LOCUS AEE77084.1 332 aa PRT PLN 23-MAR-2023
DEFINITION Arabidopsis thaliana Integrase-type DNA-binding superfamily
protein protein.
ACCESSION CP002686-4812
PROTEIN_ID AEE77084.1
SOURCE Arabidopsis thaliana (thale cress)
ORGANISM Arabidopsis thaliana
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
Pentapetalae; rosids; malvids; Brassicales; Brassicaceae;
Camelineae; Arabidopsis.
REFERENCE 1 (bases 1 to 23459830)
AUTHORS Salanoubat,M., Lemcke,K., Rieger,M., Ansorge,W., Unseld,M.,
Fartmann,B., Valle,G., Blocker,H., Perez-Alonso,M., Obermaier,B.,
Delseny,M., Boutry,M., Grivell,L.A., Mache,R., Puigdomenech,P., De
Simone,V., Choisne,N., Artiguenave,F., Robert,C., Brottier,P.,
Wincker,P., Cattolico,L., Weissenbach,J., Saurin,W., Quetier,F.,
Schafer,M., Muller-Auer,S., Gabel,C., Fuchs,M., Benes,V.,
Wurmbach,E., Drzonek,H., Erfle,H., Jordan,N., Bangert,S.,
Wiedelmann,R., Kranz,H., Voss,H., Holland,R., Brandt,P.,
Nyakatura,G., Vezzi,A., D'Angelo,M., Pallavicini,A., Toppo,S.,
Simionati,B., Conrad,A., Hornischer,K., Kauer,G., Lohnert,T.H.,
Nordsiek,G., Reichelt,J., Scharfe,M., Schon,O., Bargues,M.,
Terol,J., Climent,J., Navarro,P., Collado,C., Perez-Perez,A.,
Ottenwalder,B., Duchemin,D., Cooke,R., Laudie,M., Berger-Llauro,C.,
Purnelle,B., Masuy,D., de Haan,M., Maarse,A.C., Alcaraz,J.P.,
Cottet,A., Casacuberta,E., Monfort,A., Argiriou,A., flores,M.,
Liguori,R., Vitale,D., Mannhaupt,G., Haase,D., Schoof,H., Rudd,S.,
Zaccaria,P., Mewes,H.W., Mayer,K.F., Kaul,S., Town,C.D., Koo,H.L.,
Tallon,L.J., Jenkins,J., Rooney,T., Rizzo,M., Walts,A.,
Utterback,T., Fujii,C.Y., Shea,T.P., Creasy,T.H., Haas,B.,
Maiti,R., Wu,D., Peterson,J., Van Aken,S., Pai,G., Militscher,J.,
Sellers,P., Gill,J.E., Feldblyum,T.V., Preuss,D., Lin,X.,
Nierman,W.C., Salzberg,S.L., White,O., Venter,J.C., Fraser,C.M.,
Kaneko,T., Nakamura,Y., Sato,S., Kato,T., Asamizu,E., Sasamoto,S.,
Kimura,T., Idesawa,K., Kawashima,K., Kishida,Y., Kiyokawa,C.,
Kohara,M., Matsumoto,M., Matsuno,A., Muraki,A., Nakayama,S.,
Nakazaki,N., Shinpo,S., Takeuchi,C., Wada,T., Watanabe,A.,
Yamada,M., Yasuda,M. and Tabata,S.
CONSRTM European Union Chromosome 3 Arabidopsis Sequencing Consortium;
Institute for Genomic Research; Kazusa DNA Research Institute
TITLE Sequence and analysis of chromosome 3 of the plant Arabidopsis
thaliana
JOURNAL Nature 408 (6814), 820-822 (2000)
PUBMED 11130713
REFERENCE 2 (bases 1 to 23459830)
AUTHORS Swarbreck,D., Lamesch,P., Wilks,C. and Huala,E.
CONSRTM TAIR
TITLE Direct Submission
JOURNAL Submitted (18-FEB-2011) Department of Plant Biology, Carnegie
Institution, 260 Panama Street, Stanford, CA, USA
REFERENCE 3 (bases 1 to 23459830)
AUTHORS Krishnakumar,V., Cheng,C.-Y., Chan,A.P., Schobel,S., Kim,M.,
Ferlanti,E.S., Belyaeva,I., Rosen,B.D., Micklem,G., Miller,J.R.,
Vaughn,M. and Town,C.D.
TITLE Direct Submission
JOURNAL Submitted (17-MAY-2016) Plant Genomics, J. Craig Venter Institute,
9704 Medical Center Dr, Rockville, MD 20850, USA
REMARK Protein update by submitter
FEATURES Qualifiers
source /organism="Arabidopsis thaliana"
/mol_type="genomic DNA"
/db_xref="taxon:3702"
/chromosome="3"
/ecotype="Columbia"
protein /gene="CRF11"
/locus_tag="AT3G25890"
/gene_synonym="cytokinin response factor 11"
/inference="Similar to RNA sequence,
EST:INSD:BP790202.1,INSD:EL003786.1,INSD:CB256403.1,
INSD:DR749874.1,INSD:EL151009.1,INSD:ES085811.1,
INSD:EL294343.1,INSD:AV525836.1,INSD:EL306956.1,
INSD:EL256658.1,INSD:BP789840.1,INSD:EH844301.1,
INSD:BP856659.1,INSD:EL243493.1,INSD:BP780609.1,
INSD:ES072950.1,INSD:BP858239.1,INSD:DR298184.1,
INSD:BP864295.1,INSD:EH951474.1,INSD:AU229876.1,
INSD:EL304840.1,INSD:DR749875.1,INSD:EL209149.1,
INSD:DR298183.1,INSD:EL057368.1,INSD:BP780255.1,
INSD:BE527775.1,INSD:BE527269.1,INSD:DR379923.1"
/inference="Similar to RNA sequence,
mRNA:INSD:BT029518.1,INSD:AY560877.1"
/note="Integrase-type DNA-binding superfamily protein;
FUNCTIONS IN: DNA binding, sequence-specific DNA binding
transcription factor activity; INVOLVED IN: regulation of
transcription, DNA-dependent; LOCATED IN: nucleus;
EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13
growth stages; CONTAINS InterPro DOMAIN/s: DNA-binding,
integrase-type (InterPro:IPR016177), Pathogenesis-related
transcriptional factor/ERF, DNA-binding
(InterPro:IPR001471); BEST Arabidopsis thaliana protein
match is: Integrase-type DNA-binding superfamily protein
(TAIR:AT1G68550.2); Has 4412 Blast hits to 4412 proteins
in 212 species: Archae - 0; Bacteria - 0; Metazoa - 0;
Fungi - 0; Plants - 4405; Viruses - 0; Other Eukaryotes -
7 (source: NCBI BLink)."
/db_xref="TAIR:AT3G25890"
/db_xref="Araport:AT3G25890"
BEGIN
1 MAERKKRSSI QTNKPNKKPM KKKPFQLNHL PGLSEDLKTM RKLRFVVNDP YATDYSSSEE
61 EERSQRRKRY VCEIDLPFAQ AATQAESESS YCQESNNNGV SKTKISACSK KVLRSKASPV
121 VGRSSTTVSK PVGVRQRKWG KWAAEIRHPI TKVRTWLGTY ETLEQAADAY ATKKLEFDAL
181 AAATSAASSV LSNESGSMIS ASGSSIDLDK KLVDSTLDQQ AGESKKASFD FDFADLQIPE
241 MGCFIDDSFI PNACELDFLL TEENNNQMLD DYCGIDDLDI IGLECDGPSE LPDYDFSDVE
301 IDLGLIGTTI DKYAFVDHIA TTTPTPLNIA CP
//