LOCUS AEE77190.1 346 aa PRT PLN 23-MAR-2023
DEFINITION Arabidopsis thaliana Transducin/WD40 repeat-like superfamily
protein protein.
ACCESSION CP002686-4958
PROTEIN_ID AEE77190.1
SOURCE Arabidopsis thaliana (thale cress)
ORGANISM Arabidopsis thaliana
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
Pentapetalae; rosids; malvids; Brassicales; Brassicaceae;
Camelineae; Arabidopsis.
REFERENCE 1 (bases 1 to 23459830)
AUTHORS Salanoubat,M., Lemcke,K., Rieger,M., Ansorge,W., Unseld,M.,
Fartmann,B., Valle,G., Blocker,H., Perez-Alonso,M., Obermaier,B.,
Delseny,M., Boutry,M., Grivell,L.A., Mache,R., Puigdomenech,P., De
Simone,V., Choisne,N., Artiguenave,F., Robert,C., Brottier,P.,
Wincker,P., Cattolico,L., Weissenbach,J., Saurin,W., Quetier,F.,
Schafer,M., Muller-Auer,S., Gabel,C., Fuchs,M., Benes,V.,
Wurmbach,E., Drzonek,H., Erfle,H., Jordan,N., Bangert,S.,
Wiedelmann,R., Kranz,H., Voss,H., Holland,R., Brandt,P.,
Nyakatura,G., Vezzi,A., D'Angelo,M., Pallavicini,A., Toppo,S.,
Simionati,B., Conrad,A., Hornischer,K., Kauer,G., Lohnert,T.H.,
Nordsiek,G., Reichelt,J., Scharfe,M., Schon,O., Bargues,M.,
Terol,J., Climent,J., Navarro,P., Collado,C., Perez-Perez,A.,
Ottenwalder,B., Duchemin,D., Cooke,R., Laudie,M., Berger-Llauro,C.,
Purnelle,B., Masuy,D., de Haan,M., Maarse,A.C., Alcaraz,J.P.,
Cottet,A., Casacuberta,E., Monfort,A., Argiriou,A., flores,M.,
Liguori,R., Vitale,D., Mannhaupt,G., Haase,D., Schoof,H., Rudd,S.,
Zaccaria,P., Mewes,H.W., Mayer,K.F., Kaul,S., Town,C.D., Koo,H.L.,
Tallon,L.J., Jenkins,J., Rooney,T., Rizzo,M., Walts,A.,
Utterback,T., Fujii,C.Y., Shea,T.P., Creasy,T.H., Haas,B.,
Maiti,R., Wu,D., Peterson,J., Van Aken,S., Pai,G., Militscher,J.,
Sellers,P., Gill,J.E., Feldblyum,T.V., Preuss,D., Lin,X.,
Nierman,W.C., Salzberg,S.L., White,O., Venter,J.C., Fraser,C.M.,
Kaneko,T., Nakamura,Y., Sato,S., Kato,T., Asamizu,E., Sasamoto,S.,
Kimura,T., Idesawa,K., Kawashima,K., Kishida,Y., Kiyokawa,C.,
Kohara,M., Matsumoto,M., Matsuno,A., Muraki,A., Nakayama,S.,
Nakazaki,N., Shinpo,S., Takeuchi,C., Wada,T., Watanabe,A.,
Yamada,M., Yasuda,M. and Tabata,S.
CONSRTM European Union Chromosome 3 Arabidopsis Sequencing Consortium;
Institute for Genomic Research; Kazusa DNA Research Institute
TITLE Sequence and analysis of chromosome 3 of the plant Arabidopsis
thaliana
JOURNAL Nature 408 (6814), 820-822 (2000)
PUBMED 11130713
REFERENCE 2 (bases 1 to 23459830)
AUTHORS Swarbreck,D., Lamesch,P., Wilks,C. and Huala,E.
CONSRTM TAIR
TITLE Direct Submission
JOURNAL Submitted (18-FEB-2011) Department of Plant Biology, Carnegie
Institution, 260 Panama Street, Stanford, CA, USA
REFERENCE 3 (bases 1 to 23459830)
AUTHORS Krishnakumar,V., Cheng,C.-Y., Chan,A.P., Schobel,S., Kim,M.,
Ferlanti,E.S., Belyaeva,I., Rosen,B.D., Micklem,G., Miller,J.R.,
Vaughn,M. and Town,C.D.
TITLE Direct Submission
JOURNAL Submitted (17-MAY-2016) Plant Genomics, J. Craig Venter Institute,
9704 Medical Center Dr, Rockville, MD 20850, USA
REMARK Protein update by submitter
FEATURES Qualifiers
source /organism="Arabidopsis thaliana"
/mol_type="genomic DNA"
/db_xref="taxon:3702"
/chromosome="3"
/ecotype="Columbia"
protein /gene="LWD2"
/locus_tag="AT3G26640"
/gene_synonym="LIGHT-REGULATED WD 2"
/inference="Similar to RNA sequence,
EST:INSD:EL065401.1,INSD:ES116936.1,INSD:DR359069.1,
INSD:DR223641.1,INSD:EH913296.1,INSD:DR223644.1,
INSD:EL281241.1,INSD:BP807806.1,INSD:DR223643.1,
INSD:ES114610.1,INSD:ES185751.1,INSD:EH994970.1,
INSD:DR223640.1,INSD:DR359068.1,INSD:EH928892.1,
INSD:AI997440.1,INSD:ES060779.1,INSD:AU227770.1,
INSD:EL329919.1,INSD:EL249059.1,INSD:ES093600.1,
INSD:ES116102.1,INSD:BP619955.1,INSD:ES076143.1,
INSD:DR359070.1,INSD:ES101028.1,INSD:DR381784.1,
INSD:ES018527.1,INSD:EH920774.1,INSD:DR223645.1,
INSD:AU236786.1,INSD:EL185562.1,INSD:EL139129.1,
INSD:ES131398.1,INSD:EL999501.1,INSD:EL014089.1,
INSD:EL256732.1,INSD:EL341557.1,INSD:ES031777.1,
INSD:ES194771.1,INSD:DR373423.1,INSD:EH863128.1,
INSD:DR223642.1,INSD:EL161480.1,INSD:EL075470.1,
INSD:EL307215.1,INSD:CB255494.1,INSD:EH978453.1"
/inference="Similar to RNA sequence,
mRNA:INSD:BT004214.1,INSD:BT020361.1,INSD:X97488.1,
INSD:AY086141.1,INSD:BT011948.1"
/note="LIGHT-REGULATED WD 2 (LWD2); CONTAINS InterPro
DOMAIN/s: WD40 repeat 2 (InterPro:IPR019782), WD40
repeat-like-containing domain (InterPro:IPR011046), WD40
repeat, conserved site (InterPro:IPR019775),
WD40-repeat-containing domain (InterPro:IPR017986),
WD40/YVTN repeat-like-containing domain
(InterPro:IPR015943), WD40 repeat (InterPro:IPR001680),
WD40 repeat, subgroup (InterPro:IPR019781); BEST
Arabidopsis thaliana protein match is: Transducin/WD40
repeat-like superfamily protein (TAIR:AT1G12910.1); Has
5639 Blast hits to 5196 proteins in 384 species: Archae -
6; Bacteria - 320; Metazoa - 2319; Fungi - 1389; Plants -
885; Viruses - 0; Other Eukaryotes - 720 (source: NCBI
BLink)."
/db_xref="TAIR:AT3G26640"
/db_xref="Araport:AT3G26640"
BEGIN
1 MVTSSDQIQN GSEEQSKRSE IYTYEAPWQI YAMNWSIRRD KKYRLAITSL IEQYPNRVEI
61 VQLDESNGEI RSDPNLCFEH PYPPTKTSFI PDKECQRPDL LATSSDFLRL WRISDDESRV
121 ELKSCLSSDK NSEFSGPITS FDWNEAEPRR IGTSSIDTTC TIWDIEREVV DTQLIAHDKE
181 VYDIAWGGVG VFASVSEDGS VRVFDLRDKE HSTIIYESGE PSTPLVRLSW NKQDPRYMAT
241 VIMGSAKIVV LDIRFPALPV VELQRHQASV NAIAWAPHSS SHICSAGDDS QALIWDISSM
301 GQHVEGGLDP ILAYTAGAEV EQLQWSSSQP DWVAIAFSNK LQILRV
//