LOCUS AEE77323.1 269 aa PRT PLN 23-MAR-2023
DEFINITION Arabidopsis thaliana SGF29 tudor-like domain-containing
protein protein.
ACCESSION CP002686-5142
PROTEIN_ID AEE77323.1
SOURCE Arabidopsis thaliana (thale cress)
ORGANISM Arabidopsis thaliana
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
Pentapetalae; rosids; malvids; Brassicales; Brassicaceae;
Camelineae; Arabidopsis.
REFERENCE 1 (bases 1 to 23459830)
AUTHORS Salanoubat,M., Lemcke,K., Rieger,M., Ansorge,W., Unseld,M.,
Fartmann,B., Valle,G., Blocker,H., Perez-Alonso,M., Obermaier,B.,
Delseny,M., Boutry,M., Grivell,L.A., Mache,R., Puigdomenech,P., De
Simone,V., Choisne,N., Artiguenave,F., Robert,C., Brottier,P.,
Wincker,P., Cattolico,L., Weissenbach,J., Saurin,W., Quetier,F.,
Schafer,M., Muller-Auer,S., Gabel,C., Fuchs,M., Benes,V.,
Wurmbach,E., Drzonek,H., Erfle,H., Jordan,N., Bangert,S.,
Wiedelmann,R., Kranz,H., Voss,H., Holland,R., Brandt,P.,
Nyakatura,G., Vezzi,A., D'Angelo,M., Pallavicini,A., Toppo,S.,
Simionati,B., Conrad,A., Hornischer,K., Kauer,G., Lohnert,T.H.,
Nordsiek,G., Reichelt,J., Scharfe,M., Schon,O., Bargues,M.,
Terol,J., Climent,J., Navarro,P., Collado,C., Perez-Perez,A.,
Ottenwalder,B., Duchemin,D., Cooke,R., Laudie,M., Berger-Llauro,C.,
Purnelle,B., Masuy,D., de Haan,M., Maarse,A.C., Alcaraz,J.P.,
Cottet,A., Casacuberta,E., Monfort,A., Argiriou,A., flores,M.,
Liguori,R., Vitale,D., Mannhaupt,G., Haase,D., Schoof,H., Rudd,S.,
Zaccaria,P., Mewes,H.W., Mayer,K.F., Kaul,S., Town,C.D., Koo,H.L.,
Tallon,L.J., Jenkins,J., Rooney,T., Rizzo,M., Walts,A.,
Utterback,T., Fujii,C.Y., Shea,T.P., Creasy,T.H., Haas,B.,
Maiti,R., Wu,D., Peterson,J., Van Aken,S., Pai,G., Militscher,J.,
Sellers,P., Gill,J.E., Feldblyum,T.V., Preuss,D., Lin,X.,
Nierman,W.C., Salzberg,S.L., White,O., Venter,J.C., Fraser,C.M.,
Kaneko,T., Nakamura,Y., Sato,S., Kato,T., Asamizu,E., Sasamoto,S.,
Kimura,T., Idesawa,K., Kawashima,K., Kishida,Y., Kiyokawa,C.,
Kohara,M., Matsumoto,M., Matsuno,A., Muraki,A., Nakayama,S.,
Nakazaki,N., Shinpo,S., Takeuchi,C., Wada,T., Watanabe,A.,
Yamada,M., Yasuda,M. and Tabata,S.
CONSRTM European Union Chromosome 3 Arabidopsis Sequencing Consortium;
Institute for Genomic Research; Kazusa DNA Research Institute
TITLE Sequence and analysis of chromosome 3 of the plant Arabidopsis
thaliana
JOURNAL Nature 408 (6814), 820-822 (2000)
PUBMED 11130713
REFERENCE 2 (bases 1 to 23459830)
AUTHORS Swarbreck,D., Lamesch,P., Wilks,C. and Huala,E.
CONSRTM TAIR
TITLE Direct Submission
JOURNAL Submitted (18-FEB-2011) Department of Plant Biology, Carnegie
Institution, 260 Panama Street, Stanford, CA, USA
REFERENCE 3 (bases 1 to 23459830)
AUTHORS Krishnakumar,V., Cheng,C.-Y., Chan,A.P., Schobel,S., Kim,M.,
Ferlanti,E.S., Belyaeva,I., Rosen,B.D., Micklem,G., Miller,J.R.,
Vaughn,M. and Town,C.D.
TITLE Direct Submission
JOURNAL Submitted (17-MAY-2016) Plant Genomics, J. Craig Venter Institute,
9704 Medical Center Dr, Rockville, MD 20850, USA
REMARK Protein update by submitter
FEATURES Qualifiers
source /organism="Arabidopsis thaliana"
/mol_type="genomic DNA"
/db_xref="taxon:3702"
/chromosome="3"
/ecotype="Columbia"
protein /gene="SGF29a"
/locus_tag="AT3G27460"
/gene_synonym="AtSGF29a"
/gene_synonym="SaGa associated Factor 29 a"
/inference="Similar to RNA sequence,
EST:INSD:DR348321.1,INSD:AV786442.1,INSD:EH977986.1,
INSD:EL183257.1,INSD:ES040587.1,INSD:AV824510.1,
INSD:DR381870.1,INSD:EH926208.1,INSD:ES210583.1,
INSD:EL155461.1,INSD:ES102869.1,INSD:EL995177.1,
INSD:ES115224.1,INSD:EL033426.1,INSD:ES122610.1,
INSD:DR348320.1,INSD:ES061413.1,INSD:ES034404.1"
/note="SGF29 tudor-like domain; FUNCTIONS IN:
molecular_function unknown; INVOLVED IN:
biological_process unknown; LOCATED IN: nucleus; CONTAINS
InterPro DOMAIN/s: SAGA-associated factor 29
(InterPro:IPR010750); BEST Arabidopsis thaliana protein
match is: SGF29 tudor-like domain (TAIR:AT5G40550.2); Has
324 Blast hits to 324 proteins in 148 species: Archae - 0;
Bacteria - 0; Metazoa - 122; Fungi - 113; Plants - 51;
Viruses - 0; Other Eukaryotes - 38 (source: NCBI BLink)."
/db_xref="TAIR:AT3G27460"
/db_xref="Araport:AT3G27460"
intron_pos 41:1 (1/8)
intron_pos 72:2 (2/8)
intron_pos 98:1 (3/8)
intron_pos 134:0 (4/8)
intron_pos 162:2 (5/8)
intron_pos 180:2 (6/8)
intron_pos 232:0 (7/8)
intron_pos 236:2 (8/8)
BEGIN
1 MSSSPDIAGI LDNTKELDRL RKEQEEVLVE INKMHKKLQA TPEIVEKPGD ISLSKLKNLY
61 IQAKELSESE VTVSNILLTQ LDSLLPSGPT GQQRRKLGNE QKRKRMKVDT DVTRVSPSMR
121 NQIEAYASLK GEQVAARVTA EDAEKDEWFV VKVIHFDRET KEVEVLDEEP GDDEEGGGQR
181 TYKLSMSCIL PFPKRNDPSS TQEFIPGKHV LAVYPGTTAL YKATVISTPR KRKSDEYLLE
241 FDDDEEDGAL PQRTVPFHKV VALPEGHRQ
//