LOCUS AEE77096.1 701 aa PRT PLN 23-MAR-2023
DEFINITION Arabidopsis thaliana Pentatricopeptide repeat (PPR) superfamily
protein protein.
ACCESSION CP002686-4824
PROTEIN_ID AEE77096.1
SOURCE Arabidopsis thaliana (thale cress)
ORGANISM Arabidopsis thaliana
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
Pentapetalae; rosids; malvids; Brassicales; Brassicaceae;
Camelineae; Arabidopsis.
REFERENCE 1 (bases 1 to 23459830)
AUTHORS Salanoubat,M., Lemcke,K., Rieger,M., Ansorge,W., Unseld,M.,
Fartmann,B., Valle,G., Blocker,H., Perez-Alonso,M., Obermaier,B.,
Delseny,M., Boutry,M., Grivell,L.A., Mache,R., Puigdomenech,P., De
Simone,V., Choisne,N., Artiguenave,F., Robert,C., Brottier,P.,
Wincker,P., Cattolico,L., Weissenbach,J., Saurin,W., Quetier,F.,
Schafer,M., Muller-Auer,S., Gabel,C., Fuchs,M., Benes,V.,
Wurmbach,E., Drzonek,H., Erfle,H., Jordan,N., Bangert,S.,
Wiedelmann,R., Kranz,H., Voss,H., Holland,R., Brandt,P.,
Nyakatura,G., Vezzi,A., D'Angelo,M., Pallavicini,A., Toppo,S.,
Simionati,B., Conrad,A., Hornischer,K., Kauer,G., Lohnert,T.H.,
Nordsiek,G., Reichelt,J., Scharfe,M., Schon,O., Bargues,M.,
Terol,J., Climent,J., Navarro,P., Collado,C., Perez-Perez,A.,
Ottenwalder,B., Duchemin,D., Cooke,R., Laudie,M., Berger-Llauro,C.,
Purnelle,B., Masuy,D., de Haan,M., Maarse,A.C., Alcaraz,J.P.,
Cottet,A., Casacuberta,E., Monfort,A., Argiriou,A., flores,M.,
Liguori,R., Vitale,D., Mannhaupt,G., Haase,D., Schoof,H., Rudd,S.,
Zaccaria,P., Mewes,H.W., Mayer,K.F., Kaul,S., Town,C.D., Koo,H.L.,
Tallon,L.J., Jenkins,J., Rooney,T., Rizzo,M., Walts,A.,
Utterback,T., Fujii,C.Y., Shea,T.P., Creasy,T.H., Haas,B.,
Maiti,R., Wu,D., Peterson,J., Van Aken,S., Pai,G., Militscher,J.,
Sellers,P., Gill,J.E., Feldblyum,T.V., Preuss,D., Lin,X.,
Nierman,W.C., Salzberg,S.L., White,O., Venter,J.C., Fraser,C.M.,
Kaneko,T., Nakamura,Y., Sato,S., Kato,T., Asamizu,E., Sasamoto,S.,
Kimura,T., Idesawa,K., Kawashima,K., Kishida,Y., Kiyokawa,C.,
Kohara,M., Matsumoto,M., Matsuno,A., Muraki,A., Nakayama,S.,
Nakazaki,N., Shinpo,S., Takeuchi,C., Wada,T., Watanabe,A.,
Yamada,M., Yasuda,M. and Tabata,S.
CONSRTM European Union Chromosome 3 Arabidopsis Sequencing Consortium;
Institute for Genomic Research; Kazusa DNA Research Institute
TITLE Sequence and analysis of chromosome 3 of the plant Arabidopsis
thaliana
JOURNAL Nature 408 (6814), 820-822 (2000)
PUBMED 11130713
REFERENCE 2 (bases 1 to 23459830)
AUTHORS Swarbreck,D., Lamesch,P., Wilks,C. and Huala,E.
CONSRTM TAIR
TITLE Direct Submission
JOURNAL Submitted (18-FEB-2011) Department of Plant Biology, Carnegie
Institution, 260 Panama Street, Stanford, CA, USA
REFERENCE 3 (bases 1 to 23459830)
AUTHORS Krishnakumar,V., Cheng,C.-Y., Chan,A.P., Schobel,S., Kim,M.,
Ferlanti,E.S., Belyaeva,I., Rosen,B.D., Micklem,G., Miller,J.R.,
Vaughn,M. and Town,C.D.
TITLE Direct Submission
JOURNAL Submitted (17-MAY-2016) Plant Genomics, J. Craig Venter Institute,
9704 Medical Center Dr, Rockville, MD 20850, USA
REMARK Protein update by submitter
FEATURES Qualifiers
source /organism="Arabidopsis thaliana"
/mol_type="genomic DNA"
/db_xref="taxon:3702"
/chromosome="3"
/ecotype="Columbia"
protein /locus_tag="AT3G25970"
/inference="Similar to RNA sequence,
EST:INSD:ES013652.1,INSD:EL991322.1"
/note="Pentatricopeptide repeat (PPR) superfamily protein;
INVOLVED IN: biological_process unknown; LOCATED IN:
endomembrane system; EXPRESSED IN: 10 plant structures;
EXPRESSED DURING: 4 anthesis, F mature embryo stage, petal
differentiation and expansion stage, E expanded cotyledon
stage, D bilateral stage; CONTAINS InterPro DOMAIN/s:
Pentatricopeptide repeat (InterPro:IPR002885); BEST
Arabidopsis thaliana protein match is: Pentatricopeptide
repeat (PPR) superfamily protein (TAIR:AT4G13650.1); Has
41202 Blast hits to 13044 proteins in 247 species: Archae
- 0; Bacteria - 0; Metazoa - 129; Fungi - 58; Plants -
40527; Viruses - 0; Other Eukaryotes - 488 (source: NCBI
BLink)."
/db_xref="TAIR:AT3G25970"
/db_xref="Araport:AT3G25970"
BEGIN
1 MKALLASLLE SSLNSFQKLS LTHCYAIKCG SISDIYVSNR ILDSYIKFGF LGYANMLFDE
61 MPKRDSVSWN TMISGYTSCG KLEDAWCLFT CMKRSGSDVD GYSFSRLLKG IASVKRFDLG
121 EQVHGLVIKG GYECNVYVGS SLVDMYAKCE RVEDAFEAFK EISEPNSVSW NALIAGFVQV
181 RDIKTAFWLL GLMEMKAAVT MDAGTFAPLL TLLDDPMFCN LLKQVHAKVL KLGLQHEITI
241 CNAMISSYAD CGSVSDAKRV FDGLGGSKDL ISWNSMIAGF SKHELKESAF ELFIQMQRHW
301 VETDIYTYTG LLSACSGEEH QIFGKSLHGM VIKKGLEQVT SATNALISMY IQFPTGTMED
361 ALSLFESLKS KDLISWNSII TGFAQKGLSE DAVKFFSYLR SSEIKVDDYA FSALLRSCSD
421 LATLQLGQQI HALATKSGFV SNEFVISSLI VMYSKCGIIE SARKCFQQIS SKHSTVAWNA
481 MILGYAQHGL GQVSLDLFSQ MCNQNVKLDH VTFTAILTAC SHTGLIQEGL ELLNLMEPVY
541 KIQPRMEHYA AAVDLLGRAG LVNKAKELIE SMPLNPDPMV LKTFLGVCRA CGEIEMATQV
601 ANHLLEIEPE DHFTYVSLSH MYSDLKKWEE KASVKKMMKE RGVKKVPGWS WIEIRNQVKA
661 FNAEDRSNPL CQDIYMMIKD LTQEMQWLDS DNGVDADSLH A
//