LOCUS AEE77621.1 510 aa PRT PLN 23-MAR-2023
DEFINITION Arabidopsis thaliana Plant transposase (Ptta/En/Spm family)
protein.
ACCESSION CP002686-5592
PROTEIN_ID AEE77621.1
SOURCE Arabidopsis thaliana (thale cress)
ORGANISM Arabidopsis thaliana
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
Pentapetalae; rosids; malvids; Brassicales; Brassicaceae;
Camelineae; Arabidopsis.
REFERENCE 1 (bases 1 to 23459830)
AUTHORS Salanoubat,M., Lemcke,K., Rieger,M., Ansorge,W., Unseld,M.,
Fartmann,B., Valle,G., Blocker,H., Perez-Alonso,M., Obermaier,B.,
Delseny,M., Boutry,M., Grivell,L.A., Mache,R., Puigdomenech,P., De
Simone,V., Choisne,N., Artiguenave,F., Robert,C., Brottier,P.,
Wincker,P., Cattolico,L., Weissenbach,J., Saurin,W., Quetier,F.,
Schafer,M., Muller-Auer,S., Gabel,C., Fuchs,M., Benes,V.,
Wurmbach,E., Drzonek,H., Erfle,H., Jordan,N., Bangert,S.,
Wiedelmann,R., Kranz,H., Voss,H., Holland,R., Brandt,P.,
Nyakatura,G., Vezzi,A., D'Angelo,M., Pallavicini,A., Toppo,S.,
Simionati,B., Conrad,A., Hornischer,K., Kauer,G., Lohnert,T.H.,
Nordsiek,G., Reichelt,J., Scharfe,M., Schon,O., Bargues,M.,
Terol,J., Climent,J., Navarro,P., Collado,C., Perez-Perez,A.,
Ottenwalder,B., Duchemin,D., Cooke,R., Laudie,M., Berger-Llauro,C.,
Purnelle,B., Masuy,D., de Haan,M., Maarse,A.C., Alcaraz,J.P.,
Cottet,A., Casacuberta,E., Monfort,A., Argiriou,A., flores,M.,
Liguori,R., Vitale,D., Mannhaupt,G., Haase,D., Schoof,H., Rudd,S.,
Zaccaria,P., Mewes,H.W., Mayer,K.F., Kaul,S., Town,C.D., Koo,H.L.,
Tallon,L.J., Jenkins,J., Rooney,T., Rizzo,M., Walts,A.,
Utterback,T., Fujii,C.Y., Shea,T.P., Creasy,T.H., Haas,B.,
Maiti,R., Wu,D., Peterson,J., Van Aken,S., Pai,G., Militscher,J.,
Sellers,P., Gill,J.E., Feldblyum,T.V., Preuss,D., Lin,X.,
Nierman,W.C., Salzberg,S.L., White,O., Venter,J.C., Fraser,C.M.,
Kaneko,T., Nakamura,Y., Sato,S., Kato,T., Asamizu,E., Sasamoto,S.,
Kimura,T., Idesawa,K., Kawashima,K., Kishida,Y., Kiyokawa,C.,
Kohara,M., Matsumoto,M., Matsuno,A., Muraki,A., Nakayama,S.,
Nakazaki,N., Shinpo,S., Takeuchi,C., Wada,T., Watanabe,A.,
Yamada,M., Yasuda,M. and Tabata,S.
CONSRTM European Union Chromosome 3 Arabidopsis Sequencing Consortium;
Institute for Genomic Research; Kazusa DNA Research Institute
TITLE Sequence and analysis of chromosome 3 of the plant Arabidopsis
thaliana
JOURNAL Nature 408 (6814), 820-822 (2000)
PUBMED 11130713
REFERENCE 2 (bases 1 to 23459830)
AUTHORS Swarbreck,D., Lamesch,P., Wilks,C. and Huala,E.
CONSRTM TAIR
TITLE Direct Submission
JOURNAL Submitted (18-FEB-2011) Department of Plant Biology, Carnegie
Institution, 260 Panama Street, Stanford, CA, USA
REFERENCE 3 (bases 1 to 23459830)
AUTHORS Krishnakumar,V., Cheng,C.-Y., Chan,A.P., Schobel,S., Kim,M.,
Ferlanti,E.S., Belyaeva,I., Rosen,B.D., Micklem,G., Miller,J.R.,
Vaughn,M. and Town,C.D.
TITLE Direct Submission
JOURNAL Submitted (17-MAY-2016) Plant Genomics, J. Craig Venter Institute,
9704 Medical Center Dr, Rockville, MD 20850, USA
REMARK Protein update by submitter
FEATURES Qualifiers
source /organism="Arabidopsis thaliana"
/mol_type="genomic DNA"
/db_xref="taxon:3702"
/chromosome="3"
/ecotype="Columbia"
protein /locus_tag="AT3G30200"
/note="Plant transposase (Ptta/En/Spm family); FUNCTIONS
IN: molecular_function unknown; INVOLVED IN:
biological_process unknown; LOCATED IN: cellular_component
unknown; EXPRESSED IN: cultured cell; CONTAINS InterPro
DOMAIN/s: Transposase, Ptta/En/Spm, plant
(InterPro:IPR004252); BEST Arabidopsis thaliana protein
match is: Plant transposase (Ptta/En/Spm family)
(TAIR:AT1G40087.1); Has 256 Blast hits to 254 proteins in
18 species: Archae - 0; Bacteria - 2; Metazoa - 0; Fungi -
0; Plants - 254; Viruses - 0; Other Eukaryotes - 0
(source: NCBI BLink)."
/db_xref="TAIR:AT3G30200"
/db_xref="Araport:AT3G30200"
intron_pos 25:2 (1/11)
intron_pos 49:2 (2/11)
intron_pos 88:0 (3/11)
intron_pos 166:2 (4/11)
intron_pos 209:1 (5/11)
intron_pos 242:0 (6/11)
intron_pos 310:0 (7/11)
intron_pos 341:0 (8/11)
intron_pos 376:1 (9/11)
intron_pos 474:0 (10/11)
intron_pos 504:0 (11/11)
BEGIN
1 MSFVLDKLIG QDASNGHRRR NPWKRLSIVQ EFWFLPASFS SGFRHHHHTV SPIDLATSWR
61 AYRENLQPST VRGIPDVSIN PDPKSVECPL ESLELDLAHY EVPAPTPSAN SYLVYAADNA
121 ENPRSLSASG SFNDSTPKAA QRNSEDSGVT VDGSPSAKVV LCLVAWIMDF TDSETQQPDD
181 LPNLETDYTM PPPLAPECKS FKWKIEVIGQ LSNDVMLLPI NYTDWRLVSP HIKDRAWAVI
241 QSKFRFDDPM MRKDYVMGAL GSRCKDVKLR FWREHKRNNL NETLENRPEK VPEDQWSHLV
301 HLRFTDKWRK MQERNTKNQK NHIMPHLCGR KSFSRKRDEI KIKTGKTPCR VEFFIESRKK
361 HDGSFVSDEA KLRAIALTTL LNLNPQVTYN GTASLDDEYS QVFGPERPGR VHCVGRGPTP
421 SRLVRHSNAT RRKDIENSEL VAQLKTQVKT LGDQVNAMST FLGQILGNST GEQASAWAAN
481 FATAFANIPN PAFVNISNLP NPQERDGGAS
//