LOCUS AEE77357.1 1133 aa PRT PLN 23-MAR-2023
DEFINITION Arabidopsis thaliana DNA helicase ROCK-N-ROLLERS protein.
ACCESSION CP002686-5212
PROTEIN_ID AEE77357.1
SOURCE Arabidopsis thaliana (thale cress)
ORGANISM Arabidopsis thaliana
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
Pentapetalae; rosids; malvids; Brassicales; Brassicaceae;
Camelineae; Arabidopsis.
REFERENCE 1 (bases 1 to 23459830)
AUTHORS Salanoubat,M., Lemcke,K., Rieger,M., Ansorge,W., Unseld,M.,
Fartmann,B., Valle,G., Blocker,H., Perez-Alonso,M., Obermaier,B.,
Delseny,M., Boutry,M., Grivell,L.A., Mache,R., Puigdomenech,P., De
Simone,V., Choisne,N., Artiguenave,F., Robert,C., Brottier,P.,
Wincker,P., Cattolico,L., Weissenbach,J., Saurin,W., Quetier,F.,
Schafer,M., Muller-Auer,S., Gabel,C., Fuchs,M., Benes,V.,
Wurmbach,E., Drzonek,H., Erfle,H., Jordan,N., Bangert,S.,
Wiedelmann,R., Kranz,H., Voss,H., Holland,R., Brandt,P.,
Nyakatura,G., Vezzi,A., D'Angelo,M., Pallavicini,A., Toppo,S.,
Simionati,B., Conrad,A., Hornischer,K., Kauer,G., Lohnert,T.H.,
Nordsiek,G., Reichelt,J., Scharfe,M., Schon,O., Bargues,M.,
Terol,J., Climent,J., Navarro,P., Collado,C., Perez-Perez,A.,
Ottenwalder,B., Duchemin,D., Cooke,R., Laudie,M., Berger-Llauro,C.,
Purnelle,B., Masuy,D., de Haan,M., Maarse,A.C., Alcaraz,J.P.,
Cottet,A., Casacuberta,E., Monfort,A., Argiriou,A., flores,M.,
Liguori,R., Vitale,D., Mannhaupt,G., Haase,D., Schoof,H., Rudd,S.,
Zaccaria,P., Mewes,H.W., Mayer,K.F., Kaul,S., Town,C.D., Koo,H.L.,
Tallon,L.J., Jenkins,J., Rooney,T., Rizzo,M., Walts,A.,
Utterback,T., Fujii,C.Y., Shea,T.P., Creasy,T.H., Haas,B.,
Maiti,R., Wu,D., Peterson,J., Van Aken,S., Pai,G., Militscher,J.,
Sellers,P., Gill,J.E., Feldblyum,T.V., Preuss,D., Lin,X.,
Nierman,W.C., Salzberg,S.L., White,O., Venter,J.C., Fraser,C.M.,
Kaneko,T., Nakamura,Y., Sato,S., Kato,T., Asamizu,E., Sasamoto,S.,
Kimura,T., Idesawa,K., Kawashima,K., Kishida,Y., Kiyokawa,C.,
Kohara,M., Matsumoto,M., Matsuno,A., Muraki,A., Nakayama,S.,
Nakazaki,N., Shinpo,S., Takeuchi,C., Wada,T., Watanabe,A.,
Yamada,M., Yasuda,M. and Tabata,S.
CONSRTM European Union Chromosome 3 Arabidopsis Sequencing Consortium;
Institute for Genomic Research; Kazusa DNA Research Institute
TITLE Sequence and analysis of chromosome 3 of the plant Arabidopsis
thaliana
JOURNAL Nature 408 (6814), 820-822 (2000)
PUBMED 11130713
REFERENCE 2 (bases 1 to 23459830)
AUTHORS Swarbreck,D., Lamesch,P., Wilks,C. and Huala,E.
CONSRTM TAIR
TITLE Direct Submission
JOURNAL Submitted (18-FEB-2011) Department of Plant Biology, Carnegie
Institution, 260 Panama Street, Stanford, CA, USA
REFERENCE 3 (bases 1 to 23459830)
AUTHORS Krishnakumar,V., Cheng,C.-Y., Chan,A.P., Schobel,S., Kim,M.,
Ferlanti,E.S., Belyaeva,I., Rosen,B.D., Micklem,G., Miller,J.R.,
Vaughn,M. and Town,C.D.
TITLE Direct Submission
JOURNAL Submitted (17-MAY-2016) Plant Genomics, J. Craig Venter Institute,
9704 Medical Center Dr, Rockville, MD 20850, USA
REMARK Protein update by submitter
FEATURES Qualifiers
source /organism="Arabidopsis thaliana"
/mol_type="genomic DNA"
/db_xref="taxon:3702"
/chromosome="3"
/ecotype="Columbia"
protein /gene="RCK"
/locus_tag="AT3G27730"
/gene_synonym="MER3"
/gene_synonym="ROCK-N-ROLLERS"
/inference="Similar to RNA sequence,
mRNA:INSD:AY822649.1,INSD:AY960701.1"
/note="ROCK-N-ROLLERS (RCK); CONTAINS InterPro DOMAIN/s:
ATPase, AAA+ type, core (InterPro:IPR003593), DNA/RNA
helicase, DEAD/DEAH box type, N-terminal
(InterPro:IPR011545), Sec63 domain (InterPro:IPR004179),
DEAD-like helicase, N-terminal (InterPro:IPR014001),
DNA/RNA helicase, C-terminal (InterPro:IPR001650),
Helicase, superfamily 1/2, ATP-binding domain
(InterPro:IPR014021); BEST Arabidopsis thaliana protein
match is: U5 small nuclear ribonucleoprotein helicase
(TAIR:AT5G61140.2); Has 10425 Blast hits to 9108 proteins
in 1594 species: Archae - 861; Bacteria - 4193; Metazoa -
1363; Fungi - 1417; Plants - 555; Viruses - 24; Other
Eukaryotes - 2012 (source: NCBI BLink)."
/db_xref="TAIR:AT3G27730"
/db_xref="Araport:AT3G27730"
intron_pos 23:2 (1/26)
intron_pos 85:0 (2/26)
intron_pos 139:0 (3/26)
intron_pos 218:1 (4/26)
intron_pos 230:2 (5/26)
intron_pos 246:1 (6/26)
intron_pos 259:0 (7/26)
intron_pos 266:1 (8/26)
intron_pos 337:1 (9/26)
intron_pos 389:2 (10/26)
intron_pos 407:0 (11/26)
intron_pos 431:0 (12/26)
intron_pos 447:2 (13/26)
intron_pos 487:0 (14/26)
intron_pos 508:1 (15/26)
intron_pos 536:1 (16/26)
intron_pos 578:1 (17/26)
intron_pos 644:0 (18/26)
intron_pos 707:0 (19/26)
intron_pos 791:0 (20/26)
intron_pos 807:2 (21/26)
intron_pos 813:2 (22/26)
intron_pos 842:1 (23/26)
intron_pos 901:2 (24/26)
intron_pos 914:1 (25/26)
intron_pos 1016:1 (26/26)
BEGIN
1 MDTHTLKSVS DLPGNFRSAF SFRYFNSLQS ECFPLCFHSD INMIISAPTG SGKTVLFELC
61 ILRLFSKSIS KEGSFLHAKG ALKTVYISPS KALVQEKLRD WNQKFNSWGI SCLELTGDNE
121 TYSTKNIQDA DIILTTPEKF DAVSRYRVTS GGLGFFSDIA LVLIDEVHLL NDPRGAALEA
181 IVSRLKILSS NHELRSSTLA SVRLLAVSAT IPNIEDLAEW LKVPTAGIKR FGEEMRPVKL
241 TTKVFGYAAA KNDFLFEKRL QNYIYDILMQ YSKGKSALVF CSTRKGAQEA AQKLAQTAMT
301 YGYSNPFIKS REQLERLREA SPMCSDKQMQ SYILQGVGYH NGGLCQKDRS LVEGLFLNGD
361 IQVICTTNTL AHGINLPAHT VVIKSTQHFN KEKGHYMEYD RSTLLQMSGR AGRPPFDDTG
421 MVIIMTRRET VHLYENLLNG CEVVESQLLP CLIEHLTAEI VQLTISDITR AIEWMKCSYL
481 YVRMKKNPEN YAIKKGIPKD RVEKHLQELC LQKINELSQY QMIWTDTDGF VLKPEEPGRL
541 MTKYYLKFET MKYIINTPTS YSLDEALHIV CHAEEISWIQ LRRNEKKTLN DVNADKEGRL
601 RFHINDNKGK RKKRIQTREE KLFVLANDWL TGDPSVHDLS MTQDANSICS NGSRIARCMK
661 EYFIYKKNYK GTLSSTLLAK SLYQKLWDDS PYLLKQLPGI GMVTAKALHS MGVRSFEALA
721 EADPRRIEIV TGRKYPFGNT IKESLSSLPP KVEIKVEEVD CQKQGISKLA VTLSRVSQPL
781 QSTKRHYADL IVGSEEENLI HFHEKIRMED FSSPYSVTVL LERPHQQTKV TVKADLIFEE
841 YIGIDLHETL LLKKANNNKV NYKSENRMPQ YYPPMASACI ADDDNPVTSG PSNRKDKKDD
901 MPSFKLIDDD SEEEKEPYVT MEEDDCVIIN EHTVFDHIRE KAKCFPSLNP LNPTSSPASG
961 KSILKRKSLV ENNSPELDPL FQYDSVFDLP TNTKDIKQSA QQITSPGYAS FAEKTETERP
1021 FSDETIFNYI RKRSKNSPAL ATSKIENPIT ISSQEGRNAE ISPYRTYGLL VSPATKIPRI
1081 TSDAPSEILS FDISMVKRSD TSLEQTKGFC STLAGKSNVS DSFLGFKSIF SFL
//