LOCUS AEE77210.1 494 aa PRT PLN 23-MAR-2023
DEFINITION Arabidopsis thaliana basic helix-loop-helix (bHLH) DNA-
binding superfamily protein protein.
ACCESSION CP002686-4994
PROTEIN_ID AEE77210.1
SOURCE Arabidopsis thaliana (thale cress)
ORGANISM Arabidopsis thaliana
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
Pentapetalae; rosids; malvids; Brassicales; Brassicaceae;
Camelineae; Arabidopsis.
REFERENCE 1 (bases 1 to 23459830)
AUTHORS Salanoubat,M., Lemcke,K., Rieger,M., Ansorge,W., Unseld,M.,
Fartmann,B., Valle,G., Blocker,H., Perez-Alonso,M., Obermaier,B.,
Delseny,M., Boutry,M., Grivell,L.A., Mache,R., Puigdomenech,P., De
Simone,V., Choisne,N., Artiguenave,F., Robert,C., Brottier,P.,
Wincker,P., Cattolico,L., Weissenbach,J., Saurin,W., Quetier,F.,
Schafer,M., Muller-Auer,S., Gabel,C., Fuchs,M., Benes,V.,
Wurmbach,E., Drzonek,H., Erfle,H., Jordan,N., Bangert,S.,
Wiedelmann,R., Kranz,H., Voss,H., Holland,R., Brandt,P.,
Nyakatura,G., Vezzi,A., D'Angelo,M., Pallavicini,A., Toppo,S.,
Simionati,B., Conrad,A., Hornischer,K., Kauer,G., Lohnert,T.H.,
Nordsiek,G., Reichelt,J., Scharfe,M., Schon,O., Bargues,M.,
Terol,J., Climent,J., Navarro,P., Collado,C., Perez-Perez,A.,
Ottenwalder,B., Duchemin,D., Cooke,R., Laudie,M., Berger-Llauro,C.,
Purnelle,B., Masuy,D., de Haan,M., Maarse,A.C., Alcaraz,J.P.,
Cottet,A., Casacuberta,E., Monfort,A., Argiriou,A., flores,M.,
Liguori,R., Vitale,D., Mannhaupt,G., Haase,D., Schoof,H., Rudd,S.,
Zaccaria,P., Mewes,H.W., Mayer,K.F., Kaul,S., Town,C.D., Koo,H.L.,
Tallon,L.J., Jenkins,J., Rooney,T., Rizzo,M., Walts,A.,
Utterback,T., Fujii,C.Y., Shea,T.P., Creasy,T.H., Haas,B.,
Maiti,R., Wu,D., Peterson,J., Van Aken,S., Pai,G., Militscher,J.,
Sellers,P., Gill,J.E., Feldblyum,T.V., Preuss,D., Lin,X.,
Nierman,W.C., Salzberg,S.L., White,O., Venter,J.C., Fraser,C.M.,
Kaneko,T., Nakamura,Y., Sato,S., Kato,T., Asamizu,E., Sasamoto,S.,
Kimura,T., Idesawa,K., Kawashima,K., Kishida,Y., Kiyokawa,C.,
Kohara,M., Matsumoto,M., Matsuno,A., Muraki,A., Nakayama,S.,
Nakazaki,N., Shinpo,S., Takeuchi,C., Wada,T., Watanabe,A.,
Yamada,M., Yasuda,M. and Tabata,S.
CONSRTM European Union Chromosome 3 Arabidopsis Sequencing Consortium;
Institute for Genomic Research; Kazusa DNA Research Institute
TITLE Sequence and analysis of chromosome 3 of the plant Arabidopsis
thaliana
JOURNAL Nature 408 (6814), 820-822 (2000)
PUBMED 11130713
REFERENCE 2 (bases 1 to 23459830)
AUTHORS Swarbreck,D., Lamesch,P., Wilks,C. and Huala,E.
CONSRTM TAIR
TITLE Direct Submission
JOURNAL Submitted (18-FEB-2011) Department of Plant Biology, Carnegie
Institution, 260 Panama Street, Stanford, CA, USA
REFERENCE 3 (bases 1 to 23459830)
AUTHORS Krishnakumar,V., Cheng,C.-Y., Chan,A.P., Schobel,S., Kim,M.,
Ferlanti,E.S., Belyaeva,I., Rosen,B.D., Micklem,G., Miller,J.R.,
Vaughn,M. and Town,C.D.
TITLE Direct Submission
JOURNAL Submitted (17-MAY-2016) Plant Genomics, J. Craig Venter Institute,
9704 Medical Center Dr, Rockville, MD 20850, USA
REMARK Protein update by submitter
FEATURES Qualifiers
source /organism="Arabidopsis thaliana"
/mol_type="genomic DNA"
/db_xref="taxon:3702"
/chromosome="3"
/ecotype="Columbia"
protein /gene="ICE1"
/locus_tag="AT3G26744"
/gene_synonym="A. THALIANA INDUCER OF CBP EXPRESSION 1"
/gene_synonym="ATICE1"
/gene_synonym="INDUCER OF CBF EXPRESSION 1"
/gene_synonym="SCREAM"
/gene_synonym="SCRM"
/inference="Similar to RNA sequence,
EST:INSD:EH975265.1,INSD:BP789605.1,INSD:AV563738.1,
INSD:CB257066.1,INSD:BP619307.1,INSD:EL102795.1,
INSD:EL316466.1,INSD:EL146779.1,INSD:AV790404.1,
INSD:EL206218.1,INSD:EL298428.1,INSD:EL125780.1,
INSD:ES146372.1,INSD:EL984223.1,INSD:EH832315.1,
INSD:EL047832.1,INSD:ES104041.1,INSD:EH964696.1,
INSD:ES017292.1,INSD:EL076256.1,INSD:EL991415.1,
INSD:EH855805.1,INSD:BP629021.1,INSD:EL285176.1,
INSD:CB257296.1,INSD:EL096119.1,INSD:F15384.1,
INSD:BP781050.1,INSD:ES075812.1,INSD:BP779614.1,
INSD:BE525748.1,INSD:ES209198.1,INSD:ES200162.1,
INSD:EH915466.1,INSD:EH980282.1,INSD:EL194582.1,
INSD:ES194526.1,INSD:F15566.1,INSD:AV560755.1,
INSD:AV820179.1,INSD:EH844827.1,INSD:EL305928.1,
INSD:EL990950.1,INSD:EL181989.1,INSD:ES211342.1,
INSD:AV815875.1,INSD:EL046639.1,INSD:ES015536.1,
INSD:ES135571.1,INSD:EH864482.1,INSD:EL029536.1"
/inference="Similar to RNA sequence,
mRNA:INSD:AY195621.1,INSD:BT020379.1"
/note="INDUCER OF CBF EXPRESSION 1 (ICE1); CONTAINS
InterPro DOMAIN/s: Helix-loop-helix DNA-binding domain
(InterPro:IPR001092), Helix-loop-helix DNA-binding
(InterPro:IPR011598); BEST Arabidopsis thaliana protein
match is: basic helix-loop-helix (bHLH) DNA-binding
superfamily protein (TAIR:AT1G12860.1); Has 2623 Blast
hits to 2616 proteins in 144 species: Archae - 0; Bacteria
- 0; Metazoa - 19; Fungi - 30; Plants - 2572; Viruses - 0;
Other Eukaryotes - 2 (source: NCBI BLink)."
/db_xref="TAIR:AT3G26744"
/db_xref="Araport:AT3G26744"
intron_pos 336:0 (1/3)
intron_pos 411:0 (2/3)
intron_pos 468:0 (3/3)
BEGIN
1 MGLDGNNGGG VWLNGGGGER EENEEGSWGR NQEDGSSQFK PMLEGDWFSS NQPHPQDLQM
61 LQNQPDFRYF GGFPFNPNDN LLLQHSIDSS SSCSPSQAFS LDPSQQNQFL STNNNKGCLL
121 NVPSSANPFD NAFEFGSESG FLNQIHAPIS MGFGSLTQLG NRDLSSVPDF LSARSLLAPE
181 SNNNNTMLCG GFTAPLELEG FGSPANGGFV GNRAKVLKPL EVLASSGAQP TLFQKRAAMR
241 QSSGSKMGNS ESSGMRRFSD DGDMDETGIE VSGLNYESDE INESGKAAES VQIGGGGKGK
301 KKGMPAKNLM AERRRRKKLN DRLYMLRSVV PKISKMDRAS ILGDAIDYLK ELLQRINDLH
361 NELESTPPGS LPPTSSSFHP LTPTPQTLSC RVKEELCPSS LPSPKGQQAR VEVRLREGRA
421 VNIHMFCGRR PGLLLATMKA LDNLGLDVQQ AVISCFNGFA LDVFRAEQCQ EGQEILPDQI
481 KAVLFDTAGY AGMI
//