LOCUS AEE77310.1 279 aa PRT PLN 23-MAR-2023
DEFINITION Arabidopsis thaliana succinate dehydrogenase 2-1 protein.
ACCESSION CP002686-5126
PROTEIN_ID AEE77310.1
SOURCE Arabidopsis thaliana (thale cress)
ORGANISM Arabidopsis thaliana
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
Pentapetalae; rosids; malvids; Brassicales; Brassicaceae;
Camelineae; Arabidopsis.
REFERENCE 1 (bases 1 to 23459830)
AUTHORS Salanoubat,M., Lemcke,K., Rieger,M., Ansorge,W., Unseld,M.,
Fartmann,B., Valle,G., Blocker,H., Perez-Alonso,M., Obermaier,B.,
Delseny,M., Boutry,M., Grivell,L.A., Mache,R., Puigdomenech,P., De
Simone,V., Choisne,N., Artiguenave,F., Robert,C., Brottier,P.,
Wincker,P., Cattolico,L., Weissenbach,J., Saurin,W., Quetier,F.,
Schafer,M., Muller-Auer,S., Gabel,C., Fuchs,M., Benes,V.,
Wurmbach,E., Drzonek,H., Erfle,H., Jordan,N., Bangert,S.,
Wiedelmann,R., Kranz,H., Voss,H., Holland,R., Brandt,P.,
Nyakatura,G., Vezzi,A., D'Angelo,M., Pallavicini,A., Toppo,S.,
Simionati,B., Conrad,A., Hornischer,K., Kauer,G., Lohnert,T.H.,
Nordsiek,G., Reichelt,J., Scharfe,M., Schon,O., Bargues,M.,
Terol,J., Climent,J., Navarro,P., Collado,C., Perez-Perez,A.,
Ottenwalder,B., Duchemin,D., Cooke,R., Laudie,M., Berger-Llauro,C.,
Purnelle,B., Masuy,D., de Haan,M., Maarse,A.C., Alcaraz,J.P.,
Cottet,A., Casacuberta,E., Monfort,A., Argiriou,A., flores,M.,
Liguori,R., Vitale,D., Mannhaupt,G., Haase,D., Schoof,H., Rudd,S.,
Zaccaria,P., Mewes,H.W., Mayer,K.F., Kaul,S., Town,C.D., Koo,H.L.,
Tallon,L.J., Jenkins,J., Rooney,T., Rizzo,M., Walts,A.,
Utterback,T., Fujii,C.Y., Shea,T.P., Creasy,T.H., Haas,B.,
Maiti,R., Wu,D., Peterson,J., Van Aken,S., Pai,G., Militscher,J.,
Sellers,P., Gill,J.E., Feldblyum,T.V., Preuss,D., Lin,X.,
Nierman,W.C., Salzberg,S.L., White,O., Venter,J.C., Fraser,C.M.,
Kaneko,T., Nakamura,Y., Sato,S., Kato,T., Asamizu,E., Sasamoto,S.,
Kimura,T., Idesawa,K., Kawashima,K., Kishida,Y., Kiyokawa,C.,
Kohara,M., Matsumoto,M., Matsuno,A., Muraki,A., Nakayama,S.,
Nakazaki,N., Shinpo,S., Takeuchi,C., Wada,T., Watanabe,A.,
Yamada,M., Yasuda,M. and Tabata,S.
CONSRTM European Union Chromosome 3 Arabidopsis Sequencing Consortium;
Institute for Genomic Research; Kazusa DNA Research Institute
TITLE Sequence and analysis of chromosome 3 of the plant Arabidopsis
thaliana
JOURNAL Nature 408 (6814), 820-822 (2000)
PUBMED 11130713
REFERENCE 2 (bases 1 to 23459830)
AUTHORS Swarbreck,D., Lamesch,P., Wilks,C. and Huala,E.
CONSRTM TAIR
TITLE Direct Submission
JOURNAL Submitted (18-FEB-2011) Department of Plant Biology, Carnegie
Institution, 260 Panama Street, Stanford, CA, USA
REFERENCE 3 (bases 1 to 23459830)
AUTHORS Krishnakumar,V., Cheng,C.-Y., Chan,A.P., Schobel,S., Kim,M.,
Ferlanti,E.S., Belyaeva,I., Rosen,B.D., Micklem,G., Miller,J.R.,
Vaughn,M. and Town,C.D.
TITLE Direct Submission
JOURNAL Submitted (17-MAY-2016) Plant Genomics, J. Craig Venter Institute,
9704 Medical Center Dr, Rockville, MD 20850, USA
REMARK Protein update by submitter
FEATURES Qualifiers
source /organism="Arabidopsis thaliana"
/mol_type="genomic DNA"
/db_xref="taxon:3702"
/chromosome="3"
/ecotype="Columbia"
protein /gene="SDH2-1"
/locus_tag="AT3G27380"
/gene_synonym="succinate dehydrogenase 2-1"
/inference="Similar to RNA sequence,
EST:INSD:EG437501.1,INSD:EG437492.1,INSD:BP858091.1,
INSD:BP563237.1,INSD:ES189650.1,INSD:DR301310.1,
INSD:BP579371.1,INSD:EL074344.1,INSD:ES048773.1,
INSD:EG437524.1,INSD:CB253286.1,INSD:ES132121.1,
INSD:ES140417.1,INSD:EG437509.1,INSD:BP660245.1,
INSD:BP652029.1,INSD:ES063629.1,INSD:CB261067.1,
INSD:AI999187.1,INSD:ES016161.1,INSD:EG437519.1,
INSD:AV789346.1,INSD:EG437514.1,INSD:BP867894.1,
INSD:DR233154.1,INSD:DR301316.1,INSD:CK119309.1,
INSD:DR301327.1,INSD:EG437515.1,INSD:EH802621.1,
INSD:BP624694.1,INSD:T42595.1,INSD:ES073187.1,
INSD:EH972499.1,INSD:EL183643.1,INSD:EG430512.1,
INSD:BP596688.1,INSD:DR259117.1,INSD:DR301306.1,
INSD:ES188085.1,INSD:EL977071.1,INSD:EL981880.1,
INSD:ES203416.1,INSD:BP854849.1,INSD:AV557854.1,
INSD:Z33987.1,INSD:DR370467.1,INSD:BP584240.1,
INSD:EL124626.1,INSD:EH866230.1,INSD:DR301319.1,
INSD:BP850305.1,INSD:EL064230.1,INSD:BP860372.1,
INSD:AI100046.1,INSD:T76709.1,INSD:BP651952.1,
INSD:DR301322.1,INSD:BP814588.1,INSD:AV556598.1,
INSD:BP578101.1,INSD:DR301304.1,INSD:BP865337.1,
INSD:EG437520.1,INSD:EL334664.1,INSD:AV566707.1,
INSD:ES095092.1,INSD:BP600583.1,INSD:BP624903.1,
INSD:ES203063.1,INSD:EL247511.1,INSD:DR301312.1,
INSD:EL112533.1,INSD:EG437488.1,INSD:BP838422.1,
INSD:EL134318.1,INSD:ES172991.1,INSD:ES215657.1,
INSD:ES211606.1,INSD:BP645713.1,INSD:DR379028.1,
INSD:ES115590.1,INSD:EG437495.1,INSD:AV781956.1,
INSD:EG437493.1,INSD:DR301315.1,INSD:DR301318.1,
INSD:DR301308.1,INSD:BP852935.1,INSD:ES029683.1,
INSD:EG480045.1,INSD:DR301328.1,INSD:BP576696.1,
INSD:ES089977.1,INSD:BP812116.1,INSD:DR301326.1,
INSD:EL990225.1,INSD:BP810149.1,INSD:ES150401.1,
INSD:BP823420.1,INSD:EG525588.1,INSD:ES186282.1,
INSD:BP822644.1,INSD:EG480044.1,INSD:EG437517.1,
INSD:BP854407.1,INSD:DR301311.1,INSD:EH957451.1,
INSD:DR372261.1,INSD:EG437489.1,INSD:EG437504.1,
INSD:CB262083.1,INSD:ES014032.1,INSD:EL076461.1,
INSD:ES197496.1,INSD:EL988377.1,INSD:EH943228.1,
INSD:ES206503.1,INSD:EL075606.1,INSD:ES201215.1,
INSD:EG437523.1,INSD:ES015370.1,INSD:EL979490.1,
INSD:DR301301.1,INSD:BP630833.1,INSD:BP818618.1,
INSD:AV522508.1,INSD:BP864228.1,INSD:ES041653.1,
INSD:BP633547.1,INSD:BP629784.1,INSD:AV821485.1,
INSD:BP574440.1,INSD:BP603967.1,INSD:CB254545.1,
INSD:DR301321.1,INSD:AV822306.1,INSD:EG437521.1,
INSD:R65454.1,INSD:EL271118.1,INSD:ES083595.1,
INSD:AV786667.1,INSD:DR301317.1,INSD:ES173125.1,
INSD:EG437508.1,INSD:EH901758.1,INSD:BP581398.1,
INSD:BP824264.1,INSD:DR301307.1,INSD:EL128790.1,
INSD:EG511628.1,INSD:DR301325.1,INSD:BP644472.1,
INSD:EG437512.1,INSD:AV532500.1,INSD:Z26565.1,
INSD:BP625130.1,INSD:EH938582.1,INSD:BP635487.1,
INSD:DR301302.1,INSD:AI100354.1,INSD:BP618572.1,
INSD:EL998320.1,INSD:EL116994.1,INSD:BP662786.1,
INSD:EL110218.1,INSD:DR301320.1,INSD:BP632156.1,
INSD:BP653637.1,INSD:ES154563.1,INSD:BP797694.1,
INSD:BP827996.1,INSD:AV560856.1,INSD:AV550775.1,
INSD:EH836733.1,INSD:EL002662.1,INSD:EG437522.1,
INSD:DR301305.1,INSD:EG430514.1,INSD:DR301309.1,
INSD:EG437527.1,INSD:EL315137.1,INSD:DR301303.1,
INSD:EL261925.1,INSD:ES129326.1,INSD:DR259116.1,
INSD:T41976.1,INSD:BP820993.1,INSD:DR233153.1,
INSD:DR238813.1,INSD:BP624701.1,INSD:EG437525.1,
INSD:DR301313.1,INSD:CB252824.1,INSD:EL132379.1,
INSD:DR301324.1,INSD:BP826043.1,INSD:EG437516.1,
INSD:ES101137.1,INSD:BP821609.1,INSD:CB254542.1,
INSD:BP800911.1,INSD:EH919348.1,INSD:EG437526.1,
INSD:DR301323.1,INSD:ES078510.1,INSD:ES209229.1,
INSD:ES178837.1,INSD:BP856454.1,INSD:BP647856.1,
INSD:DR290692.1,INSD:DR301329.1,INSD:ES125349.1,
INSD:BP594831.1,INSD:AI993962.1,INSD:EG437505.1,
INSD:BP580044.1,INSD:EH934674.1,INSD:DR301314.1,
INSD:EG437513.1,INSD:ES094879.1,INSD:ES190780.1,
INSD:AV783029.1,INSD:EG437510.1,INSD:ES170293.1"
/inference="Similar to RNA sequence,
mRNA:INSD:BX842200.1,INSD:BX825805.1,INSD:AY924777.1,
INSD:AY086901.1,INSD:AJ278910.1,INSD:AY037250.1,
INSD:AY735609.1,INSD:AY035013.1,INSD:AY077654.1,
INSD:AY063053.1"
/note="succinate dehydrogenase 2-1 (SDH2-1); CONTAINS
InterPro DOMAIN/s: Ferredoxin (InterPro:IPR001041),
Beta-grasp fold, ferredoxin-type (InterPro:IPR012675),
Fumarate reductase, C-terminal (InterPro:IPR012285),
2Fe-2S ferredoxin, iron-sulphur binding site
(InterPro:IPR006058), 4Fe-4S ferredoxin, iron-sulpur
binding domain (InterPro:IPR017896), 4Fe-4S ferredoxin,
iron-sulphur binding, conserved site (InterPro:IPR017900),
Alpha-helical ferredoxin (InterPro:IPR009051), Succinate
dehydrogenase/fumarate reductase iron-sulphur protein
(InterPro:IPR004489); BEST Arabidopsis thaliana protein
match is: succinate dehydrogenase 2-2 (TAIR:AT5G40650.1);
Has 30201 Blast hits to 17322 proteins in 780 species:
Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi -
3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996
(source: NCBI BLink)."
/db_xref="TAIR:AT3G27380"
/db_xref="Araport:AT3G27380"
intron_pos 225:2 (1/1)
BEGIN
1 MASGLIGRLV GTKPSKLATA ARLIPARWTS TGAEAETKAS SGGGRGSNLK TFQIYRWNPD
61 NPGKPELQNY QIDLKDCGPM VLDALIKIKN EMDPSLTFRR SCREGICGSC AMNIDGCNGL
121 ACLTKIQDEA SETTITPLPH MFVIKDLVVD MTNFYNQYKS IEPWLKRKTP ASVPAKEILQ
181 SKKDRAKLDG MYECILCACC STSCPSYWWN PESYLGPAAL LHANRWISDS RDEYTKERLE
241 AIDDEFKLYR CHTILNCARA CPKGLNPGKQ ITHIKQLQR
//