LOCUS AEE77318.1 267 aa PRT PLN 23-MAR-2023
DEFINITION Arabidopsis thaliana N-terminal nucleophile aminohydrolases
(Ntn hydrolases) superfamily protein protein.
ACCESSION CP002686-5138
PROTEIN_ID AEE77318.1
SOURCE Arabidopsis thaliana (thale cress)
ORGANISM Arabidopsis thaliana
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
Pentapetalae; rosids; malvids; Brassicales; Brassicaceae;
Camelineae; Arabidopsis.
REFERENCE 1 (bases 1 to 23459830)
AUTHORS Salanoubat,M., Lemcke,K., Rieger,M., Ansorge,W., Unseld,M.,
Fartmann,B., Valle,G., Blocker,H., Perez-Alonso,M., Obermaier,B.,
Delseny,M., Boutry,M., Grivell,L.A., Mache,R., Puigdomenech,P., De
Simone,V., Choisne,N., Artiguenave,F., Robert,C., Brottier,P.,
Wincker,P., Cattolico,L., Weissenbach,J., Saurin,W., Quetier,F.,
Schafer,M., Muller-Auer,S., Gabel,C., Fuchs,M., Benes,V.,
Wurmbach,E., Drzonek,H., Erfle,H., Jordan,N., Bangert,S.,
Wiedelmann,R., Kranz,H., Voss,H., Holland,R., Brandt,P.,
Nyakatura,G., Vezzi,A., D'Angelo,M., Pallavicini,A., Toppo,S.,
Simionati,B., Conrad,A., Hornischer,K., Kauer,G., Lohnert,T.H.,
Nordsiek,G., Reichelt,J., Scharfe,M., Schon,O., Bargues,M.,
Terol,J., Climent,J., Navarro,P., Collado,C., Perez-Perez,A.,
Ottenwalder,B., Duchemin,D., Cooke,R., Laudie,M., Berger-Llauro,C.,
Purnelle,B., Masuy,D., de Haan,M., Maarse,A.C., Alcaraz,J.P.,
Cottet,A., Casacuberta,E., Monfort,A., Argiriou,A., flores,M.,
Liguori,R., Vitale,D., Mannhaupt,G., Haase,D., Schoof,H., Rudd,S.,
Zaccaria,P., Mewes,H.W., Mayer,K.F., Kaul,S., Town,C.D., Koo,H.L.,
Tallon,L.J., Jenkins,J., Rooney,T., Rizzo,M., Walts,A.,
Utterback,T., Fujii,C.Y., Shea,T.P., Creasy,T.H., Haas,B.,
Maiti,R., Wu,D., Peterson,J., Van Aken,S., Pai,G., Militscher,J.,
Sellers,P., Gill,J.E., Feldblyum,T.V., Preuss,D., Lin,X.,
Nierman,W.C., Salzberg,S.L., White,O., Venter,J.C., Fraser,C.M.,
Kaneko,T., Nakamura,Y., Sato,S., Kato,T., Asamizu,E., Sasamoto,S.,
Kimura,T., Idesawa,K., Kawashima,K., Kishida,Y., Kiyokawa,C.,
Kohara,M., Matsumoto,M., Matsuno,A., Muraki,A., Nakayama,S.,
Nakazaki,N., Shinpo,S., Takeuchi,C., Wada,T., Watanabe,A.,
Yamada,M., Yasuda,M. and Tabata,S.
CONSRTM European Union Chromosome 3 Arabidopsis Sequencing Consortium;
Institute for Genomic Research; Kazusa DNA Research Institute
TITLE Sequence and analysis of chromosome 3 of the plant Arabidopsis
thaliana
JOURNAL Nature 408 (6814), 820-822 (2000)
PUBMED 11130713
REFERENCE 2 (bases 1 to 23459830)
AUTHORS Swarbreck,D., Lamesch,P., Wilks,C. and Huala,E.
CONSRTM TAIR
TITLE Direct Submission
JOURNAL Submitted (18-FEB-2011) Department of Plant Biology, Carnegie
Institution, 260 Panama Street, Stanford, CA, USA
REFERENCE 3 (bases 1 to 23459830)
AUTHORS Krishnakumar,V., Cheng,C.-Y., Chan,A.P., Schobel,S., Kim,M.,
Ferlanti,E.S., Belyaeva,I., Rosen,B.D., Micklem,G., Miller,J.R.,
Vaughn,M. and Town,C.D.
TITLE Direct Submission
JOURNAL Submitted (17-MAY-2016) Plant Genomics, J. Craig Venter Institute,
9704 Medical Center Dr, Rockville, MD 20850, USA
REMARK Protein update by submitter
FEATURES Qualifiers
source /organism="Arabidopsis thaliana"
/mol_type="genomic DNA"
/db_xref="taxon:3702"
/chromosome="3"
/ecotype="Columbia"
protein /gene="PBB1"
/locus_tag="AT3G27430"
/gene_synonym="20S PROTEASOME BETA SUBUNIT PBB1"
/inference="Similar to RNA sequence,
EST:INSD:ES188966.1,INSD:BP850975.1,INSD:EL972774.1,
INSD:EH985315.1,INSD:EH927478.1,INSD:ES167117.1,
INSD:DR265297.1,INSD:EL064468.1,INSD:EL156745.1,
INSD:ES136392.1,INSD:EL057541.1,INSD:DR265324.1,
INSD:EL266035.1,INSD:EG485808.1,INSD:ES181981.1,
INSD:DR265303.1,INSD:DR265309.1,INSD:DR265316.1,
INSD:EH801180.1,INSD:AV790665.1,INSD:EH818611.1,
INSD:DR265282.1,INSD:DR265326.1,INSD:DR265308.1,
INSD:DR265304.1,INSD:EL064365.1,INSD:F20080.1,
INSD:AV521782.1,INSD:EL106050.1,INSD:BP801699.1,
INSD:DR265318.1,INSD:DR265328.1,INSD:BP797600.1,
INSD:EH874023.1,INSD:DR265290.1,INSD:DR265320.1,
INSD:ES145023.1,INSD:DR265311.1,INSD:DR265293.1,
INSD:DR265314.1,INSD:EL134250.1,INSD:DR265299.1,
INSD:EH917717.1,INSD:DR265305.1,INSD:BP796323.1,
INSD:EL188657.1,INSD:DR265287.1,INSD:DR265291.1,
INSD:BP799388.1,INSD:DR265301.1,INSD:F20081.1,
INSD:DR265294.1,INSD:T76416.1,INSD:EL222073.1,
INSD:DR265292.1,INSD:EL304250.1,INSD:BP809308.1,
INSD:EL081940.1,INSD:ES211836.1,INSD:EL094227.1,
INSD:DR265315.1,INSD:ES012126.1,INSD:EG489869.1,
INSD:EL203549.1,INSD:EL091195.1,INSD:ES090490.1,
INSD:BP802224.1,INSD:EL020496.1,INSD:AV543661.1,
INSD:EL199707.1,INSD:BP852343.1,INSD:EG489870.1,
INSD:DR265302.1,INSD:DR265323.1,INSD:DR265281.1,
INSD:BP858940.1,INSD:EL323311.1,INSD:EL010324.1,
INSD:DR265319.1,INSD:EL989023.1,INSD:EH855205.1,
INSD:DR265329.1,INSD:DR265283.1,INSD:DR265325.1,
INSD:BP851629.1,INSD:CB260208.1,INSD:DR265300.1,
INSD:DR265288.1,INSD:DR265312.1,INSD:DR265327.1,
INSD:AV827884.1,INSD:EL291303.1,INSD:EL272144.1,
INSD:DR265286.1,INSD:EH861158.1,INSD:DR265322.1,
INSD:BP810027.1,INSD:DR265295.1,INSD:EL341425.1"
/note="PBB1; FUNCTIONS IN: peptidase activity,
endopeptidase activity, threonine-type endopeptidase
activity; INVOLVED IN: ubiquitin-dependent protein
catabolic process; LOCATED IN: proteasome core complex,
proteasome complex; EXPRESSED IN: 24 plant structures;
EXPRESSED DURING: 13 growth stages; CONTAINS InterPro
DOMAIN/s: Proteasome, beta-type subunit, conserved site
(InterPro:IPR016050), Peptidase T1A, proteasome
beta-subunit (InterPro:IPR000243), Proteasome, subunit
alpha/beta (InterPro:IPR001353); BEST Arabidopsis thaliana
protein match is: 20S proteasome beta subunit PBB2
(TAIR:AT5G40580.2); Has 6188 Blast hits to 6187 proteins
in 589 species: Archae - 869; Bacteria - 478; Metazoa -
2028; Fungi - 1271; Plants - 666; Viruses - 0; Other
Eukaryotes - 876 (source: NCBI BLink)."
/db_xref="TAIR:AT3G27430"
/db_xref="Araport:AT3G27430"
intron_pos 49:0 (1/7)
intron_pos 96:1 (2/7)
intron_pos 128:2 (3/7)
intron_pos 152:0 (4/7)
intron_pos 187:0 (5/7)
intron_pos 220:0 (6/7)
intron_pos 249:1 (7/7)
BEGIN
1 MSQSTVDVPP KGGFSFDLCK RNDMLTQKGL KAPSFLKTGT TIVGLIFKDG VILGADTRAT
61 EGPIVADKNC EKIHYMAPNI YCCGAGTAAD TEAVTDMVSS QLRLHRYQTG RDSRVITALT
121 LLKKHLFSYQ GHVSAALVLG GVDITGPHLH TIYPHGSTDT LPFATMGSGS LAAMSVFEAK
181 YKEGLTRDEG IKLVAESICS GIFNDLGSGS NVDICVITKG NKEYLRNYME PNPRTYVSSK
241 GYSFTKKTGS SHQNHPIAGA SRNHRSW
//