LOCUS AEE77752.1 250 aa PRT PLN 23-MAR-2023
DEFINITION Arabidopsis thaliana alfin-like 3 protein.
ACCESSION CP002686-5745
PROTEIN_ID AEE77752.1
SOURCE Arabidopsis thaliana (thale cress)
ORGANISM Arabidopsis thaliana
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
Pentapetalae; rosids; malvids; Brassicales; Brassicaceae;
Camelineae; Arabidopsis.
REFERENCE 1 (bases 1 to 23459830)
AUTHORS Salanoubat,M., Lemcke,K., Rieger,M., Ansorge,W., Unseld,M.,
Fartmann,B., Valle,G., Blocker,H., Perez-Alonso,M., Obermaier,B.,
Delseny,M., Boutry,M., Grivell,L.A., Mache,R., Puigdomenech,P., De
Simone,V., Choisne,N., Artiguenave,F., Robert,C., Brottier,P.,
Wincker,P., Cattolico,L., Weissenbach,J., Saurin,W., Quetier,F.,
Schafer,M., Muller-Auer,S., Gabel,C., Fuchs,M., Benes,V.,
Wurmbach,E., Drzonek,H., Erfle,H., Jordan,N., Bangert,S.,
Wiedelmann,R., Kranz,H., Voss,H., Holland,R., Brandt,P.,
Nyakatura,G., Vezzi,A., D'Angelo,M., Pallavicini,A., Toppo,S.,
Simionati,B., Conrad,A., Hornischer,K., Kauer,G., Lohnert,T.H.,
Nordsiek,G., Reichelt,J., Scharfe,M., Schon,O., Bargues,M.,
Terol,J., Climent,J., Navarro,P., Collado,C., Perez-Perez,A.,
Ottenwalder,B., Duchemin,D., Cooke,R., Laudie,M., Berger-Llauro,C.,
Purnelle,B., Masuy,D., de Haan,M., Maarse,A.C., Alcaraz,J.P.,
Cottet,A., Casacuberta,E., Monfort,A., Argiriou,A., flores,M.,
Liguori,R., Vitale,D., Mannhaupt,G., Haase,D., Schoof,H., Rudd,S.,
Zaccaria,P., Mewes,H.W., Mayer,K.F., Kaul,S., Town,C.D., Koo,H.L.,
Tallon,L.J., Jenkins,J., Rooney,T., Rizzo,M., Walts,A.,
Utterback,T., Fujii,C.Y., Shea,T.P., Creasy,T.H., Haas,B.,
Maiti,R., Wu,D., Peterson,J., Van Aken,S., Pai,G., Militscher,J.,
Sellers,P., Gill,J.E., Feldblyum,T.V., Preuss,D., Lin,X.,
Nierman,W.C., Salzberg,S.L., White,O., Venter,J.C., Fraser,C.M.,
Kaneko,T., Nakamura,Y., Sato,S., Kato,T., Asamizu,E., Sasamoto,S.,
Kimura,T., Idesawa,K., Kawashima,K., Kishida,Y., Kiyokawa,C.,
Kohara,M., Matsumoto,M., Matsuno,A., Muraki,A., Nakayama,S.,
Nakazaki,N., Shinpo,S., Takeuchi,C., Wada,T., Watanabe,A.,
Yamada,M., Yasuda,M. and Tabata,S.
CONSRTM European Union Chromosome 3 Arabidopsis Sequencing Consortium;
Institute for Genomic Research; Kazusa DNA Research Institute
TITLE Sequence and analysis of chromosome 3 of the plant Arabidopsis
thaliana
JOURNAL Nature 408 (6814), 820-822 (2000)
PUBMED 11130713
REFERENCE 2 (bases 1 to 23459830)
AUTHORS Swarbreck,D., Lamesch,P., Wilks,C. and Huala,E.
CONSRTM TAIR
TITLE Direct Submission
JOURNAL Submitted (18-FEB-2011) Department of Plant Biology, Carnegie
Institution, 260 Panama Street, Stanford, CA, USA
REFERENCE 3 (bases 1 to 23459830)
AUTHORS Krishnakumar,V., Cheng,C.-Y., Chan,A.P., Schobel,S., Kim,M.,
Ferlanti,E.S., Belyaeva,I., Rosen,B.D., Micklem,G., Miller,J.R.,
Vaughn,M. and Town,C.D.
TITLE Direct Submission
JOURNAL Submitted (17-MAY-2016) Plant Genomics, J. Craig Venter Institute,
9704 Medical Center Dr, Rockville, MD 20850, USA
REMARK Protein update by submitter
FEATURES Qualifiers
source /organism="Arabidopsis thaliana"
/mol_type="genomic DNA"
/db_xref="taxon:3702"
/chromosome="3"
/ecotype="Columbia"
protein /gene="AL3"
/locus_tag="AT3G42790"
/gene_synonym="alfin-like 3"
/inference="Similar to RNA sequence,
EST:INSD:BP623539.1,INSD:EH940715.1,INSD:EL239969.1,
INSD:ES072823.1,INSD:ES150576.1,INSD:EH871471.1,
INSD:EL087022.1,INSD:BP573093.1,INSD:EL328594.1,
INSD:BP863675.1,INSD:EL152136.1,INSD:BP860331.1,
INSD:EL286131.1,INSD:EL266597.1,INSD:AV818903.1,
INSD:EL002455.1,INSD:BP667286.1,INSD:BP569378.1,
INSD:BP851926.1,INSD:EL014597.1,INSD:ES051122.1,
INSD:BU636557.1,INSD:EL108872.1,INSD:EG497725.1,
INSD:EH945549.1,INSD:ES085922.1,INSD:EH972110.1,
INSD:ES104217.1,INSD:BU636233.1,INSD:EL135421.1,
INSD:EH804908.1,INSD:ES203459.1,INSD:EH844563.1,
INSD:BP572961.1,INSD:BP849309.1,INSD:ES013790.1,
INSD:CB262538.1,INSD:EH914240.1,INSD:EL325742.1,
INSD:EL060794.1,INSD:EL048785.1,INSD:EH795583.1,
INSD:EL247486.1,INSD:EL231056.1,INSD:ES117944.1,
INSD:ES124143.1,INSD:CB257979.1,INSD:EL166541.1,
INSD:ES186285.1,INSD:DR355568.1,INSD:EL136956.1,
INSD:ES135243.1,INSD:AV805432.1,INSD:EG514527.1,
INSD:EH862128.1,INSD:EL992977.1,INSD:ES211390.1,
INSD:EL015793.1,INSD:EL313015.1,INSD:EG497724.1,
INSD:EL315550.1,INSD:EL049092.1,INSD:EL036627.1,
INSD:ES099468.1,INSD:EH979716.1,INSD:CB253507.1,
INSD:EL246147.1,INSD:BP641306.1,INSD:EL096103.1,
INSD:EL059303.1,INSD:EH819379.1,INSD:BP803511.1,
INSD:BP575743.1,INSD:ES110647.1,INSD:ES036091.1,
INSD:BP847967.1,INSD:EL996131.1,INSD:EL296706.1,
INSD:AV784716.1,INSD:ES090266.1,INSD:EL269563.1,
INSD:BP635704.1,INSD:EG514025.1,INSD:BP647643.1,
INSD:BP636076.1,INSD:BP590836.1,INSD:EL975077.1,
INSD:EL057128.1,INSD:DR364807.1,INSD:BP576031.1,
INSD:EG516040.1,INSD:EL107625.1,INSD:EH911196.1,
INSD:EL056240.1,INSD:DR364804.1,INSD:DR364803.1,
INSD:EL282148.1,INSD:ES067318.1,INSD:EL205774.1,
INSD:EG516039.1,INSD:ES026712.1,INSD:BP861461.1,
INSD:AV823696.1,INSD:EL278096.1,INSD:ES076533.1,
INSD:EL137022.1,INSD:ES105838.1,INSD:ES007600.1,
INSD:ES077873.1,INSD:EL086870.1,INSD:EL318862.1,
INSD:EL152507.1,INSD:EH943939.1,INSD:EL287677.1,
INSD:EL294613.1,INSD:CB262716.1,INSD:EH814287.1,
INSD:ES112536.1,INSD:EL972300.1,INSD:BP647399.1,
INSD:BP852240.1,INSD:BP858872.1,INSD:BP632272.1,
INSD:EL194271.1,INSD:BP630072.1,INSD:ES150214.1,
INSD:BP860588.1,INSD:BP603562.1,INSD:EH990656.1,
INSD:EL258370.1,INSD:EL983422.1,INSD:EL106493.1,
INSD:ES062935.1,INSD:EL079418.1,INSD:ES068003.1,
INSD:EH909487.1,INSD:EL131805.1,INSD:EL127444.1,
INSD:ES072547.1,INSD:EL122122.1,INSD:BP666352.1,
INSD:ES118899.1,INSD:ES194418.1,INSD:ES025254.1"
/inference="Similar to RNA sequence,
mRNA:INSD:BX823251.1,INSD:BX823497.1,INSD:BX824888.1,
INSD:AY114574.1,INSD:AY062851.1"
/note="alfin-like 3 (AL3); CONTAINS InterPro DOMAIN/s:
Zinc finger, PHD-type, conserved site
(InterPro:IPR019786), Zinc finger, PHD-type
(InterPro:IPR001965), Protein of unknown function DUF3594
(InterPro:IPR021998), Zinc finger, FYVE/PHD-type
(InterPro:IPR011011), Zinc finger, PHD-finger
(InterPro:IPR019787); BEST Arabidopsis thaliana protein
match is: alfin-like 5 (TAIR:AT5G20510.1); Has 1689 Blast
hits to 1654 proteins in 192 species: Archae - 0; Bacteria
- 0; Metazoa - 785; Fungi - 353; Plants - 465; Viruses -
0; Other Eukaryotes - 86 (source: NCBI BLink)."
/db_xref="TAIR:AT3G42790"
/db_xref="Araport:AT3G42790"
intron_pos 34:1 (1/4)
intron_pos 45:1 (2/4)
intron_pos 121:2 (3/4)
intron_pos 165:0 (4/4)
BEGIN
1 MEGGAALYNP RTVEEVFKDF KGRRTAIVKA LTTDVQEFYQ QCDPEKENLC LYGLPNEEWE
61 VNLPAEEVPP ELPEPALGIN FARDGLSEKE WLSLVAIHSD AWLLSVSFYF GSRFSFHKEE
121 RKRLFNMIND VPTIFEVVTG MAKAKDKSSA ANQNGNKSKS NSKVRTSEGK SSKTKQPKEE
181 DEEIDEDDED DHGETLCGAC GDSDGADEFW ICCDLCEKWF HGKCVKITPA RAEHIKQYKC
241 PSCSNKRARA
//