LOCUS AEE77301.1 913 aa PRT PLN 23-MAR-2023
DEFINITION Arabidopsis thaliana zinc finger (C3HC4-type RING finger)
family protein protein.
ACCESSION CP002686-5115
PROTEIN_ID AEE77301.1
SOURCE Arabidopsis thaliana (thale cress)
ORGANISM Arabidopsis thaliana
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
Pentapetalae; rosids; malvids; Brassicales; Brassicaceae;
Camelineae; Arabidopsis.
REFERENCE 1 (bases 1 to 23459830)
AUTHORS Salanoubat,M., Lemcke,K., Rieger,M., Ansorge,W., Unseld,M.,
Fartmann,B., Valle,G., Blocker,H., Perez-Alonso,M., Obermaier,B.,
Delseny,M., Boutry,M., Grivell,L.A., Mache,R., Puigdomenech,P., De
Simone,V., Choisne,N., Artiguenave,F., Robert,C., Brottier,P.,
Wincker,P., Cattolico,L., Weissenbach,J., Saurin,W., Quetier,F.,
Schafer,M., Muller-Auer,S., Gabel,C., Fuchs,M., Benes,V.,
Wurmbach,E., Drzonek,H., Erfle,H., Jordan,N., Bangert,S.,
Wiedelmann,R., Kranz,H., Voss,H., Holland,R., Brandt,P.,
Nyakatura,G., Vezzi,A., D'Angelo,M., Pallavicini,A., Toppo,S.,
Simionati,B., Conrad,A., Hornischer,K., Kauer,G., Lohnert,T.H.,
Nordsiek,G., Reichelt,J., Scharfe,M., Schon,O., Bargues,M.,
Terol,J., Climent,J., Navarro,P., Collado,C., Perez-Perez,A.,
Ottenwalder,B., Duchemin,D., Cooke,R., Laudie,M., Berger-Llauro,C.,
Purnelle,B., Masuy,D., de Haan,M., Maarse,A.C., Alcaraz,J.P.,
Cottet,A., Casacuberta,E., Monfort,A., Argiriou,A., flores,M.,
Liguori,R., Vitale,D., Mannhaupt,G., Haase,D., Schoof,H., Rudd,S.,
Zaccaria,P., Mewes,H.W., Mayer,K.F., Kaul,S., Town,C.D., Koo,H.L.,
Tallon,L.J., Jenkins,J., Rooney,T., Rizzo,M., Walts,A.,
Utterback,T., Fujii,C.Y., Shea,T.P., Creasy,T.H., Haas,B.,
Maiti,R., Wu,D., Peterson,J., Van Aken,S., Pai,G., Militscher,J.,
Sellers,P., Gill,J.E., Feldblyum,T.V., Preuss,D., Lin,X.,
Nierman,W.C., Salzberg,S.L., White,O., Venter,J.C., Fraser,C.M.,
Kaneko,T., Nakamura,Y., Sato,S., Kato,T., Asamizu,E., Sasamoto,S.,
Kimura,T., Idesawa,K., Kawashima,K., Kishida,Y., Kiyokawa,C.,
Kohara,M., Matsumoto,M., Matsuno,A., Muraki,A., Nakayama,S.,
Nakazaki,N., Shinpo,S., Takeuchi,C., Wada,T., Watanabe,A.,
Yamada,M., Yasuda,M. and Tabata,S.
CONSRTM European Union Chromosome 3 Arabidopsis Sequencing Consortium;
Institute for Genomic Research; Kazusa DNA Research Institute
TITLE Sequence and analysis of chromosome 3 of the plant Arabidopsis
thaliana
JOURNAL Nature 408 (6814), 820-822 (2000)
PUBMED 11130713
REFERENCE 2 (bases 1 to 23459830)
AUTHORS Swarbreck,D., Lamesch,P., Wilks,C. and Huala,E.
CONSRTM TAIR
TITLE Direct Submission
JOURNAL Submitted (18-FEB-2011) Department of Plant Biology, Carnegie
Institution, 260 Panama Street, Stanford, CA, USA
REFERENCE 3 (bases 1 to 23459830)
AUTHORS Krishnakumar,V., Cheng,C.-Y., Chan,A.P., Schobel,S., Kim,M.,
Ferlanti,E.S., Belyaeva,I., Rosen,B.D., Micklem,G., Miller,J.R.,
Vaughn,M. and Town,C.D.
TITLE Direct Submission
JOURNAL Submitted (17-MAY-2016) Plant Genomics, J. Craig Venter Institute,
9704 Medical Center Dr, Rockville, MD 20850, USA
REMARK Protein update by submitter
FEATURES Qualifiers
source /organism="Arabidopsis thaliana"
/mol_type="genomic DNA"
/db_xref="taxon:3702"
/chromosome="3"
/ecotype="Columbia"
protein /locus_tag="AT3G27330"
/inference="Similar to RNA sequence,
EST:INSD:ES130659.1,INSD:BE521037.1,INSD:BE530633.1,
INSD:ES123866.1,INSD:AV823146.1,INSD:EL077762.1,
INSD:BE521038.1,INSD:ES169843.1,INSD:ES119138.1,
INSD:EG520702.1,INSD:AV553187.1,INSD:ES148980.1,
INSD:BX840171.1,INSD:EG520703.1"
/note="zinc finger (C3HC4-type RING finger) family
protein; FUNCTIONS IN: zinc ion binding; EXPRESSED IN: 18
plant structures; EXPRESSED DURING: 8 growth stages;
CONTAINS InterPro DOMAIN/s: Zinc finger, RING-type,
conserved site (InterPro:IPR017907), Zinc finger,
RING-type (InterPro:IPR001841), Protein of unknown
function DUF23 (InterPro:IPR008166); BEST Arabidopsis
thaliana protein match is: Domain of unknown function
(DUF23) (TAIR:AT5G40720.1); Has 9172 Blast hits to 9085
proteins in 2351 species: Archae - 0; Bacteria - 208;
Metazoa - 7155; Fungi - 537; Plants - 665; Viruses - 17;
Other Eukaryotes - 590 (source: NCBI BLink)."
/db_xref="TAIR:AT3G27330"
/db_xref="Araport:AT3G27330"
intron_pos 557:0 (1/6)
intron_pos 652:2 (2/6)
intron_pos 676:1 (3/6)
intron_pos 726:0 (4/6)
intron_pos 742:2 (5/6)
intron_pos 767:2 (6/6)
BEGIN
1 MKVRRKLGGG CGGDVVVSWR TFFWFVILFV FSFVLFSTMF IFKGKFRPVV RSTISFSTAV
61 TARAVFRESI SSSPAVTIRE AVKLPEQTLV FLKYPQSRRL FTKDDLICVF SGSSKLRKVY
121 PTAVDRDKFG GQIVRCPETP RGYTISLAVS RWTTDDHLPA GPTHRYDWLV YDAVIDYDNS
181 TVVFVKGLNL RPGRVADVSR YECVYGWDFA KHNRLIRSDV ITAAQEIVRC RTPLAVLDGP
241 KAARGPVKVS VRIKGGTGML PSIAQPVRII NPPRKKPFQM CVCTMTRNAA AVLREWVMYH
301 AGIGVQRWFI YDNNSDDDII AEIENLERRG YNISRHFWPW IKTQEAGFSN CAIRAKSDCD
361 WIAFIDVDEF FYIPSGETLT SVIRNYTTTD SIGEIRTPCH SFGPSGLRSR PRSGVTSGYT
421 CRVVLPERHK SIIRPEAMNA TLINVVHHFH LRDGFTFADM DKDIMVINHY KYQVWEVFKE
481 KFYRRVATYV ADWQNEENVG SRDRAPGLGT RPVEPSDWAE RFCEVNDTGL RDQVFEKFKD
541 KKTQRLVWEK AEEDDNIQRM VSETPLRVTN RSGDGSNGSK EVSIAREKNG ENAEIFISPR
601 FKSAAAMAGW DEEDLIIASF VVDDTPERSS SKRRRRSNLL FKSTPPSGSS RRNQRVKQSL
661 VPLPVIDLDK VIRHEEEKSA EKKKKKREME TETKEEKKID KDEKSLSDHV VLPCIDKLRD
721 ELSCAICLEI CFEPSTTTCG HSFCKKCLRS AADKCGRKCP KCRQLIGNGR YCTVNTVLWN
781 TIQLLFPKEV EAQRAASANL KGKETPSPRN PNQRLRSRNR ETALFQERLQ REDISRLLVS
841 EERSERSERR RRSTSMRLDQ NRDAALAMRL QRQEFASAFG ATTAETSSSS VSTLSRARAN
901 LQAMASRAVR RQG
//