LOCUS AEE77489.1 2081 aa PRT PLN 23-MAR-2023
DEFINITION Arabidopsis thaliana transmembrane protein, putative (
DUF1216) protein.
ACCESSION CP002686-5390
PROTEIN_ID AEE77489.1
SOURCE Arabidopsis thaliana (thale cress)
ORGANISM Arabidopsis thaliana
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
Pentapetalae; rosids; malvids; Brassicales; Brassicaceae;
Camelineae; Arabidopsis.
REFERENCE 1 (bases 1 to 23459830)
AUTHORS Salanoubat,M., Lemcke,K., Rieger,M., Ansorge,W., Unseld,M.,
Fartmann,B., Valle,G., Blocker,H., Perez-Alonso,M., Obermaier,B.,
Delseny,M., Boutry,M., Grivell,L.A., Mache,R., Puigdomenech,P., De
Simone,V., Choisne,N., Artiguenave,F., Robert,C., Brottier,P.,
Wincker,P., Cattolico,L., Weissenbach,J., Saurin,W., Quetier,F.,
Schafer,M., Muller-Auer,S., Gabel,C., Fuchs,M., Benes,V.,
Wurmbach,E., Drzonek,H., Erfle,H., Jordan,N., Bangert,S.,
Wiedelmann,R., Kranz,H., Voss,H., Holland,R., Brandt,P.,
Nyakatura,G., Vezzi,A., D'Angelo,M., Pallavicini,A., Toppo,S.,
Simionati,B., Conrad,A., Hornischer,K., Kauer,G., Lohnert,T.H.,
Nordsiek,G., Reichelt,J., Scharfe,M., Schon,O., Bargues,M.,
Terol,J., Climent,J., Navarro,P., Collado,C., Perez-Perez,A.,
Ottenwalder,B., Duchemin,D., Cooke,R., Laudie,M., Berger-Llauro,C.,
Purnelle,B., Masuy,D., de Haan,M., Maarse,A.C., Alcaraz,J.P.,
Cottet,A., Casacuberta,E., Monfort,A., Argiriou,A., flores,M.,
Liguori,R., Vitale,D., Mannhaupt,G., Haase,D., Schoof,H., Rudd,S.,
Zaccaria,P., Mewes,H.W., Mayer,K.F., Kaul,S., Town,C.D., Koo,H.L.,
Tallon,L.J., Jenkins,J., Rooney,T., Rizzo,M., Walts,A.,
Utterback,T., Fujii,C.Y., Shea,T.P., Creasy,T.H., Haas,B.,
Maiti,R., Wu,D., Peterson,J., Van Aken,S., Pai,G., Militscher,J.,
Sellers,P., Gill,J.E., Feldblyum,T.V., Preuss,D., Lin,X.,
Nierman,W.C., Salzberg,S.L., White,O., Venter,J.C., Fraser,C.M.,
Kaneko,T., Nakamura,Y., Sato,S., Kato,T., Asamizu,E., Sasamoto,S.,
Kimura,T., Idesawa,K., Kawashima,K., Kishida,Y., Kiyokawa,C.,
Kohara,M., Matsumoto,M., Matsuno,A., Muraki,A., Nakayama,S.,
Nakazaki,N., Shinpo,S., Takeuchi,C., Wada,T., Watanabe,A.,
Yamada,M., Yasuda,M. and Tabata,S.
CONSRTM European Union Chromosome 3 Arabidopsis Sequencing Consortium;
Institute for Genomic Research; Kazusa DNA Research Institute
TITLE Sequence and analysis of chromosome 3 of the plant Arabidopsis
thaliana
JOURNAL Nature 408 (6814), 820-822 (2000)
PUBMED 11130713
REFERENCE 2 (bases 1 to 23459830)
AUTHORS Swarbreck,D., Lamesch,P., Wilks,C. and Huala,E.
CONSRTM TAIR
TITLE Direct Submission
JOURNAL Submitted (18-FEB-2011) Department of Plant Biology, Carnegie
Institution, 260 Panama Street, Stanford, CA, USA
REFERENCE 3 (bases 1 to 23459830)
AUTHORS Krishnakumar,V., Cheng,C.-Y., Chan,A.P., Schobel,S., Kim,M.,
Ferlanti,E.S., Belyaeva,I., Rosen,B.D., Micklem,G., Miller,J.R.,
Vaughn,M. and Town,C.D.
TITLE Direct Submission
JOURNAL Submitted (17-MAY-2016) Plant Genomics, J. Craig Venter Institute,
9704 Medical Center Dr, Rockville, MD 20850, USA
REMARK Protein update by submitter
FEATURES Qualifiers
source /organism="Arabidopsis thaliana"
/mol_type="genomic DNA"
/db_xref="taxon:3702"
/chromosome="3"
/ecotype="Columbia"
protein /locus_tag="AT3G28770"
/inference="Similar to RNA sequence, EST:INSD:AV441516.1"
/note="Protein of unknown function (DUF1216); FUNCTIONS
IN: molecular_function unknown; INVOLVED IN:
biological_process unknown; LOCATED IN: endomembrane
system; EXPRESSED IN: petal, leaf whorl, male gametophyte,
flower, epidermis; EXPRESSED DURING: L mature pollen
stage, M germinated pollen stage, 4 anthesis, petal
differentiation and expansion stage; CONTAINS InterPro
DOMAIN/s: Protein of unknown function DUF1216
(InterPro:IPR009605); BEST Arabidopsis thaliana protein
match is: Protein of unknown function (DUF1216)
(TAIR:AT3G28810.1); Has 852843 Blast hits to 124903
proteins in 3296 species: Archae - 3984; Bacteria -
158225; Metazoa - 281358; Fungi - 79908; Plants - 38733;
Viruses - 3887; Other Eukaryotes - 286748 (source: NCBI
BLink)."
/db_xref="TAIR:AT3G28770"
/db_xref="Araport:AT3G28770"
intron_pos 115:0 (1/2)
intron_pos 1961:0 (2/2)
BEGIN
1 MRKVYLFFVC CIVATSLTLN VVLAHETVVN PPNTIKDIEP YISDRALGFV LKLENNCPIR
61 EQLRSFFEKL KDLLKLESSV TPLIEDNEPK TFKFDLKSKS ENLLQTMFML GRGLLSSSIR
121 KEMFEVMKSL TELHAAIGRV IIEKHIKGDE AMSLSLEQKN AVETSITQWE QTITRIVKIV
181 VEVKSKSSSE ASSEESSSTE HNNVTTGSNM VETNGENSES TQEKGDGVEG SNGGDVSMEN
241 LQGNKVEDLK EGNNVVENGE TKENNGENVE SNNEKEVEGQ GESIGDSAIE KNLESKEDVK
301 SEVEAAKNDG SSMTENLGEA QGNNGVSTID NEKEVEGQGE SIEDSDIEKN LESKEDVKSE
361 VEAAKNAGSS MTGKLEEAQR NNGVSTNETM NSENKGSGES TNDKMVNATT NDEDHKKENK
421 EETHENNGES VKGENLENKA GNEESMKGEN LENKVGNEEL KGNASVEAKT NNESSKEEKR
481 EESQRSNEVY MNKETTKGEN VNIQGESIGD STKDNSLENK EDVKPKVDAN ESDGNSTKER
541 HQEAQVNNGV STEDKNLDNI GADEQKKNDK SVEVTTNDGD HTKEKREETQ GNNGESVKNE
601 NLENKEDKKE LKDDESVGAK TNNETSLEEK REQTQKGHDN SINSKIVDNK GGNADSNKEK
661 EVHVGDSTND NNMESKEDTK SEVEVKKNDG SSEKGEEGKE NNKDSMEDKK LENKESQTDS
721 KDDKSVDDKQ EEAQIYGGES KDDKSVEAKG KKKESKENKK TKTNENRVRN KEENVQGNKK
781 ESEKVEKGEK KESKDAKSVE TKDNKKLSST ENRDEAKERS GEDNKEDKEE SKDYQSVEAK
841 EKNENGGVDT NVGNKEDSKD LKDDRSVEVK ANKEESMKKK REEVQRNDKS STKEVRDFAN
901 NMDIDVQKGS GESVKYKKDE KKEGNKEENK DTINTSSKQK GKDKKKKKKE SKNSNMKKKE
961 EDKKEYVNNE LKKQEDNKKE TTKSENSKLK EENKDNKEKK ESEDSASKNR EKKEYEEKKS
1021 KTKEEAKKEK KKSQDKKREE KDSEERKSKK EKEESRDLKA KKKEEETKEK KESENHKSKK
1081 KEDKKEHEDN KSMKKEEDKK EKKKHEESKS RKKEEDKKDM EKLEDQNSNK KKEDKNEKKK
1141 SQHVKLVKKE SDKKEKKENE EKSETKEIES SKSQKNEVDK KEKKSSKDQQ KKKEKEMKES
1201 EEKKLKKNEE DRKKQTSVEE NKKQKETKKE KNKPKDDKKN TTKQSGGKKE SMESESKEAE
1261 NQQKSQATTQ ADSDESKNEI LMQADSQADS HSDSQADSDE SKNEILMQAD SQATTQRNNE
1321 EDRKKQTSVA ENKKQKETKE EKNKPKDDKK NTTKQSGGKK ESMESESKEA ENQQKSQATT
1381 QADSDESKNE ILMQADSQAD SHSDSQADSD ESKNEILMQA DSQATTQRNN EEDRKKQTSV
1441 AENKKQKETK EEKNKPKDDK KNTTEQSGGK KESMESESKE AENQQKSQAT TQGESDESKN
1501 EILMQADSQA DTHANSQGDS DESKNEILMQ ADSQADSQTD SDESKNEILM QADSQADSQT
1561 DSDESKNEIL MQADSQAKIG ESLEDNKVKG KEDNGDEVGK ENSKTIEVKG RHEESKDGKT
1621 NENGGKEVST EEGSKDSNIV ERNGGKEDSI KEGSEDGKTV EINGGEELST EEGSKDGKIE
1681 EGKEGKENST KEGSKDDKIE EGMEGKENST KESSKDGKIN EIHGDKEATM EEGSKDGGTN
1741 STGKDSKDSK SVEINGVKDD SLKDDSKNGD INEINNGKED SVKDNVTEIQ GNDNSLTNST
1801 SSEPNGDKLD TNKDSMKNNT MEAQGGSNGD STNGETEETK ESNVSMNNQN MQDVGSNENS
1861 MNNQTTGTGD DIISTTTDTE SNTSKEVTSF ISNLEEKSPG TQEFQSFFQK LKDYMKYLCP
1921 VSSTFEAKDS RSYMSEMISM ATKLSDAMAV LQAKKSGSGQ MKTTLQGYQQ EVMKTLTILQ
1981 SVMGKAVTEQ QSKDSGSLTL TLSQQQAIKE IVLKWEQVMS QFVKIATESE KQFSLEISTE
2041 NGYHMKKSYN SSSSSSSSSS SSSRSDLKLN GEHLKGMGMN G
//