LOCUS AEE77471.1 504 aa PRT PLN 23-MAR-2023
DEFINITION Arabidopsis thaliana Tetratricopeptide repeat (TPR)-like
superfamily protein protein.
ACCESSION CP002686-5368
PROTEIN_ID AEE77471.1
SOURCE Arabidopsis thaliana (thale cress)
ORGANISM Arabidopsis thaliana
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
Pentapetalae; rosids; malvids; Brassicales; Brassicaceae;
Camelineae; Arabidopsis.
REFERENCE 1 (bases 1 to 23459830)
AUTHORS Salanoubat,M., Lemcke,K., Rieger,M., Ansorge,W., Unseld,M.,
Fartmann,B., Valle,G., Blocker,H., Perez-Alonso,M., Obermaier,B.,
Delseny,M., Boutry,M., Grivell,L.A., Mache,R., Puigdomenech,P., De
Simone,V., Choisne,N., Artiguenave,F., Robert,C., Brottier,P.,
Wincker,P., Cattolico,L., Weissenbach,J., Saurin,W., Quetier,F.,
Schafer,M., Muller-Auer,S., Gabel,C., Fuchs,M., Benes,V.,
Wurmbach,E., Drzonek,H., Erfle,H., Jordan,N., Bangert,S.,
Wiedelmann,R., Kranz,H., Voss,H., Holland,R., Brandt,P.,
Nyakatura,G., Vezzi,A., D'Angelo,M., Pallavicini,A., Toppo,S.,
Simionati,B., Conrad,A., Hornischer,K., Kauer,G., Lohnert,T.H.,
Nordsiek,G., Reichelt,J., Scharfe,M., Schon,O., Bargues,M.,
Terol,J., Climent,J., Navarro,P., Collado,C., Perez-Perez,A.,
Ottenwalder,B., Duchemin,D., Cooke,R., Laudie,M., Berger-Llauro,C.,
Purnelle,B., Masuy,D., de Haan,M., Maarse,A.C., Alcaraz,J.P.,
Cottet,A., Casacuberta,E., Monfort,A., Argiriou,A., flores,M.,
Liguori,R., Vitale,D., Mannhaupt,G., Haase,D., Schoof,H., Rudd,S.,
Zaccaria,P., Mewes,H.W., Mayer,K.F., Kaul,S., Town,C.D., Koo,H.L.,
Tallon,L.J., Jenkins,J., Rooney,T., Rizzo,M., Walts,A.,
Utterback,T., Fujii,C.Y., Shea,T.P., Creasy,T.H., Haas,B.,
Maiti,R., Wu,D., Peterson,J., Van Aken,S., Pai,G., Militscher,J.,
Sellers,P., Gill,J.E., Feldblyum,T.V., Preuss,D., Lin,X.,
Nierman,W.C., Salzberg,S.L., White,O., Venter,J.C., Fraser,C.M.,
Kaneko,T., Nakamura,Y., Sato,S., Kato,T., Asamizu,E., Sasamoto,S.,
Kimura,T., Idesawa,K., Kawashima,K., Kishida,Y., Kiyokawa,C.,
Kohara,M., Matsumoto,M., Matsuno,A., Muraki,A., Nakayama,S.,
Nakazaki,N., Shinpo,S., Takeuchi,C., Wada,T., Watanabe,A.,
Yamada,M., Yasuda,M. and Tabata,S.
CONSRTM European Union Chromosome 3 Arabidopsis Sequencing Consortium;
Institute for Genomic Research; Kazusa DNA Research Institute
TITLE Sequence and analysis of chromosome 3 of the plant Arabidopsis
thaliana
JOURNAL Nature 408 (6814), 820-822 (2000)
PUBMED 11130713
REFERENCE 2 (bases 1 to 23459830)
AUTHORS Swarbreck,D., Lamesch,P., Wilks,C. and Huala,E.
CONSRTM TAIR
TITLE Direct Submission
JOURNAL Submitted (18-FEB-2011) Department of Plant Biology, Carnegie
Institution, 260 Panama Street, Stanford, CA, USA
REFERENCE 3 (bases 1 to 23459830)
AUTHORS Krishnakumar,V., Cheng,C.-Y., Chan,A.P., Schobel,S., Kim,M.,
Ferlanti,E.S., Belyaeva,I., Rosen,B.D., Micklem,G., Miller,J.R.,
Vaughn,M. and Town,C.D.
TITLE Direct Submission
JOURNAL Submitted (17-MAY-2016) Plant Genomics, J. Craig Venter Institute,
9704 Medical Center Dr, Rockville, MD 20850, USA
REMARK Protein update by submitter
FEATURES Qualifiers
source /organism="Arabidopsis thaliana"
/mol_type="genomic DNA"
/db_xref="taxon:3702"
/chromosome="3"
/ecotype="Columbia"
protein /locus_tag="AT3G28660"
/inference="Similar to RNA sequence,
EST:INSD:EL988986.1,INSD:ES104128.1,INSD:AV829924.1,
INSD:AV809286.1,INSD:EL265560.1,INSD:ES137425.1,
INSD:BP780082.1,INSD:ES118154.1,INSD:ES077718.1,
INSD:ES158121.1,INSD:ES078602.1,INSD:ES099010.1,
INSD:EL227431.1,INSD:BX835323.1,INSD:ES152075.1"
/inference="Similar to RNA sequence,
mRNA:INSD:BT000982.1,INSD:AY091065.1"
/note="Tetratricopeptide repeat (TPR)-like superfamily
protein; CONTAINS InterPro DOMAIN/s: Pentatricopeptide
repeat (InterPro:IPR002885); BEST Arabidopsis thaliana
protein match is: Tetratricopeptide repeat (TPR)-like
superfamily protein (TAIR:AT3G28640.1); Has 30916 Blast
hits to 12747 proteins in 210 species: Archae - 0;
Bacteria - 2; Metazoa - 48; Fungi - 39; Plants - 30416;
Viruses - 0; Other Eukaryotes - 411 (source: NCBI BLink)."
/db_xref="TAIR:AT3G28660"
/db_xref="Araport:AT3G28660"
BEGIN
1 MSVVSSFHQS WKSLILASQR CNTVKQIKST HSLFIIHGLH RNTYAISKLL TAFLHLPNLN
61 KHFHYASSIF DSIEIPNSFV YDTMIRICSR SSQPHLGLRY FLLMVKEEEE DITPSYLTFH
121 FLIVACLKAC FFSVGKQIHC WVVKNGVFLS DGHVQTGVLR IYVEDKLLFD ARKVFDEIPQ
181 PDVVKWDVLM NGYVRCGLGS EGLEVFKEML VRGIEPDEFS VTTALTACAQ VGALAQGKWI
241 HEFVKKKRWI ESDVFVGTAL VDMYAKCGCI ETAVEVFEKL TRRNVFSWAA LIGGYAAYGY
301 AKKATTCLDR IEREDGIKPD SVVLLGVLAA CAHGGFLEEG RTMLENMEAR YGITPKHEHY
361 SCIVDLMCRA GRLDDALDLI EKMPMKPLAS VWGALLNGCR THKNVELGEL AVQNLLDLEK
421 GNVEEEEAAL VQLSNIYFSV QRNPEAFKVR GMIEQRGIRK TPGWSLLEVD GIVTKFVSGD
481 VSHPNLLQIH TLIHLLSVDA SQIL
//