,A.,
Yamada,M., Yasuda,M. and Tabata,S.
CONSRTM European Union Chromosome 3 Arabidopsis Sequencing Consortium;
Institute for Genomic Research; Kazusa DNA Research Institute
TITLE Sequence and analysis of chromosome 3 of the plant Arabidopsis
thaliana
JOURNAL Nature 408 (6814), 820-822 (2000)
PUBMED 11130713
REFERENCE 2 (bases 1 to 23459830)
AUTHORS Swarbreck,D., Lamesch,P., Wilks,C. and Huala,E.
CONSRTM TAIR
TITLE Direct Submission
JOURNAL Submitted (18-FEB-2011) Department of Plant Biology, Carnegie
Institution, 260 Panama Street, Stanford, CA, USA
REFERENCE 3 (bases 1 to 23459830)
AUTHORS Krishnakumar,V., Cheng,C.-Y., Chan,A.P., Schobel,S., Kim,M.,
Ferlanti,E.S., Belyaeva,I., Rosen,B.D., Micklem,G., Miller,J.R.,
Vaughn,M. and Town,C.D.
TITLE Direct Submission
JOURNAL Submitted (17-MAY-2016) Plant Genomics, J. Craig Venter Institute,
9704 Medical Center Dr, Rockville, MD 20850, USA
REMARK Protein update by submitter
FEATURES Qualifiers
source /organism="Arabidopsis thaliana"
/mol_type="genomic DNA"
/db_xref="taxon:3702"
/chromosome="3"
/ecotype="Columbia"
protein /locus_tag="AT3G43240"
/inference="Similar to RNA sequence,
EST:INSD:EL998248.1,INSD:EL258567.1,INSD:EL188709.1,
INSD:ES166180.1,INSD:EG445118.1,INSD:EH832480.1,
INSD:ES041806.1,INSD:DR355105.1,INSD:EL164671.1,
INSD:EL133118.1,INSD:AV558361.1,INSD:BX841306.1,
INSD:CK119115.1,INSD:ES188628.1,INSD:BP852922.1,
INSD:EL134385.1,INSD:EH846533.1,INSD:EH816184.1,
INSD:EL223513.1,INSD:ES188626.1,INSD:DR358826.1,
INSD:EH945247.1,INSD:ES199136.1,INSD:EH900967.1"
/inference="Similar to RNA sequence, mRNA:INSD:BT010580.1"
/note="ARID/BRIGHT DNA-binding domain-containing protein;
FUNCTIONS IN: DNA binding, zinc ion binding; LOCATED IN:
intracellular; EXPRESSED IN: 21 plant structures;
EXPRESSED DURING: 13 growth stages; CONTAINS InterPro
DOMAIN/s: Zinc finger, PHD-type (InterPro:IPR001965), Zinc
finger, FYVE/PHD-type (InterPro:IPR011011), ARID/BRIGHT
DNA-binding domain (InterPro:IPR001606); Has 133 Blast
hits to 125 proteins in 37 species: Archae - 0; Bacteria -
0; Metazoa - 21; Fungi - 9; Plants - 99; Viruses - 0;
Other Eukaryotes - 4 (source: NCBI BLink)."
/db_xref="TAIR:AT3G43240"
/db_xref="Araport:AT3G43240"
intron_pos 52:0 (1/15)
intron_pos 116:0 (2/15)
intron_pos 134:0 (3/15)
intron_pos 163:2 (4/15)
intron_pos 256:0 (5/15)
intron_pos 275:0 (6/15)
intron_pos 285:2 (7/15)
intron_pos 331:0 (8/15)
intron_pos 389:0 (9/15)
intron_pos 469:0 (10/15)
intron_pos 570:0 (11/15)
intron_pos 616:0 (12/15)
intron_pos 649:0 (13/15)
intron_pos 682:2 (14/15)
intron_pos 713:0 (15/15)
BEGIN
1 MFHGQGFSRN RCNVVAVVSG AELCDTNNQI DGTSHQPKYP FPDLSSSGRL KFQVLNNPTP
61 EEFQVAVNSS ATDFVYLQGE HSGDSDEVGP LVLGYTDFST PDALVTLFGS TLPTTVYLEL
121 PNGEELAQAL YSKGVQYVIY WKNVFSKYAA CHFRHSLFSV IQSSCSDTWD VFHVAEASFR
181 LYCTSDNAVL PSNSNRKMNY EMGPCLLGEP PKIDVVSPEA DELEEENSLE SLPSIKIYDE
241 DVTVRFLLCG PPCTVDTFLL GSLMDGLNAL LRIEMRGSKL HNRSSAPAPP LQAGTFTRGV
301 VTMRCDVSTC SSAHISMLVS GNAQTCFSDQ LLENHIKHEV VEKIQLVHSV VNSEETKRGF
361 SEPRRSASIA CGASVCEVSM QVPTWALQVL RQLAPDVSYR SLVVLGVASI QGLSVASFEK
421 DDAERLLFFC GQQINDTSNH DALLSKIPNW LTPPLPTRKR SEPCRESKEI ENGGPTSRKI
481 NVAALRPIPH TRRHKMIPFS GYSEIGRFDG DHTKGSLPMP PKHGASGGTP VTHRKAFSGS
541 YQRKQIISLN PLPLKKHDCG RAHIQVCSEE EFLRDVMQFL LIRGHTRLVP PGGLAEFPDA
601 VLNSKRLDLF NLYREVVSRG GFHVGNGINW KGQVFSKMRN HTLTNRMTGV GNTLKRHYET
661 YLLEYEYAHD DVDGECCLIC RSSTAGDWVN CGSCGEWAHF GCDRRPGLGA FKDYAKTDGL
721 EYVCPNCSVS NYRKKSQKTS NGGLLVP
//