LOCUS AEE77437.1 1228 aa PRT PLN 23-MAR-2023
DEFINITION Arabidopsis thaliana P-glycoprotein 16 protein.
ACCESSION CP002686-5323
PROTEIN_ID AEE77437.1
SOURCE Arabidopsis thaliana (thale cress)
ORGANISM Arabidopsis thaliana
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
Pentapetalae; rosids; malvids; Brassicales; Brassicaceae;
Camelineae; Arabidopsis.
REFERENCE 1 (bases 1 to 23459830)
AUTHORS Salanoubat,M., Lemcke,K., Rieger,M., Ansorge,W., Unseld,M.,
Fartmann,B., Valle,G., Blocker,H., Perez-Alonso,M., Obermaier,B.,
Delseny,M., Boutry,M., Grivell,L.A., Mache,R., Puigdomenech,P., De
Simone,V., Choisne,N., Artiguenave,F., Robert,C., Brottier,P.,
Wincker,P., Cattolico,L., Weissenbach,J., Saurin,W., Quetier,F.,
Schafer,M., Muller-Auer,S., Gabel,C., Fuchs,M., Benes,V.,
Wurmbach,E., Drzonek,H., Erfle,H., Jordan,N., Bangert,S.,
Wiedelmann,R., Kranz,H., Voss,H., Holland,R., Brandt,P.,
Nyakatura,G., Vezzi,A., D'Angelo,M., Pallavicini,A., Toppo,S.,
Simionati,B., Conrad,A., Hornischer,K., Kauer,G., Lohnert,T.H.,
Nordsiek,G., Reichelt,J., Scharfe,M., Schon,O., Bargues,M.,
Terol,J., Climent,J., Navarro,P., Collado,C., Perez-Perez,A.,
Ottenwalder,B., Duchemin,D., Cooke,R., Laudie,M., Berger-Llauro,C.,
Purnelle,B., Masuy,D., de Haan,M., Maarse,A.C., Alcaraz,J.P.,
Cottet,A., Casacuberta,E., Monfort,A., Argiriou,A., flores,M.,
Liguori,R., Vitale,D., Mannhaupt,G., Haase,D., Schoof,H., Rudd,S.,
Zaccaria,P., Mewes,H.W., Mayer,K.F., Kaul,S., Town,C.D., Koo,H.L.,
Tallon,L.J., Jenkins,J., Rooney,T., Rizzo,M., Walts,A.,
Utterback,T., Fujii,C.Y., Shea,T.P., Creasy,T.H., Haas,B.,
Maiti,R., Wu,D., Peterson,J., Van Aken,S., Pai,G., Militscher,J.,
Sellers,P., Gill,J.E., Feldblyum,T.V., Preuss,D., Lin,X.,
Nierman,W.C., Salzberg,S.L., White,O., Venter,J.C., Fraser,C.M.,
Kaneko,T., Nakamura,Y., Sato,S., Kato,T., Asamizu,E., Sasamoto,S.,
Kimura,T., Idesawa,K., Kawashima,K., Kishida,Y., Kiyokawa,C.,
Kohara,M., Matsumoto,M., Matsuno,A., Muraki,A., Nakayama,S.,
Nakazaki,N., Shinpo,S., Takeuchi,C., Wada,T., Watanabe,A.,
Yamada,M., Yasuda,M. and Tabata,S.
CONSRTM European Union Chromosome 3 Arabidopsis Sequencing Consortium;
Institute for Genomic Research; Kazusa DNA Research Institute
TITLE Sequence and analysis of chromosome 3 of the plant Arabidopsis
thaliana
JOURNAL Nature 408 (6814), 820-822 (2000)
PUBMED 11130713
REFERENCE 2 (bases 1 to 23459830)
AUTHORS Swarbreck,D., Lamesch,P., Wilks,C. and Huala,E.
CONSRTM TAIR
TITLE Direct Submission
JOURNAL Submitted (18-FEB-2011) Department of Plant Biology, Carnegie
Institution, 260 Panama Street, Stanford, CA, USA
REFERENCE 3 (bases 1 to 23459830)
AUTHORS Krishnakumar,V., Cheng,C.-Y., Chan,A.P., Schobel,S., Kim,M.,
Ferlanti,E.S., Belyaeva,I., Rosen,B.D., Micklem,G., Miller,J.R.,
Vaughn,M. and Town,C.D.
TITLE Direct Submission
JOURNAL Submitted (17-MAY-2016) Plant Genomics, J. Craig Venter Institute,
9704 Medical Center Dr, Rockville, MD 20850, USA
REMARK Protein update by submitter
FEATURES Qualifiers
source /organism="Arabidopsis thaliana"
/mol_type="genomic DNA"
/db_xref="taxon:3702"
/chromosome="3"
/ecotype="Columbia"
protein /gene="ABCB16"
/locus_tag="AT3G28360"
/gene_synonym="ATP-binding cassette B16"
/gene_synonym="P-glycoprotein 16"
/gene_synonym="PGP16"
/inference="Similar to RNA sequence,
EST:INSD:AV830055.1,INSD:BX836327.1,INSD:BX840405.1,
INSD:AV809831.1"
/inference="Similar to RNA sequence,
mRNA:INSD:BT008368.1,INSD:AY081330.1"
/note="P-glycoprotein 16 (PGP16); FUNCTIONS IN: ATPase
activity, coupled to transmembrane movement of substances;
INVOLVED IN: transport, transmembrane transport; LOCATED
IN: integral to membrane; EXPRESSED IN: flower; EXPRESSED
DURING: petal differentiation and expansion stage;
CONTAINS InterPro DOMAIN/s: ATPase, AAA+ type, core
(InterPro:IPR003593), ABC transporter-like
(InterPro:IPR003439), ABC transporter, transmembrane
domain, type 1 (InterPro:IPR011527), ABC transporter
integral membrane type 1 (InterPro:IPR017940), ABC
transporter, transmembrane domain (InterPro:IPR001140),
ABC transporter, conserved site (InterPro:IPR017871); BEST
Arabidopsis thaliana protein match is: P-glycoprotein 18
(TAIR:AT3G28390.1); Has 804178 Blast hits to 382236
proteins in 4142 species: Archae - 14262; Bacteria -
629589; Metazoa - 17108; Fungi - 11354; Plants - 9006;
Viruses - 43; Other Eukaryotes - 122816 (source: NCBI
BLink)."
/db_xref="TAIR:AT3G28360"
/db_xref="Araport:AT3G28360"
intron_pos 67:0 (1/6)
intron_pos 85:1 (2/6)
intron_pos 145:0 (3/6)
intron_pos 297:2 (4/6)
intron_pos 478:0 (5/6)
intron_pos 771:0 (6/6)
BEGIN
1 MKTWGSMRSI FMHADGVDWM LMGLGLIGAV GDGFITPILF FITAMLLNDF GSFSFNDETF
61 MQPISKNALA MLYVACASWV ICFLEGYCWT RTGERQAAKM RERYLRAVLR QDVGYFDLHV
121 TSTSDIITSV SSDSLVIQDF LSEKLPNILM NASAFVGSYI VGFMLLWRLT IVGFPFIILL
181 LIPGLMYGRA LIGISRKIRE EYNEAGSIAE QAISSVRTVY AFVSEKKMIE KFSDALQGSV
241 KLGLRQGLAK GIAIGSNGIV YAIWGFLTWY GSRMVMNYGY KGGTVSTVTV CVTFGGTALG
301 QALSNLKYFS EAFVAGERIQ KMIKRVPDID SDNLNGHILE TIRGEVEFNN VKCKYPSRPE
361 TLIFDDLCLK IPSGKTVALV GGSGSGKSTV ISLLQRFYDP NEGDILIDSV SINNMQVKWL
421 RSQMGMVSQE PSLFATSIKE NILFGKEDAS FDEVVEAAKA SNAHNFISQF PHGYQTQVGE
481 RGVHMSGGQK QRIAIARALI KSPIILLLDE ATSALDLESE RVVQEALDNA SVGRTTIVIA
541 HRLSTIRNAD IICVLHNGCI VETGSHDKLM EIDGKYTSLV RLQQMKNEES CDNTSVGVKE
601 GRVSSLRNDL DYNPRDLAHS MSSSIVTNLS DSIPQDKKPL VPSFKRLMAM NRPEWKHALC
661 GCLSASLGGA VQPIYAYSSG LMISVFFLTN HEQIKENTRI YVLLFFGLAL FTFFTSISQQ
721 YSFSYMGEYL TKRIREQMLS KILTFEVNWF DEEENSSGAI CSRLAKDANV VRSLVGERMS
781 LLVQTISTVM VACTIGLVIA WRFTIVMISV QPVIIVCYYI QRVLLKNMSK KAIIAQDESS
841 KLAAEAVSNI RTITTFSSQE RIMKLLERVQ EGPRRESARQ SWLAGIMLGT TQSLITCTSA
901 LNFWYGGKLI ADGKMVSKAF FELFLIFKTT GRAIAEAGTM TTDLAKGSNS VDSVFTVLDR
961 RTTIEPENPD GYILEKIKGQ ITFLNVDFAY PTRPNMVIFN NFSIEIHEGK STAIVGPSRS
1021 GKSTVIGLIE RFYDPLQGIV KIDGRDIRSY HLRSLRQHMS LVSQEPTLFA GTIRENIMYG
1081 RASNKIDESE IIEAGKTANA HEFITSLSDG YDTYCGDRGV QLSGGQKQRI AIARTILKNP
1141 SILLLDEATS ALDSQSERVV QDALEHVMVG KTSVVIAHRL STIQNCDTIA VLDKGKVVES
1201 GTHASLLAKG PTGSYFSLVS LQRKVRYV
//