LOCUS AEE77060.1 282 aa PRT PLN 23-MAR-2023
DEFINITION Arabidopsis thaliana RNA-directed DNA polymerase (reverse
transcriptase)-related family protein protein.
ACCESSION CP002686-4781
PROTEIN_ID AEE77060.1
SOURCE Arabidopsis thaliana (thale cress)
ORGANISM Arabidopsis thaliana
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
Pentapetalae; rosids; malvids; Brassicales; Brassicaceae;
Camelineae; Arabidopsis.
REFERENCE 1 (bases 1 to 23459830)
AUTHORS Salanoubat,M., Lemcke,K., Rieger,M., Ansorge,W., Unseld,M.,
Fartmann,B., Valle,G., Blocker,H., Perez-Alonso,M., Obermaier,B.,
Delseny,M., Boutry,M., Grivell,L.A., Mache,R., Puigdomenech,P., De
Simone,V., Choisne,N., Artiguenave,F., Robert,C., Brottier,P.,
Wincker,P., Cattolico,L., Weissenbach,J., Saurin,W., Quetier,F.,
Schafer,M., Muller-Auer,S., Gabel,C., Fuchs,M., Benes,V.,
Wurmbach,E., Drzonek,H., Erfle,H., Jordan,N., Bangert,S.,
Wiedelmann,R., Kranz,H., Voss,H., Holland,R., Brandt,P.,
Nyakatura,G., Vezzi,A., D'Angelo,M., Pallavicini,A., Toppo,S.,
Simionati,B., Conrad,A., Hornischer,K., Kauer,G., Lohnert,T.H.,
Nordsiek,G., Reichelt,J., Scharfe,M., Schon,O., Bargues,M.,
Terol,J., Climent,J., Navarro,P., Collado,C., Perez-Perez,A.,
Ottenwalder,B., Duchemin,D., Cooke,R., Laudie,M., Berger-Llauro,C.,
Purnelle,B., Masuy,D., de Haan,M., Maarse,A.C., Alcaraz,J.P.,
Cottet,A., Casacuberta,E., Monfort,A., Argiriou,A., flores,M.,
Liguori,R., Vitale,D., Mannhaupt,G., Haase,D., Schoof,H., Rudd,S.,
Zaccaria,P., Mewes,H.W., Mayer,K.F., Kaul,S., Town,C.D., Koo,H.L.,
Tallon,L.J., Jenkins,J., Rooney,T., Rizzo,M., Walts,A.,
Utterback,T., Fujii,C.Y., Shea,T.P., Creasy,T.H., Haas,B.,
Maiti,R., Wu,D., Peterson,J., Van Aken,S., Pai,G., Militscher,J.,
Sellers,P., Gill,J.E., Feldblyum,T.V., Preuss,D., Lin,X.,
Nierman,W.C., Salzberg,S.L., White,O., Venter,J.C., Fraser,C.M.,
Kaneko,T., Nakamura,Y., Sato,S., Kato,T., Asamizu,E., Sasamoto,S.,
Kimura,T., Idesawa,K., Kawashima,K., Kishida,Y., Kiyokawa,C.,
Kohara,M., Matsumoto,M., Matsuno,A., Muraki,A., Nakayama,S.,
Nakazaki,N., Shinpo,S., Takeuchi,C., Wada,T., Watanabe,A.,
Yamada,M., Yasuda,M. and Tabata,S.
CONSRTM European Union Chromosome 3 Arabidopsis Sequencing Consortium;
Institute for Genomic Research; Kazusa DNA Research Institute
TITLE Sequence and analysis of chromosome 3 of the plant Arabidopsis
thaliana
JOURNAL Nature 408 (6814), 820-822 (2000)
PUBMED 11130713
REFERENCE 2 (bases 1 to 23459830)
AUTHORS Swarbreck,D., Lamesch,P., Wilks,C. and Huala,E.
CONSRTM TAIR
TITLE Direct Submission
JOURNAL Submitted (18-FEB-2011) Department of Plant Biology, Carnegie
Institution, 260 Panama Street, Stanford, CA, USA
REFERENCE 3 (bases 1 to 23459830)
AUTHORS Krishnakumar,V., Cheng,C.-Y., Chan,A.P., Schobel,S., Kim,M.,
Ferlanti,E.S., Belyaeva,I., Rosen,B.D., Micklem,G., Miller,J.R.,
Vaughn,M. and Town,C.D.
TITLE Direct Submission
JOURNAL Submitted (17-MAY-2016) Plant Genomics, J. Craig Venter Institute,
9704 Medical Center Dr, Rockville, MD 20850, USA
REMARK Protein update by submitter
FEATURES Qualifiers
source /organism="Arabidopsis thaliana"
/mol_type="genomic DNA"
/db_xref="taxon:3702"
/chromosome="3"
/ecotype="Columbia"
protein /locus_tag="AT3G25720"
/inference="Similar to RNA sequence,
EST:INSD:EG431180.1,INSD:EG431176.1,INSD:EG431122.1,
INSD:EG431167.1,INSD:EG431160.1,INSD:EG431164.1,
INSD:EG431182.1,INSD:EG431168.1,INSD:EG431178.1,
INSD:EG431177.1,INSD:EG431162.1,INSD:EG431165.1,
INSD:EG431166.1,INSD:EG431121.1,INSD:EG431171.1,
INSD:EG431169.1,INSD:EG431172.1,INSD:EG431170.1,
INSD:EG431161.1,INSD:EG431173.1,INSD:EG431120.1,
INSD:EG431181.1"
/note="RNA-directed DNA polymerase (reverse
transcriptase)-related family protein; CONTAINS InterPro
DOMAIN/s: RNA-directed DNA polymerase (reverse
transcriptase), related (InterPro:IPR015706); BEST
Arabidopsis thaliana protein match is: RNA-directed DNA
polymerase (reverse transcriptase)-related family protein
(TAIR:AT4G10613.1); Has 517 Blast hits to 476 proteins in
18 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi -
0; Plants - 517; Viruses - 0; Other Eukaryotes - 0
(source: NCBI BLink)."
/db_xref="TAIR:AT3G25720"
/db_xref="Araport:AT3G25720"
intron_pos 18:1 (1/1)
BEGIN
1 MSPFWVCDYD TIPFLIAVCL PKAEGGLGLR WFSEWNTTLN LKLVWRLFSG GGSLWVDWHR
61 YHHLQGLGDA SVSKFWTSQE LVSDSWNWKC LLRLRPLAER FLRCNIGNGL TARFWTDNWT
121 PFGPLLIHIG AARPNRLRIP IEASVADATQ GISWGLPVSP LCCLCSCAPE TRDHLLLGCS
181 FSKALWSSVQ SRLRLHSLIF LNWAELLLWI RRSSTSAPST LRKLVAHSVV YATWKQRNNM
241 LHNSHHLDPA SVFKIIDRKI INSINARRHK KKFRNLMSFW LI
//