LOCUS AEE77204.1 943 aa PRT PLN 23-MAR-2023
DEFINITION Arabidopsis thaliana Glycosyl hydrolase family 38 protein protein.
ACCESSION CP002686-4978
PROTEIN_ID AEE77204.1
SOURCE Arabidopsis thaliana (thale cress)
ORGANISM Arabidopsis thaliana
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
Pentapetalae; rosids; malvids; Brassicales; Brassicaceae;
Camelineae; Arabidopsis.
REFERENCE 1 (bases 1 to 23459830)
AUTHORS Salanoubat,M., Lemcke,K., Rieger,M., Ansorge,W., Unseld,M.,
Fartmann,B., Valle,G., Blocker,H., Perez-Alonso,M., Obermaier,B.,
Delseny,M., Boutry,M., Grivell,L.A., Mache,R., Puigdomenech,P., De
Simone,V., Choisne,N., Artiguenave,F., Robert,C., Brottier,P.,
Wincker,P., Cattolico,L., Weissenbach,J., Saurin,W., Quetier,F.,
Schafer,M., Muller-Auer,S., Gabel,C., Fuchs,M., Benes,V.,
Wurmbach,E., Drzonek,H., Erfle,H., Jordan,N., Bangert,S.,
Wiedelmann,R., Kranz,H., Voss,H., Holland,R., Brandt,P.,
Nyakatura,G., Vezzi,A., D'Angelo,M., Pallavicini,A., Toppo,S.,
Simionati,B., Conrad,A., Hornischer,K., Kauer,G., Lohnert,T.H.,
Nordsiek,G., Reichelt,J., Scharfe,M., Schon,O., Bargues,M.,
Terol,J., Climent,J., Navarro,P., Collado,C., Perez-Perez,A.,
Ottenwalder,B., Duchemin,D., Cooke,R., Laudie,M., Berger-Llauro,C.,
Purnelle,B., Masuy,D., de Haan,M., Maarse,A.C., Alcaraz,J.P.,
Cottet,A., Casacuberta,E., Monfort,A., Argiriou,A., flores,M.,
Liguori,R., Vitale,D., Mannhaupt,G., Haase,D., Schoof,H., Rudd,S.,
Zaccaria,P., Mewes,H.W., Mayer,K.F., Kaul,S., Town,C.D., Koo,H.L.,
Tallon,L.J., Jenkins,J., Rooney,T., Rizzo,M., Walts,A.,
Utterback,T., Fujii,C.Y., Shea,T.P., Creasy,T.H., Haas,B.,
Maiti,R., Wu,D., Peterson,J., Van Aken,S., Pai,G., Militscher,J.,
Sellers,P., Gill,J.E., Feldblyum,T.V., Preuss,D., Lin,X.,
Nierman,W.C., Salzberg,S.L., White,O., Venter,J.C., Fraser,C.M.,
Kaneko,T., Nakamura,Y., Sato,S., Kato,T., Asamizu,E., Sasamoto,S.,
Kimura,T., Idesawa,K., Kawashima,K., Kishida,Y., Kiyokawa,C.,
Kohara,M., Matsumoto,M., Matsuno,A., Muraki,A., Nakayama,S.,
Nakazaki,N., Shinpo,S., Takeuchi,C., Wada,T., Watanabe,A.,
Yamada,M., Yasuda,M. and Tabata,S.
CONSRTM European Union Chromosome 3 Arabidopsis Sequencing Consortium;
Institute for Genomic Research; Kazusa DNA Research Institute
TITLE Sequence and analysis of chromosome 3 of the plant Arabidopsis
thaliana
JOURNAL Nature 408 (6814), 820-822 (2000)
PUBMED 11130713
REFERENCE 2 (bases 1 to 23459830)
AUTHORS Swarbreck,D., Lamesch,P., Wilks,C. and Huala,E.
CONSRTM TAIR
TITLE Direct Submission
JOURNAL Submitted (18-FEB-2011) Department of Plant Biology, Carnegie
Institution, 260 Panama Street, Stanford, CA, USA
REFERENCE 3 (bases 1 to 23459830)
AUTHORS Krishnakumar,V., Cheng,C.-Y., Chan,A.P., Schobel,S., Kim,M.,
Ferlanti,E.S., Belyaeva,I., Rosen,B.D., Micklem,G., Miller,J.R.,
Vaughn,M. and Town,C.D.
TITLE Direct Submission
JOURNAL Submitted (17-MAY-2016) Plant Genomics, J. Craig Venter Institute,
9704 Medical Center Dr, Rockville, MD 20850, USA
REMARK Protein update by submitter
FEATURES Qualifiers
source /organism="Arabidopsis thaliana"
/mol_type="genomic DNA"
/db_xref="taxon:3702"
/chromosome="3"
/ecotype="Columbia"
protein /locus_tag="AT3G26720"
/inference="Similar to RNA sequence,
EST:INSD:EL255064.1,INSD:ES021947.1,INSD:EL062532.1,
INSD:CK118694.1,INSD:DR355853.1,INSD:ES138385.1,
INSD:EL267861.1,INSD:EL177928.1,INSD:EL247145.1,
INSD:ES010921.1,INSD:BP808964.1,INSD:AV529226.1,
INSD:BP805035.1,INSD:EG529315.1,INSD:BP808017.1,
INSD:EG428758.1,INSD:AV529772.1,INSD:BP811256.1,
INSD:EH890418.1,INSD:ES122800.1,INSD:ES012334.1,
INSD:EG529316.1,INSD:BP805386.1,INSD:AV821365.1,
INSD:DR259651.1,INSD:ES126905.1,INSD:EL322241.1,
INSD:BP811013.1,INSD:DR359428.1,INSD:ES003874.1,
INSD:BP809064.1"
/note="Glycosyl hydrolase family 38 protein; FUNCTIONS IN:
in 6 functions; INVOLVED IN: mannose metabolic process,
carbohydrate metabolic process; LOCATED IN: plasma
membrane, plant-type cell wall; EXPRESSED IN: 25 plant
structures; EXPRESSED DURING: 13 growth stages; CONTAINS
InterPro DOMAIN/s: Glycoside hydrolase-type
carbohydrate-binding (InterPro:IPR011013), Glycoside
hydrolase/deacetylase, beta/alpha-barrel
(InterPro:IPR011330), Glycoside hydrolase, family 38,
central domain (InterPro:IPR015341), Glycoside hydrolase,
family 38, core (InterPro:IPR000602), Glycosyl hydrolases
38, C-terminal (InterPro:IPR011682); BEST Arabidopsis
thaliana protein match is: Glycosyl hydrolase family 38
protein (TAIR:AT5G13980.2); Has 30201 Blast hits to 17322
proteins in 780 species: Archae - 12; Bacteria - 1396;
Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0;
Other Eukaryotes - 2996 (source: NCBI BLink)."
/db_xref="TAIR:AT3G26720"
/db_xref="Araport:AT3G26720"
intron_pos 69:0 (1/28)
intron_pos 97:0 (2/28)
intron_pos 126:2 (3/28)
intron_pos 185:0 (4/28)
intron_pos 225:0 (5/28)
intron_pos 253:0 (6/28)
intron_pos 277:0 (7/28)
intron_pos 315:0 (8/28)
intron_pos 348:2 (9/28)
intron_pos 380:0 (10/28)
intron_pos 436:0 (11/28)
intron_pos 466:0 (12/28)
intron_pos 488:0 (13/28)
intron_pos 507:0 (14/28)
intron_pos 580:1 (15/28)
intron_pos 625:0 (16/28)
intron_pos 646:0 (17/28)
intron_pos 666:0 (18/28)
intron_pos 690:0 (19/28)
intron_pos 706:0 (20/28)
intron_pos 746:0 (21/28)
intron_pos 768:0 (22/28)
intron_pos 805:2 (23/28)
intron_pos 834:0 (24/28)
intron_pos 871:0 (25/28)
intron_pos 903:0 (26/28)
intron_pos 919:0 (27/28)
intron_pos 942:0 (28/28)
BEGIN
1 MAVKCFSLYL ILAAIVIGGV TSEYIEYNTK PRIVPEKINV HLVPHSHDDV GWLKTVDQYY
61 VGSNNSIRGA CVQNVLDSVI ASLLDDENRK FIYVEMAFFQ RWWRQQSNAK KVKVKKLVDS
121 GQLEFINGGM CMHDEATPHY IDMIDQTTLG HQFIKTEFGQ VPRVGWQIDP FGHSAVQAYL
181 LGAEFGFDSL FFARIDYQDR AKRLREKTLE VIWQGSKSLG SSSQIFTGVF PRHYDPPEGF
241 TFEINDVSAP IQDDPLLFDY NVQERVNDFV AAALAQVNVT RTNHIMWLMG TDFRYQYAYS
301 WFRQIDKFIH YVNKDGRLNV LYSTPSIYTD AKYAANESWP LKTDDFFPYA DKPNAYWTGY
361 FTSRPAFKKY VRDLSGYYLA ARQLEFLRGR DSSGPTTDML ADALAIAQHH DAVSGTQRQH
421 VAADYALRLS MGYLQAEKLV ASSLSFLSAA KSSTEKKNPG TKFQQCPLLN ISYCPASEAR
481 LLSGKSLVVV VYNSLGWKRE EVVRVPVSSE NVIVKDASGK EVVFQLLPLS EIALRIRNEY
541 VKAYLGRSPR DTAKHVLAFT ASVPPLGFSS YVISDTGRTA RGLSASYVTS GSMNQNVEVG
601 QGNLKLRYSE EGVKITRHLS TKNQVTAEQS YAYYIGSNGT DKDPQASGAY VFRPDGVLPI
661 KSKEEAQLTI VQGPLFDEVH QELNSWISQI TRVYKGKNHA EIEFTIGPIP ADDGISKEII
721 TKLTTTMKTN GTFYTDSNGR DFIKRIRDFR TDWDLQVYQP VAGNYYPLNL GIYMQDKTSE
781 LSVLVDRAVG GSSLENGQIE LMLHRRMQHD DIRGVGEILN ETVCLPEGCK GLTIQGKFYV
841 QIDKPGDGAK WRRTFGQEIY SPLLIAFTEQ EGDSWINSHK TTFSAFEPSY SLPKNVALLT
901 LQELENGEVL LRLAHLFEVG EDSEYSVMAK VELKKLFHNK KRS
//