LOCUS AEE77255.1 676 aa PRT PLN 23-MAR-2023
DEFINITION Arabidopsis thaliana YELLOW STRIPE like 6 protein.
ACCESSION CP002686-5054
PROTEIN_ID AEE77255.1
SOURCE Arabidopsis thaliana (thale cress)
ORGANISM Arabidopsis thaliana
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
Pentapetalae; rosids; malvids; Brassicales; Brassicaceae;
Camelineae; Arabidopsis.
REFERENCE 1 (bases 1 to 23459830)
AUTHORS Salanoubat,M., Lemcke,K., Rieger,M., Ansorge,W., Unseld,M.,
Fartmann,B., Valle,G., Blocker,H., Perez-Alonso,M., Obermaier,B.,
Delseny,M., Boutry,M., Grivell,L.A., Mache,R., Puigdomenech,P., De
Simone,V., Choisne,N., Artiguenave,F., Robert,C., Brottier,P.,
Wincker,P., Cattolico,L., Weissenbach,J., Saurin,W., Quetier,F.,
Schafer,M., Muller-Auer,S., Gabel,C., Fuchs,M., Benes,V.,
Wurmbach,E., Drzonek,H., Erfle,H., Jordan,N., Bangert,S.,
Wiedelmann,R., Kranz,H., Voss,H., Holland,R., Brandt,P.,
Nyakatura,G., Vezzi,A., D'Angelo,M., Pallavicini,A., Toppo,S.,
Simionati,B., Conrad,A., Hornischer,K., Kauer,G., Lohnert,T.H.,
Nordsiek,G., Reichelt,J., Scharfe,M., Schon,O., Bargues,M.,
Terol,J., Climent,J., Navarro,P., Collado,C., Perez-Perez,A.,
Ottenwalder,B., Duchemin,D., Cooke,R., Laudie,M., Berger-Llauro,C.,
Purnelle,B., Masuy,D., de Haan,M., Maarse,A.C., Alcaraz,J.P.,
Cottet,A., Casacuberta,E., Monfort,A., Argiriou,A., flores,M.,
Liguori,R., Vitale,D., Mannhaupt,G., Haase,D., Schoof,H., Rudd,S.,
Zaccaria,P., Mewes,H.W., Mayer,K.F., Kaul,S., Town,C.D., Koo,H.L.,
Tallon,L.J., Jenkins,J., Rooney,T., Rizzo,M., Walts,A.,
Utterback,T., Fujii,C.Y., Shea,T.P., Creasy,T.H., Haas,B.,
Maiti,R., Wu,D., Peterson,J., Van Aken,S., Pai,G., Militscher,J.,
Sellers,P., Gill,J.E., Feldblyum,T.V., Preuss,D., Lin,X.,
Nierman,W.C., Salzberg,S.L., White,O., Venter,J.C., Fraser,C.M.,
Kaneko,T., Nakamura,Y., Sato,S., Kato,T., Asamizu,E., Sasamoto,S.,
Kimura,T., Idesawa,K., Kawashima,K., Kishida,Y., Kiyokawa,C.,
Kohara,M., Matsumoto,M., Matsuno,A., Muraki,A., Nakayama,S.,
Nakazaki,N., Shinpo,S., Takeuchi,C., Wada,T., Watanabe,A.,
Yamada,M., Yasuda,M. and Tabata,S.
CONSRTM European Union Chromosome 3 Arabidopsis Sequencing Consortium;
Institute for Genomic Research; Kazusa DNA Research Institute
TITLE Sequence and analysis of chromosome 3 of the plant Arabidopsis
thaliana
JOURNAL Nature 408 (6814), 820-822 (2000)
PUBMED 11130713
REFERENCE 2 (bases 1 to 23459830)
AUTHORS Swarbreck,D., Lamesch,P., Wilks,C. and Huala,E.
CONSRTM TAIR
TITLE Direct Submission
JOURNAL Submitted (18-FEB-2011) Department of Plant Biology, Carnegie
Institution, 260 Panama Street, Stanford, CA, USA
REFERENCE 3 (bases 1 to 23459830)
AUTHORS Krishnakumar,V., Cheng,C.-Y., Chan,A.P., Schobel,S., Kim,M.,
Ferlanti,E.S., Belyaeva,I., Rosen,B.D., Micklem,G., Miller,J.R.,
Vaughn,M. and Town,C.D.
TITLE Direct Submission
JOURNAL Submitted (17-MAY-2016) Plant Genomics, J. Craig Venter Institute,
9704 Medical Center Dr, Rockville, MD 20850, USA
REMARK Protein update by submitter
FEATURES Qualifiers
source /organism="Arabidopsis thaliana"
/mol_type="genomic DNA"
/db_xref="taxon:3702"
/chromosome="3"
/ecotype="Columbia"
protein /gene="YSL6"
/locus_tag="AT3G27020"
/gene_synonym="AtYSL6"
/gene_synonym="YELLOW STRIPE like 6"
/inference="Similar to RNA sequence,
EST:INSD:AV831161.1,INSD:BX840764.1,INSD:EH894883.1,
INSD:DR375406.1,INSD:DR288620.1,INSD:EH956674.1,
INSD:EG517363.1,INSD:EL282964.1,INSD:AA650765.1,
INSD:ES195547.1,INSD:EL208357.1,INSD:BP608908.1,
INSD:EH991791.1,INSD:BP809742.1,INSD:EL232778.1,
INSD:AV783904.1,INSD:AV440199.1,INSD:BX836486.1,
INSD:BP620909.1,INSD:EH925323.1,INSD:BP621148.1,
INSD:T45138.1,INSD:EL244111.1,INSD:BP623675.1,
INSD:EH974102.1,INSD:BP613911.1,INSD:DR288621.1,
INSD:BP595179.1,INSD:DR288622.1,INSD:BP599908.1,
INSD:CB252303.1,INSD:EH904751.1,INSD:AV801807.1,
INSD:EG517352.1,INSD:AV801779.1,INSD:T43822.1,
INSD:EH885058.1,INSD:BP613754.1,INSD:BP570258.1,
INSD:EL155209.1,INSD:EL113566.1,INSD:EH958453.1,
INSD:R30000.1,INSD:BP634580.1,INSD:ES170082.1,
INSD:EL017283.1,INSD:AV802899.1,INSD:AV807438.1,
INSD:ES128254.1,INSD:EL225089.1,INSD:EL046286.1,
INSD:AV815205.1,INSD:BP619293.1,INSD:EH941321.1,
INSD:EH952770.1,INSD:BP618625.1,INSD:CB261435.1,
INSD:AV823015.1,INSD:AI995918.1,INSD:EH900114.1,
INSD:BP564714.1,INSD:AV559609.1,INSD:EL015464.1"
/inference="Similar to RNA sequence,
mRNA:INSD:AY515564.1,INSD:BX823881.1,INSD:AY087380.1,
INSD:AY120725.1"
/note="YELLOW STRIPE like 6 (YSL6); FUNCTIONS IN:
oligopeptide transporter activity; INVOLVED IN:
oligopeptide transport, transmembrane transport; LOCATED
IN: plasma membrane; EXPRESSED IN: 25 plant structures;
EXPRESSED DURING: 15 growth stages; CONTAINS InterPro
DOMAIN/s: Oligopeptide transporter OPT superfamily
(InterPro:IPR004813); BEST Arabidopsis thaliana protein
match is: YELLOW STRIPE like 4 (TAIR:AT5G41000.1); Has
1640 Blast hits to 1588 proteins in 511 species: Archae -
21; Bacteria - 808; Metazoa - 0; Fungi - 241; Plants -
449; Viruses - 1; Other Eukaryotes - 120 (source: NCBI
BLink)."
/db_xref="TAIR:AT3G27020"
/db_xref="Araport:AT3G27020"
intron_pos 121:1 (1/6)
intron_pos 179:0 (2/6)
intron_pos 211:2 (3/6)
intron_pos 257:2 (4/6)
intron_pos 321:0 (5/6)
intron_pos 365:1 (6/6)
BEGIN
1 MGTEIPRSAE ISEALLPPES EKTVTATEEH VPEWKEQITI RGLTVSALLG TLFCIITHKL
61 NLTVGIIPSL NVAAGLLGFF FVKSWTGFLS KLGFTVKPFT KQENTVIQTC VVACYGLAFS
121 GGFGSYLIAM DEKTYKLIGA DYPGNHAEDV INPGLWWMIG FLFVVSFLGL FSLVPLRKVM
181 VLDYKLTYPS GTATAMLINS FHTNTGAELA GNQVKCLGKY LSLSLIWSCF KWFFSGIGDA
241 CGFDNFPTLG LTLFKNTFYF DFSPTYIGCG LICPHIVNCS VLLGAIISWG ILWPFVSQHA
301 GDWYPADLGS NDFKGLYGYK VFIAIAIILG DGLYNLVKII AVTVKELCSS RSRRLNLPIV
361 TDGVDDSEAS EILLVKKKRD EVFLKDRIPL EFAIAGYVGL AAISTATIPI IFPPLKWYFV
421 LCSYFIAPAL AFCNSYGTGL TDWSLASTYG KIGLFIIASV VGSDGGVIAG LAACGVMMSI
481 VSTAADLMQD FKTGYLTLSS AKSMFVSQLV GTAMGCVIAP LTFWLFWTAF DIGDPNGPYK
541 APYAVIFREM AILGIEGFAE LPKHCLALCY GFFIAALIVN LLRDITPPKI SQFIPIPMAM
601 AVPFYIGAYF AIDMFVGTVI LFVWERINRK DAEDFAGAVA SGLICGDGIW TIPSAILSIL
661 RINPPICMYF GPSSAR
//