LOCUS AEE77490.1 674 aa PRT PLN 23-MAR-2023
DEFINITION Arabidopsis thaliana transmembrane protein, putative (
DUF1216) protein.
ACCESSION CP002686-5393
PROTEIN_ID AEE77490.1
SOURCE Arabidopsis thaliana (thale cress)
ORGANISM Arabidopsis thaliana
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
Pentapetalae; rosids; malvids; Brassicales; Brassicaceae;
Camelineae; Arabidopsis.
REFERENCE 1 (bases 1 to 23459830)
AUTHORS Salanoubat,M., Lemcke,K., Rieger,M., Ansorge,W., Unseld,M.,
Fartmann,B., Valle,G., Blocker,H., Perez-Alonso,M., Obermaier,B.,
Delseny,M., Boutry,M., Grivell,L.A., Mache,R., Puigdomenech,P., De
Simone,V., Choisne,N., Artiguenave,F., Robert,C., Brottier,P.,
Wincker,P., Cattolico,L., Weissenbach,J., Saurin,W., Quetier,F.,
Schafer,M., Muller-Auer,S., Gabel,C., Fuchs,M., Benes,V.,
Wurmbach,E., Drzonek,H., Erfle,H., Jordan,N., Bangert,S.,
Wiedelmann,R., Kranz,H., Voss,H., Holland,R., Brandt,P.,
Nyakatura,G., Vezzi,A., D'Angelo,M., Pallavicini,A., Toppo,S.,
Simionati,B., Conrad,A., Hornischer,K., Kauer,G., Lohnert,T.H.,
Nordsiek,G., Reichelt,J., Scharfe,M., Schon,O., Bargues,M.,
Terol,J., Climent,J., Navarro,P., Collado,C., Perez-Perez,A.,
Ottenwalder,B., Duchemin,D., Cooke,R., Laudie,M., Berger-Llauro,C.,
Purnelle,B., Masuy,D., de Haan,M., Maarse,A.C., Alcaraz,J.P.,
Cottet,A., Casacuberta,E., Monfort,A., Argiriou,A., flores,M.,
Liguori,R., Vitale,D., Mannhaupt,G., Haase,D., Schoof,H., Rudd,S.,
Zaccaria,P., Mewes,H.W., Mayer,K.F., Kaul,S., Town,C.D., Koo,H.L.,
Tallon,L.J., Jenkins,J., Rooney,T., Rizzo,M., Walts,A.,
Utterback,T., Fujii,C.Y., Shea,T.P., Creasy,T.H., Haas,B.,
Maiti,R., Wu,D., Peterson,J., Van Aken,S., Pai,G., Militscher,J.,
Sellers,P., Gill,J.E., Feldblyum,T.V., Preuss,D., Lin,X.,
Nierman,W.C., Salzberg,S.L., White,O., Venter,J.C., Fraser,C.M.,
Kaneko,T., Nakamura,Y., Sato,S., Kato,T., Asamizu,E., Sasamoto,S.,
Kimura,T., Idesawa,K., Kawashima,K., Kishida,Y., Kiyokawa,C.,
Kohara,M., Matsumoto,M., Matsuno,A., Muraki,A., Nakayama,S.,
Nakazaki,N., Shinpo,S., Takeuchi,C., Wada,T., Watanabe,A.,
Yamada,M., Yasuda,M. and Tabata,S.
CONSRTM European Union Chromosome 3 Arabidopsis Sequencing Consortium;
Institute for Genomic Research; Kazusa DNA Research Institute
TITLE Sequence and analysis of chromosome 3 of the plant Arabidopsis
thaliana
JOURNAL Nature 408 (6814), 820-822 (2000)
PUBMED 11130713
REFERENCE 2 (bases 1 to 23459830)
AUTHORS Swarbreck,D., Lamesch,P., Wilks,C. and Huala,E.
CONSRTM TAIR
TITLE Direct Submission
JOURNAL Submitted (18-FEB-2011) Department of Plant Biology, Carnegie
Institution, 260 Panama Street, Stanford, CA, USA
REFERENCE 3 (bases 1 to 23459830)
AUTHORS Krishnakumar,V., Cheng,C.-Y., Chan,A.P., Schobel,S., Kim,M.,
Ferlanti,E.S., Belyaeva,I., Rosen,B.D., Micklem,G., Miller,J.R.,
Vaughn,M. and Town,C.D.
TITLE Direct Submission
JOURNAL Submitted (17-MAY-2016) Plant Genomics, J. Craig Venter Institute,
9704 Medical Center Dr, Rockville, MD 20850, USA
REMARK Protein update by submitter
FEATURES Qualifiers
source /organism="Arabidopsis thaliana"
/mol_type="genomic DNA"
/db_xref="taxon:3702"
/chromosome="3"
/ecotype="Columbia"
protein /locus_tag="AT3G28780"
/inference="Similar to RNA sequence,
EST:INSD:BP838511.1,INSD:AV533246.1,INSD:DR285856.1,
INSD:DR381737.1"
/inference="Similar to RNA sequence, mRNA:INSD:AK175708.1"
/note="Protein of unknown function (DUF1216); FUNCTIONS
IN: molecular_function unknown; INVOLVED IN: pollen exine
formation; LOCATED IN: endomembrane system; EXPRESSED IN:
8 plant structures; EXPRESSED DURING: L mature pollen
stage, M germinated pollen stage, 4 anthesis, petal
differentiation and expansion stage; CONTAINS InterPro
DOMAIN/s: Protein of unknown function DUF1216
(InterPro:IPR009605); BEST Arabidopsis thaliana protein
match is: Protein of unknown function (DUF1216)
(TAIR:AT3G28840.1); Has 491362 Blast hits to 127895
proteins in 3934 species: Archae - 1891; Bacteria -
181160; Metazoa - 101488; Fungi - 34030; Plants - 43823;
Viruses - 7305; Other Eukaryotes - 121665 (source: NCBI
BLink)."
/db_xref="TAIR:AT3G28780"
/db_xref="Araport:AT3G28780"
intron_pos 118:0 (1/1)
BEGIN
1 MARFPIAICL MLILVASSTI YEAQGVFLLR HYMNKFPKNS QDFEPFAYKG MLSFVDNLEN
61 MAPEKGEYKD FFSKLKAFMS FINTAKGSSS EFQSQMKQQA EGLFKAISAL GVKGGSSADT
121 SKLIESLMSM GKTFAEFKRS GATMMTSEQR RELVTSMAKW AQVIGQFVKK VGDQNGDGAK
181 IDLSSLLGGG SSGLGSSGDS GSPGSDSGSP SADTGSPTDG GSYGDTTGDS GSSAGSPSYP
241 SDDGSGSTAG GPSGSTTDGS AGGESSMGGD SSSAGAAGES GSAATADSGD AAGADSGGAA
301 GADSGGAASA DSGGAAAGET ASGGAAAADT SGGSAETGGE SASGGAASGA GAASGASAKT
361 GGESGEAASG GSAETGGESA SAGAASGGSA ETGGESGSGG AASGGESASG GATSGGSPET
421 GGSAETGGES ASGGAASGGE SASGGAASSG SVESGGESTG ATSGGSAETS DESASGGAAS
481 GGESASGGAA SGGSAETGGE STSSGVASGG STGSESASAG AASGGSTEAN GGAAAGGSTE
541 AGSGTSTETS SMGGGSAAAG GVSESSSGGS TAAGGTSESA SGGSATAGGA SGGTYTDSTG
601 GSPTGSPSAG GPSGSASESS MEGGTFGGQS MGGQAGSASY QSTNYQKTHS KSAGKSSVSH
661 SSEEKSSDSA NADS
//