LOCUS AEE77205.1 772 aa PRT PLN 23-MAR-2023
DEFINITION Arabidopsis thaliana RING/U-box superfamily protein protein.
ACCESSION CP002686-4982
PROTEIN_ID AEE77205.1
SOURCE Arabidopsis thaliana (thale cress)
ORGANISM Arabidopsis thaliana
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
Pentapetalae; rosids; malvids; Brassicales; Brassicaceae;
Camelineae; Arabidopsis.
REFERENCE 1 (bases 1 to 23459830)
AUTHORS Salanoubat,M., Lemcke,K., Rieger,M., Ansorge,W., Unseld,M.,
Fartmann,B., Valle,G., Blocker,H., Perez-Alonso,M., Obermaier,B.,
Delseny,M., Boutry,M., Grivell,L.A., Mache,R., Puigdomenech,P., De
Simone,V., Choisne,N., Artiguenave,F., Robert,C., Brottier,P.,
Wincker,P., Cattolico,L., Weissenbach,J., Saurin,W., Quetier,F.,
Schafer,M., Muller-Auer,S., Gabel,C., Fuchs,M., Benes,V.,
Wurmbach,E., Drzonek,H., Erfle,H., Jordan,N., Bangert,S.,
Wiedelmann,R., Kranz,H., Voss,H., Holland,R., Brandt,P.,
Nyakatura,G., Vezzi,A., D'Angelo,M., Pallavicini,A., Toppo,S.,
Simionati,B., Conrad,A., Hornischer,K., Kauer,G., Lohnert,T.H.,
Nordsiek,G., Reichelt,J., Scharfe,M., Schon,O., Bargues,M.,
Terol,J., Climent,J., Navarro,P., Collado,C., Perez-Perez,A.,
Ottenwalder,B., Duchemin,D., Cooke,R., Laudie,M., Berger-Llauro,C.,
Purnelle,B., Masuy,D., de Haan,M., Maarse,A.C., Alcaraz,J.P.,
Cottet,A., Casacuberta,E., Monfort,A., Argiriou,A., flores,M.,
Liguori,R., Vitale,D., Mannhaupt,G., Haase,D., Schoof,H., Rudd,S.,
Zaccaria,P., Mewes,H.W., Mayer,K.F., Kaul,S., Town,C.D., Koo,H.L.,
Tallon,L.J., Jenkins,J., Rooney,T., Rizzo,M., Walts,A.,
Utterback,T., Fujii,C.Y., Shea,T.P., Creasy,T.H., Haas,B.,
Maiti,R., Wu,D., Peterson,J., Van Aken,S., Pai,G., Militscher,J.,
Sellers,P., Gill,J.E., Feldblyum,T.V., Preuss,D., Lin,X.,
Nierman,W.C., Salzberg,S.L., White,O., Venter,J.C., Fraser,C.M.,
Kaneko,T., Nakamura,Y., Sato,S., Kato,T., Asamizu,E., Sasamoto,S.,
Kimura,T., Idesawa,K., Kawashima,K., Kishida,Y., Kiyokawa,C.,
Kohara,M., Matsumoto,M., Matsuno,A., Muraki,A., Nakayama,S.,
Nakazaki,N., Shinpo,S., Takeuchi,C., Wada,T., Watanabe,A.,
Yamada,M., Yasuda,M. and Tabata,S.
CONSRTM European Union Chromosome 3 Arabidopsis Sequencing Consortium;
Institute for Genomic Research; Kazusa DNA Research Institute
TITLE Sequence and analysis of chromosome 3 of the plant Arabidopsis
thaliana
JOURNAL Nature 408 (6814), 820-822 (2000)
PUBMED 11130713
REFERENCE 2 (bases 1 to 23459830)
AUTHORS Swarbreck,D., Lamesch,P., Wilks,C. and Huala,E.
CONSRTM TAIR
TITLE Direct Submission
JOURNAL Submitted (18-FEB-2011) Department of Plant Biology, Carnegie
Institution, 260 Panama Street, Stanford, CA, USA
REFERENCE 3 (bases 1 to 23459830)
AUTHORS Krishnakumar,V., Cheng,C.-Y., Chan,A.P., Schobel,S., Kim,M.,
Ferlanti,E.S., Belyaeva,I., Rosen,B.D., Micklem,G., Miller,J.R.,
Vaughn,M. and Town,C.D.
TITLE Direct Submission
JOURNAL Submitted (17-MAY-2016) Plant Genomics, J. Craig Venter Institute,
9704 Medical Center Dr, Rockville, MD 20850, USA
REMARK Protein update by submitter
FEATURES Qualifiers
source /organism="Arabidopsis thaliana"
/mol_type="genomic DNA"
/db_xref="taxon:3702"
/chromosome="3"
/ecotype="Columbia"
protein /locus_tag="AT3G26730"
/inference="Similar to RNA sequence,
EST:INSD:BP796102.1,INSD:ES019008.1,INSD:EL292607.1,
INSD:EL233648.1,INSD:BP808640.1,INSD:BP615121.1,
INSD:EL259238.1,INSD:ES208359.1,INSD:EL105890.1,
INSD:EL238165.1,INSD:EL278155.1,INSD:DR383475.1,
INSD:EL190304.1,INSD:EH942698.1,INSD:ES139565.1,
INSD:BP610462.1,INSD:EH912508.1,INSD:BP795959.1,
INSD:AI992953.1,INSD:EL091553.1,INSD:BP621595.1,
INSD:AV528966.1,INSD:EL307837.1,INSD:CB256798.1,
INSD:CB256794.1,INSD:EL018562.1,INSD:DR314496.1,
INSD:AV527492.1,INSD:EH918748.1,INSD:ES008464.1,
INSD:EL201961.1,INSD:BP599867.1,INSD:EL099382.1,
INSD:BE521171.1,INSD:BP821630.1,INSD:EH984013.1,
INSD:BP828078.1,INSD:EL286226.1,INSD:AV523314.1,
INSD:ES079511.1,INSD:EL215107.1,INSD:ES162734.1,
INSD:EL177786.1,INSD:EL240890.1,INSD:EL300876.1,
INSD:ES172923.1,INSD:BE521172.1,INSD:EL179001.1,
INSD:EH881290.1,INSD:BP837208.1,INSD:AV812523.1,
INSD:EL264909.1,INSD:ES195004.1,INSD:AA395046.1,
INSD:ES082551.1,INSD:EL129403.1,INSD:EL165131.1,
INSD:EL145687.1,INSD:EL042080.1,INSD:EH809419.1,
INSD:BP633972.1,INSD:BP827118.1,INSD:EH918433.1,
INSD:T43095.1,INSD:BP846867.1,INSD:EL069188.1,
INSD:AV830674.1,INSD:DR372611.1,INSD:DR369543.1,
INSD:EH879971.1,INSD:BP792419.1,INSD:EH843315.1,
INSD:BE526328.1,INSD:EH908058.1"
/inference="Similar to RNA sequence,
mRNA:INSD:AY074325.1,INSD:BT003004.1"
/note="RING/U-box superfamily protein; FUNCTIONS IN: zinc
ion binding; INVOLVED IN: biological_process unknown;
LOCATED IN: chloroplast; EXPRESSED IN: 25 plant
structures; EXPRESSED DURING: 15 growth stages; CONTAINS
InterPro DOMAIN/s: Zinc finger, RING-type, conserved site
(InterPro:IPR017907), Zinc finger, RING-type
(InterPro:IPR001841); Has 5292 Blast hits to 2238 proteins
in 281 species: Archae - 3; Bacteria - 121; Metazoa -
1602; Fungi - 487; Plants - 437; Viruses - 6; Other
Eukaryotes - 2636 (source: NCBI BLink)."
/db_xref="TAIR:AT3G26730"
/db_xref="Araport:AT3G26730"
intron_pos 72:1 (1/8)
intron_pos 89:0 (2/8)
intron_pos 526:0 (3/8)
intron_pos 555:2 (4/8)
intron_pos 590:0 (5/8)
intron_pos 625:0 (6/8)
intron_pos 666:1 (7/8)
intron_pos 725:1 (8/8)
BEGIN
1 MSILPPPIIQ GHNSSSPSSD SSLNPSSEHG NNSSSSLSPL PSSPPSRISS STGTRFSGHS
61 ESSHNFSGGS REPSVAAEEG HSRGSSKEMT QNGAGKESFS PPNADKRDHF RYDGRRNRSR
121 GRGTGAAGSS SSQLQHNSGP FNSPRGGVSH HNPTGRRANM ISGNHLLNFQ YDPISQPQSR
181 GPPPPQRRQQ YKGRPFNKDL FLKANYKFVV LDTGDHSPDS MDPDKMLQWD DIICVRYSTP
241 SPVQCPICLE YPLCPQITSC GHIFCFPCIL QYLLTGVDNH KVDCFKRCPL CFVMISPREL
301 YTVYIENVKQ YSVGDPIEFV LLTRKKDSFA PTRKNEHDLA VPNGENEIYD PFSKFTFTQD
361 VDLSVRQAVS ELDSWIARAD PQLVEDLEKH LYVNAALERL EQRKLYWNEH KLSIYSKVCT
421 TARNQTQSLS PPDVSRVGYQ APMGGHGAPD SGSNDQDKST EDSSADKSDG ESQSSLEKGC
481 DNDLGHPLED QDAPSSSSCN GSKGFLSHQI DTKDLKDNDA YNFYQSVDGQ HIILHTLNVK
541 CLLHHYGSYD FLPPRLSGKI LEMETITQSE AIRRRYRFLS HFSLSTTLQI CEIDMKESLP
601 PDAFAPFIHE IKKREKQRKE RAWKDRKNKI KAEVAAAAEL VPLMASFGQS SSSDDFPPFS
661 LDDFEALGNS APISSSPPNI GERSSFSHVT RLGFAAGHDS PNLNNEPTNV QSSSSSSEVS
721 NATTGARNTN ITSFASVASR TTTPMAPTVK EPGKRGKKQS RVLLSTTSVR RY
//