LOCUS AEE77247.1 443 aa PRT PLN 23-MAR-2023
DEFINITION Arabidopsis thaliana DHHC-type zinc finger family protein protein.
ACCESSION CP002686-5044
PROTEIN_ID AEE77247.1
SOURCE Arabidopsis thaliana (thale cress)
ORGANISM Arabidopsis thaliana
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
Pentapetalae; rosids; malvids; Brassicales; Brassicaceae;
Camelineae; Arabidopsis.
REFERENCE 1 (bases 1 to 23459830)
AUTHORS Salanoubat,M., Lemcke,K., Rieger,M., Ansorge,W., Unseld,M.,
Fartmann,B., Valle,G., Blocker,H., Perez-Alonso,M., Obermaier,B.,
Delseny,M., Boutry,M., Grivell,L.A., Mache,R., Puigdomenech,P., De
Simone,V., Choisne,N., Artiguenave,F., Robert,C., Brottier,P.,
Wincker,P., Cattolico,L., Weissenbach,J., Saurin,W., Quetier,F.,
Schafer,M., Muller-Auer,S., Gabel,C., Fuchs,M., Benes,V.,
Wurmbach,E., Drzonek,H., Erfle,H., Jordan,N., Bangert,S.,
Wiedelmann,R., Kranz,H., Voss,H., Holland,R., Brandt,P.,
Nyakatura,G., Vezzi,A., D'Angelo,M., Pallavicini,A., Toppo,S.,
Simionati,B., Conrad,A., Hornischer,K., Kauer,G., Lohnert,T.H.,
Nordsiek,G., Reichelt,J., Scharfe,M., Schon,O., Bargues,M.,
Terol,J., Climent,J., Navarro,P., Collado,C., Perez-Perez,A.,
Ottenwalder,B., Duchemin,D., Cooke,R., Laudie,M., Berger-Llauro,C.,
Purnelle,B., Masuy,D., de Haan,M., Maarse,A.C., Alcaraz,J.P.,
Cottet,A., Casacuberta,E., Monfort,A., Argiriou,A., flores,M.,
Liguori,R., Vitale,D., Mannhaupt,G., Haase,D., Schoof,H., Rudd,S.,
Zaccaria,P., Mewes,H.W., Mayer,K.F., Kaul,S., Town,C.D., Koo,H.L.,
Tallon,L.J., Jenkins,J., Rooney,T., Rizzo,M., Walts,A.,
Utterback,T., Fujii,C.Y., Shea,T.P., Creasy,T.H., Haas,B.,
Maiti,R., Wu,D., Peterson,J., Van Aken,S., Pai,G., Militscher,J.,
Sellers,P., Gill,J.E., Feldblyum,T.V., Preuss,D., Lin,X.,
Nierman,W.C., Salzberg,S.L., White,O., Venter,J.C., Fraser,C.M.,
Kaneko,T., Nakamura,Y., Sato,S., Kato,T., Asamizu,E., Sasamoto,S.,
Kimura,T., Idesawa,K., Kawashima,K., Kishida,Y., Kiyokawa,C.,
Kohara,M., Matsumoto,M., Matsuno,A., Muraki,A., Nakayama,S.,
Nakazaki,N., Shinpo,S., Takeuchi,C., Wada,T., Watanabe,A.,
Yamada,M., Yasuda,M. and Tabata,S.
CONSRTM European Union Chromosome 3 Arabidopsis Sequencing Consortium;
Institute for Genomic Research; Kazusa DNA Research Institute
TITLE Sequence and analysis of chromosome 3 of the plant Arabidopsis
thaliana
JOURNAL Nature 408 (6814), 820-822 (2000)
PUBMED 11130713
REFERENCE 2 (bases 1 to 23459830)
AUTHORS Swarbreck,D., Lamesch,P., Wilks,C. and Huala,E.
CONSRTM TAIR
TITLE Direct Submission
JOURNAL Submitted (18-FEB-2011) Department of Plant Biology, Carnegie
Institution, 260 Panama Street, Stanford, CA, USA
REFERENCE 3 (bases 1 to 23459830)
AUTHORS Krishnakumar,V., Cheng,C.-Y., Chan,A.P., Schobel,S., Kim,M.,
Ferlanti,E.S., Belyaeva,I., Rosen,B.D., Micklem,G., Miller,J.R.,
Vaughn,M. and Town,C.D.
TITLE Direct Submission
JOURNAL Submitted (17-MAY-2016) Plant Genomics, J. Craig Venter Institute,
9704 Medical Center Dr, Rockville, MD 20850, USA
REMARK Protein update by submitter
FEATURES Qualifiers
source /organism="Arabidopsis thaliana"
/mol_type="genomic DNA"
/db_xref="taxon:3702"
/chromosome="3"
/ecotype="Columbia"
protein /locus_tag="AT3G26935"
/inference="Similar to RNA sequence,
EST:INSD:ES140271.1,INSD:EL994970.1,INSD:EL203332.1,
INSD:EH886252.1,INSD:EL988786.1,INSD:EH798894.1,
INSD:AU228234.1,INSD:EL978373.1,INSD:ES086987.1,
INSD:EL308579.1,INSD:EL262633.1,INSD:BP786644.1,
INSD:EH925551.1,INSD:ES179126.1,INSD:EL130426.1,
INSD:ES107394.1,INSD:EH876612.1,INSD:EL205177.1,
INSD:EH807935.1,INSD:ES024122.1,INSD:ES199228.1,
INSD:EL086629.1,INSD:EL249353.1,INSD:BP784919.1,
INSD:DR384169.1,INSD:EH911308.1,INSD:EL170482.1,
INSD:EH979259.1,INSD:EL116805.1,INSD:ES028704.1,
INSD:AI998836.1,INSD:EL287004.1,INSD:EH842706.1,
INSD:EL021657.1,INSD:EL973972.1,INSD:EL971600.1,
INSD:ES019108.1,INSD:EH891780.1,INSD:EL995456.1,
INSD:ES196169.1,INSD:EH988054.1,INSD:ES066599.1,
INSD:EH795341.1,INSD:BP819801.1,INSD:EH865240.1,
INSD:EL034186.1,INSD:EL160577.1,INSD:EL093151.1,
INSD:ES142825.1,INSD:EL273049.1,INSD:EH885164.1,
INSD:EL287788.1,INSD:DR368195.1,INSD:EL291221.1,
INSD:EH888123.1,INSD:EH929686.1,INSD:EL130825.1,
INSD:EH858933.1,INSD:ES065232.1,INSD:EL999151.1,
INSD:EH833626.1,INSD:EH933798.1,INSD:EL124220.1,
INSD:ES117535.1,INSD:EL034805.1,INSD:EL185348.1,
INSD:EL297543.1,INSD:EL167107.1,INSD:EL061471.1,
INSD:EL070544.1,INSD:EH875879.1,INSD:EH803120.1,
INSD:EL144410.1,INSD:EH835431.1,INSD:EL145144.1,
INSD:BP865685.1,INSD:EH828702.1,INSD:EL315830.1,
INSD:EL214382.1"
/inference="Similar to RNA sequence, mRNA:INSD:AK228693.1"
/note="DHHC-type zinc finger family protein; FUNCTIONS IN:
zinc ion binding; INVOLVED IN: biological_process unknown;
LOCATED IN: plasma membrane; EXPRESSED IN: 24 plant
structures; EXPRESSED DURING: 12 growth stages; CONTAINS
InterPro DOMAIN/s: Zinc finger, DHHC-type
(InterPro:IPR001594); BEST Arabidopsis thaliana protein
match is: DHHC-type zinc finger family protein
(TAIR:AT5G41060.1); Has 5153 Blast hits to 5144 proteins
in 252 species: Archae - 0; Bacteria - 0; Metazoa - 2200;
Fungi - 770; Plants - 850; Viruses - 0; Other Eukaryotes -
1333 (source: NCBI BLink)."
/db_xref="TAIR:AT3G26935"
/db_xref="Araport:AT3G26935"
intron_pos 29:0 (1/4)
intron_pos 90:0 (2/4)
intron_pos 189:0 (3/4)
intron_pos 267:0 (4/4)
BEGIN
1 MYVVPPPQRS DSGSNGDLRV YQTWKGSNIF FLQGRFVFGP DVRSLALTIC LIAVPVTIFC
61 IFVARKLIDD FSDSWGVSIV AVAVVFTIYD LILLLLTSGR DPGIIPRNAH PPEPETLDGN
121 MDAGAGQTPQ LRLPRIKEVQ LNGITFKVKY CDTCMLYRPP RCSHCSICNN CVERFDHHCP
181 WVGQCIGMRN YRFFFMFVFS TTLLCIYVFA FCWVYIRKIM ESEHTTTWKA MLKTPASIVL
241 IIYTFISMWF VGGLTVFHLY LISTNQTTYE NFRYRYDRRS NPHNKGVVNN FKETFFSTIP
301 PSKNDFRAMV QREPPLPPRS VAGGFMSPNM GKANDEIEMG RKAVWADMGP AMSDHGDGKH
361 GNNERLHVKD GELGELSPDI RATVDEQSDR PSMHPRRSSW GRKSGSWDMS PEVMALAARV
421 GEQNQNGGGS SSGSGLVTEN RPT
//